Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <------ZmHOX2a(2)                                                               --------->AGP1                                                               <---------ARR14(2)                    <---------SPL7                             --------->ARR14(2)                    ------>ZmHOX2a(1)                          --------->ARR11(3)               <---------HSFB2a(1)                             <---------ARR11(3)               --------->HSFC1(2)                            ----------->ARR10               <---------HSFC1(2)                     --------->ARR14(2)    <-----------RAV1(1)         --------->HSFB2a(2)   <---------ARR14(2)                         ---- ---------YAB1 --------->HSFB2a(1)                 <---------ANAC55(2)            --------->ANAC58 ------DOF2    <---------ZAT2   ------>ZmHOX2a(1)  --------->ANAC55(2)            --------->ANAC58 -->At4g35610  <---------At4g35610                 <---------ANAC46               --------->ANAC46--- >MYB46(3)     --------->At4g35610     ------->TEIL<---------ANAC58         <----------DOF2      ---- >RAV1(1)   <------ZmHOX2a(1)   <---------HSFB2a(2)<---------ANAC58   --------->ZAT14  --------->MYB46(3)   ttctgaatgttggaggaagctccttacgcttctcctcgatgaacttctgaatcgcgtattggctagatccagttctctctttcaacgtaacaatcgcatc  2077300                                                                 --------->LBD16                                                                <---------RAP2.6(2)                                                               <---------LBD16                                                             --------->GLK1(2)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                <---------ARR14(2)                   ---     ----------->RAV1(2)                                     --------->ARR14(2)                   <--     <---------At4g35610                                    <---------GLK1(2)            --------->ANAC58     --------->At4g35610                                 --------->YAB1                  --------->ANAC58   --------->YAB1                                  --------------->AGL15                 --------->ANAC46  <---------ATHB12                                 <---------------AGL15         --------->ANAC58<--- ----->TOE2(3)                                    ----------------->AGL1         --------->ANAC58<--- --->ZmHOX2a(1)                                   ----------------->AGL3     --------->CCA1(2)   <--- ----->TOE1(3)        ---------->DOF2             ----------------->AGL2 --------->YAB1--------->MYB52(1)   cttaatcatctgaaatcgcatcaacaaagaacacaaaaatcaatttctaaattccaaaatcagaatccggcttaataagaaacacgaataaacgaaatcg  2077400                                                              ----------->RAV1(1)                                                            --------->At4g35610         <-----------GT1                                    <---------At4g35610        <-----------GT1                                     <------NtERF2     <---------ICU4                                        --------->RAP2.6(2) ---->TEIL                                               --------->At4g35610           ------>ZmHOX2a(1) ---------ARR10                                          <------NtERF2                --------->TOE1(3) ------CCA1(2)                                        --------->At4g35610             --------->TOE2(3) ------GLK1(2)                --------->At4g35610     <---------At4g35610     <-----------HVH21 ------ARR14(1)          <------ZmHOX2a(1)       <---------LBD16 ------->GAMYB------>ZmHOX2a(1)   aatctcatttttacctcttcgtaagtaggatgagatgaaacagttctcttcttcggagcggcagcaacagtcttcttctccttcacttccttaacattct  2077500                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                      --------->ATERF1(1)                                                     --------->ABI4(2)                                                     ------>NtERF2                                                  <---------ATERF1(1)                                                  --------->LBD16                                                 <---------DEAR3(1)                                                --------->ATERF1(1)                                                --------->DEAR3(2)                                                <---------LBD16   --------->ALFIN1                                                <---------At4g35610                 --------->ZAT14             ----------->HVH21 <---------DEAR3(1)                 <---------ZAT2             <-----------HVH21 <---------At4g35610                 --------->ZAT2             <-----------TGA1  --------->At4g35610                 --------->At4g35610       --------->ANAC46   <------NtERF2              --------->At4g35610       --------->ARR14(2) --------->LBD16              <---------At4g35610       <---------ARR14(2) --------->At4g35610          <----------DOF2             <---------ATERF1(1) --------->ANAC46          ------>ZmHOX2a(1)           <------NtERF2  <---------ATERF1(1)           --------->ZAT2       ---------->ID1             ------->GAMYB --------->At4g35610                <---------At4g35610     <---------ANAC58            --------->MYB46(3)--------->RAP2.3(1)             <---------ZAT2     <---------ANAC58          --------->MYB52(1)--------->DEAR3(1)                --------->At4g35610  <----------DOF2<---------At4g35610 --------->RAP2.6(2) <---------LBD16       ------>ZmHOX2a(2)    <   tcgtctttcgtcctttcgctgcaggcttcttctcaacggccgcatccgtcaccggcgcatccgcagcggtgtttccttcgatcgtagcagcgttctctat  2077600                                                                                                    <                                           <---------WOX13(1)                                      --                                         --------->ATHB12                                         <--                                ----------->GT1                                     <------ZmHOX2a(1)                               ------>ZmHOX2a(2)                                    =================                               ----------->GT1                                     <---------YAB1 <--                 <---------At4g35610    <---------YAB1----------->GT1           <---------YAB1   <---         --------->bZIP60(1)  <------ZmHOX2a(2)   ---------->DOF2             <---------ICU4     ----         <---------bZIP60(1) --------->ARR14(2) --------->ANAC58             --------->ICU4      *TSS      ----------->HVH21      <---------ARR14(2) --------->ANAC58             <---------YAB1     <---- ---------ALFIN1 --------->At4g35610    <---------AHL20(2)            ---------->DOF2<---------ARR14(2)   ttccacctctgacatcgtcttctgaacttaagatcggaaaatttgattgcaagaaagcgtaaatgtaatttcgaaagtgattatgaggattgtgaagagg  2077700                                                                  <------MYB83                                                                  ----------->GT1                                                                  <------MYB46(1)         --------->TOE1(2)                                        <---------MYB46(3)         --------->TOE2(2)                                      <---------WOX13(1)       --------->HSFC1(2)                                      <------------CBF       <---------HSFC1(2)                                     --------->ATHB12 ------------CBF                                   <---------ARR14(2)                             <-- ------->ATHB12                                    --------->ARR11(3)                     ------>ZmHOX2a(2) -------YAB1                                       --------->ARR14(2)                   --------->ARR14(2) ====HOX2a_HOX2a                                  <---------CCA1(2)                     <---------ARR14(2) ----ZmHOX2a(2)  --------->AHL20(2)       ------------>CBF   <---------YAB1          --------->ANAC46 ------ARR11(3)  <-----------TBP          <------NtERF2  <---------ANAC58           <---------LBD16 ----->ARR11(3)  <---------AHL20(2)     --------->ANAC46 <---------ANAC58------------>CBF<------ZmHOX2a(2) --ZmHOX2a(1)  <-----------TBP         --------->RAP2.6(3) <---------At4g35610    <---------REM1(2)   atcattggaaacgtccgatttatatagttagatgtgtattagacggcaattcatatctggcttctgattggttaaaacaatgactacgcggatcgctact  2077800                                                  ---------->DOF2                                            <------NtERF2                                          --------->ATERF1(2)                                          <---------DEAR3(1)                                          --------->ANAC46                                          <---------ATERF1(2)                                   <---------AHL20(2)                            <------ZmHOX2a(2)  <------NtERF2                     --------->ATHB12  --------->ETT(2)      <---------ZAT14     <---------TOE2(2)      ====================================HOX2a_HOX2a     <---------TOE1(2)   <---------MYB46(3)------>NtERF2  <---------ANAC46    <-----------RAV1(2) <---------TOE1(2)--------->RAP2.6(3)--------->ALFIN1 --------DOF2  --------->YAB1     --------->AHL20(2)     <------ZmHOX2a(1)          --------->MYB52(2)   cttttctcaggtttgaatattaatcgttggatcaaattttatcgacggcagagaaagaaggagtgtagatggtgggatgagtaagttagtggatgtggat  2077900                <-----------RAV1(1)       --------->WRKY38(1)                                    ----            --------->ICU4            --------->ATHB12                                        <------      <---------AtMYB61              <-------TEIL    ----------->GT1       <------------------------ANAC81    <----------DOF2     <----------DOF2   --------->WRKY12               <-------TEIL    <---------AtLEC2   tagatgctttggtcatatttgttgtgcttttagactcgattcatttgaccataactcgtgatatactcgatgaaattcgtttttgttttttgcattgtgt  2078000                                                                                 --------->CCA1(2)                                                                                --------->ARR11(3)                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                    <---------MYB52(1)   --------->GLK1(2)                                               <-------GAMYB<---------ARR11(3) <---------HSFB2a(1)                                         --------->CCA1(2)  --------->ARR14(2) --------->HSFB2a(1)                                        --------->ARR11(3)  <---------ARR14(2) ------->GT1    --------->MYB52(2)----------->GT1           <---------ARR11(3)--------->ANAC58 ---ANAC46     <-------TEIL     ----------->GT1           ----------->ARR10   --------->ANAC58   agaaaattctgtgagggttcgtttgattatctaaacgtgaaaaatggattattttgtaatgagatattcggttatgaagcaagatatgtcaaaactattg  2078100             <-----------GT1          <---------ZAT6      <---------ANAC58                                                                              -      <---------ANAC58                                             --------->YAB1                  --     <---------STY1(2)   <------MYB46(1)                           --------->TOE2(3)             ----     --------->STY1(2)   <------MYB83            <---------GLK1(2)----------->GT1                <---  <---------ANAC58 <---------AHL20(1)      ---------->DOF2        <---------YAB1        <---------ATHB12  <---------ANAC58 <---------ARR11(3)--------->YAB1       --------->YAB1     ------->TEIL        ----   tttttcttgctagtattacagtatatttggtttttcgaataatgctaaagagaatttcgatgaaaattatgttaatatgaaacttgactaatcaaggagt  2078200  Previous    Next  AGI:  At1g06760.1    Description:  histone H1, putative. Identical to Histone H1.1 [Arabidopsis Thaliana] (GB:P26568); similar to histone H1.2 [Arabidopsis thaliana] (TAIR:AT2G30620.1); similar to histone H1 subtype 5 [Pisum sativum] (GB:AAO74588.1); similar to histone H1 [Pisum sativum] (GB:CAG25587.1); similar to histone H1 [Pisum sativum] (GB:CAD65876.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H5; (InterPro:IPR005819) Range:  from: 2076503    to: 2077697    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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