Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->HSFB2a(2)                                                                                           >>>>>>>ZML2   ----------->GT1                 --------->YAB1                                 --------->AHL20(2) ---------->DOF2             ----------->GT1                                --------->YAB1 <---------HSFB2a(2) ----ZmHOX2a(1)            <-------GAMYB                                 <---------HSFB2a(2) ->CCA1(2)         --------->REM1(1)               --------->AtLEC2      --------->HSFB2a(2)   ggagaaagtaaatctattgctacaacttcagttgtaaatataacaaatatttcatgcagttttgaaatcaagtttctataacaaatatatgttctagact  2031900                                                                     <---------WOX13(1)                                                                   --------->ATHB12                                                                   -------->HAHB4                                                                   <--------ATHB1                                                                   <---------ICU4                                                                   --------->ATHB51                                                                  <---------ATHB51                         --------->ATHB12                         <---------AHL20(2)              --------->ATHB12                                    --------->AHL20(2)             <------ZmHOX2a(2)                                --------->AHL20(2)    <---------ANAC55(2)   <---------TOE2(3)     <---------AHL20(2)  --------->ICU4   <---------AHL20(2)   <-------TEIL<-----   <---------TOE1(3)    <---------YAB1  ----------->GT1     <----------DOF2       --------->CCA1(2)   aatttgaggtaatcgatcatttgatatttattgattcaaaatttgtaatttttgaaatttctctttaaataattggtttttgagatacataagaaaattc  2032000                                                         --------->AHL20(2)                                                --------->ANAC46                                          --------->ANAC58                                          --------->ANAC55(1)                      --------->ATHB12                                          --------->ANAC55(2)                    <---------ARR11(1)                                          --------->ANAC58                      <---------CCA1(2)          <---------ANAC58           <-------TEIL        <---------AHL20(2)   --------->YAB1          <---------ANAC58      <---------TOE2(3)--------->TOE2(3)          ------>MYB46(1)    ------    <-----------GT1            ---------->DOF2<---------CCA1(2)             ------>MYB83       ------ --TEIL<----------DOF2    --------->ICU4  <---------ANAC55(2)          <-----------GT1      ---------   atgttttgactttcttacccaagatgccatgtttaaagatgcacacgtatacctcatattaaaatgcaaattgtaacctatcgtatcatttgtataataa  2032100                                                                --------->MYB46(3)                                                               >>>>>>>>>>>>>>>>>LFY                                                              --------->ANAC58                                                              --------->ANAC58    <---------At4g35610                                       --------->ANAC46  <---------ANAC58                                          --------->TGA1a  <---------ANAC58                                          <---------TGA1a                     <---- --------->HSFC1(2)                                 <---------ARR11(3)               <----------DOF2 <---------HSFC1(2)                               --------->ANAC58                   <---------DAG2 --->YAB1                                         --------->ANAC58    <---------MYB52(1)     <------- ---->DOF2                               --------->YAB1 <-----------HVH21       <------ZmHOX2a(2) >YAB1<---------YAB1         <-----------GT1 <----------ID1 ====================================bZIP_DOF   agatgcttctgatttttgtttttcttcgtaataacttattgtataataagacaagaactgtcacgagccactgttattttcgatcaactttatattttat  2032200                                                                                                   <-                                                                                                   <-                                                                                              <------                                                                                              -------                                                                                    <------MYB83   <-                                                                                    <------MYB46(1)<-                                                                                   <---------MYB46(3)                                                                                   <------MYB46(1)---                                                                                   <------MYB83<-----                                                                                 <<<<<<<<<MYB98<-----                                                                                 <--------P   <------                                                                                <---------ANAC58  <--                                                                                <---------ANAC58  <--                                                                                <---------ANAC46  ---                                                                               <------MYB83 <--------                       --------->PCF2                                          <---------MYB46(3)<---                     <------MYB83                                              <---------DEAR3(2)----                     <------MYB46(1)                                           <------MYB46(1)<------                    <---------MYB46(3)                                        --------->MYB55(2)<----                   <---------MYB52(1)                                     <---------AtMYB61--------->ALFIN1           --------->STY1(2)                                          <----------DOF2      <---------           --------->ZAT2                                             <---------DAG2<---------ANAC46<        <---------ANAC58                                       --------->TOE2(3)<-------GAMYB <------        <---------ANAC58<-----------------AGL1   ----------->GT1   <-----------GT1 --------->MYB59--- -----YAB1 <---------ZAT2               --------->ANAC58      <---------ICU4  <---------MYB46(3)<---- --AHL20(2)<---------STY1(2)            --------->ANAC58     --------->ICU4  <---------ANAC46 <------   caatggttttgctagctagcagttggtcccatcttggaacacaagaaaaacgagtaatatgtcaacattatactttttggtgggttgggtaatgtgtcgg  2032300    <----------DOF2   <---------ANAC58   <---------ANAC58 --------ANAC58 -----MYB83 ---DREB2C(2) -->ETT(1) -----MYB46(1) --------ANAC58 ------>MYB111(1) ----MYB46(3) ----DEAR3(2) ---At1g77200 -------MYB46(3) -------DEAR3(1) ------>MYB55(2) ---HVH21 ------MYB55(1) ----->ALFIN1 ---DEAR3(1) -----MYB52(1)               <---------WOX13(1) --RAV1(1)        >>>>>>>>>ARR1 ---------PCF2    <------------CBF                                                            <------ ---DEAR4(1)      >>>>>>>>>ARR2                                                     =================HOX2a_HOX2a ------>MYB111(2)--------->ATHB12                                      --------->ANAC58       <------ ---GAMYB<---------MYB52(1) <------------CBF          --------->AtMYB61--------->ANAC58       ------>ZmHOX2a(2) ---ANAC46      <---------YAB1       *TSS  <---------SPL7           --------->ZAT18 ------>ZmHOX2a(1)   tgggtgctttcgttatatatgattgtatcagattgctctatctgtcttacgagagaccaaaacgatggagagcacgaagattgctccttcattcgatcgt  2032400                                                  --------->WRKY45         ---------->DOF2                          --------->WRKY12         --------->ANAC58     --------->At4g35610                          --------->WRKY38(1)      --------->ANAC46     <---------At4g35610                   <------ZmHOX2a(1)               --------->ANAC58   <---------ZAT18                     ---------->DOF2              --------->HSFB2a(1) ---ANAC58                           ----------->HVH21     <---------GLK1(2)                 <------- ---ANAC58    <----------DOF2      <---------ANAC46    <---------LBD16    <---------LBD16    --------   gccagtgagcttaaagctttcgatgagacgaagactggtgtgaaaggactcgttgactctggaatctcaaagattccacgcattttccatcactcatctg  2032500                                                                  <---------LBD16                                                                  <---------HSFB2a(2)                                                                 ============================HOX2a_HOX2a                                                                 ==============HOX2a_HOX2a                                                                 ------>ZmHOX2a(2)                                                            =================================HOX2a_HOX2a                                                            ===================HOX2a_HOX2a                                                            <------ZmHOX2a(2)                                                          ------->GAMYB                 --------->ANAC58                                                         --------->MYB46(3)         --------->LBD16                                      --------->REM1(1)  <---------MYB52(2)        <---------HSFB2a(2)                           --------->TOE2(1)           --------->MYB52(1)          --------->HSFB2a(2)           --------->TOE2(3)  --------->ARR14(2)   <------ZmHOX2a(2)    <------ZmHOX2a(1)           --------->TOE1(3)----------->HVH21      ============================HOX2a_HOX2a    ------- --At4g35610               --------->TOE1(1)      --------->ARR14(2)   ----------->HVH21--------->ANAC58 ->At4g35610  ---------->DOF2 <---------ARR14(2)  <---------ARR14(2)   <---------SPL7 <------ZmHOX2a(1)   tcgaactagcaaaccctaaaccacttccctcggacctgctacatctcaagacgatcccaacgatcgatctcggaggacgggacttccaggacgcgattaa  2032600                                           <---------ANAC58                                           <---------ANAC58                                      <---------O2                                      --------->O2                                      <---------TGA1a                                      --------->TGA1a                               <---------At4g35610                               --------->At4g35610                               <---------ZAT2      --------->ANAC58         --------->ZAT2--------->GLK1(1)      --------->ANAC58 <---------TOE2(3)--------->ALFIN1       --------->MYB46(3)  --------->ANAC58    ---------->DOF2 =================================MYC_MYB  --------->ANAC58    ==========================bZIP_DOF       <---------ATHB12                  ==== --->DOF2        ----------->GT1  ------>NtERF2               -------->P                         ----   gcacaagaacgcgattgaagggattaaagaagcagctgccaagtggggtttcttccaagtgatcaaccatggagtttcgctcgagcttcttgagaagatg  2032700                                              <---------ARR11(3)                                            ----------->ARR10                                   <---------TGA1a                            =================MYC_MYB               --------->At4g35610                            ------->GAMYB<------ZmHOX2a(1)         <---------At4g35610                           --------->MYB46(3) --------->ARR11(3)--------->RAP2.6(3)                  --------->YAB1------>ZmHOX2a(1)             <---------ARR14(2)               ==============================bZIP_DOF     ------>NtERF2                  <---------AHL20(2)         <---------ANAC58 ===================MYC_MYB      --------->LBD16              --------->ANAC55(2)         <---------ANAC58 -------->P --------->ALFIN1    --------->RAP2.6(2)         <---------AHL20(2) ============================================bZIP_DOF  --------->At4g35610     <<<<<<<<<GATA-1 ------>DOF2   <----------DOF2----------->RAV1(2)      <---------At4g35610    <-----------GT1      --   aaagatggagttcgtgactttcatgagcaacctcctgaagtgaggaaagatttgtacagccgcgatttcggcagaaagtttatctatttaagtaatttcg  2032800  Previous    Next  AGI:  At1g06640.1    Description:  2-oxoglutarate-dependent dioxygenase, putative. Identical to 1-aminocyclopropane-1-carboxylate oxidase homolog 2 [Arabidopsis Thaliana] (GB:Q9C5K7;GB:Q9SHK4); similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT1G06650.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN66433.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 2032337    to: 2034017    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version