Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                                -----                                                                                                -----                                           --------->ARR14(2)                                   <----                                          <------ZmHOX2a(1)                                     <----     <---------GLK1(2)          --------->CCA1(2) --------->At4g35610           --------->TOE1(3) ---------->DOF2           <---------YAB1--------->ANAC58      --------->ARR11(3)               <---- ---------ATHB12     <---------ANAC46    --------->ANAC58--------->YAB1         --------->TOE2(3) -------->ICU4      <---------LBD16    <-----------RAV1(2) ---------->DOF2 --------->AHL20(2)   -----   caataaagaaactcgatacaacttcgggtatgagagacgggccaggaaactcagaagaatcaaaagacattgctgaattaaacctcaaaaaactacaaga  2024300                                                                              ------->GAMYB                                                                             --------->ANAC58                                                                     <----------CDC5        <---------HSFB2a(2)                                         <---------At4g35610 -----ARR14(3)                                                      --------->At4g35610 ---->AHL20(1)                                                  --------->ALFIN1 ---->ARR11(3)                                                 <-------GAMYB --------->ANAC58 ---->ARR14(3)                                                <---------MYB46(3) -----ARR14(2)                --------->TOE2(3)              <---------DEAR3(1)             --------- -----AHL20(1)                --------->TOE1(3)              <---------RAP2.6(2)           ---------- -----ARR11(3)        ----------->GT1                      ------------>AtMYB77      ---------->DOF2 ---->ARR14(2)--------->GLK1(1)                          <------NtERF2     --------->MYB52(1)   tattgcaattcgagagaaatcgaagagtgaaaccttagtaagagagagcaagtagaggccgaggcggttgtgctgagcaacggaagagaaaggaaaagga  2024400                                =========================HOX2a_HOX2a                                <------ZmHOX2a(1)                        <---------ARR14(2)            <---------ANAC58                        --------->ARR11(3)            <---------ANAC46                        --------->ARR14(2)            <---------ANAC58                        <---------ARR11(3)        ------>ZmHOX2a(2)             <---------MYB46(3)                      <---------ARR14(2)         <------ZmHOX2a(2)          ------->PIF5                      ----------->ARR10         --------->ARR14(2)          --------->MYB46(3)                      --------->ARR14(2)        <---------ARR14(2)          --------->DEAR3(1)                   <---------ANAC58             --------->AGP1              <-------PIF5                   <---------ANAC46             <---------ARR11(3)         --------->At4g35610                   ----------->GT1              --------->ARR14(3)         --------->DEAR3(2)                   <---------ANAC58             <---------ARR14(3)        --------->MYB52(1)    -----                <------ZmHOX2a(1)              <---------GLK1(1)        <---------ABI4(2)      ------    <---------At4g35610<---------GLK1(1)       --------->GLK1(1)       --------->ANAC58      <-------    --------->At4g35610--------->GLK1(1)      ----------->ARR10        --------->ANAC58 <---------MYB52(1)    ----------->RAV1(2)<---------CCA1(2) --------->MYB52(1)    <---------At5g28300<---------MYB52(1) >DAG2   --------->At4g35610    ========================HOX2a_HOX2a  ---------->DOF2   --------->TOE2(3) >DOF2   <---------At4g35610 <-----------RAV1(2)--------->ARR11(3)--------->LBD16<---------RAP2.6(3)<   agagacatctgagcggaaggagcgtatatctgcaggagaatgcaaacggagatcttgtgtggagttaccgcaaaagcaccggccgttctcgttaatccgg  2024500                                                                                                  <-- <---------ARR14(2)                                                                       ------>NtERF2 <---------ARR11(1)                                                                       --------->LBD16 --------->ARR14(2)                                                                      <---------ANAC46 --------->ARR11(3)                                                                     <---------LBD16 <---------ARR11(3)                                                     <-----------RAV1(1)---------- ->NtERF2                                                            --------->ANAC58  <---------ZAT2 --->LBD16                                                           --------->ANAC58  --------->ZAT2 --LBD16<-----------RAV1(1)             --------->ARR14(2)           --------->ANAC46  ------>NtERF2 ---------CCA1(2)                 <----------DOF2         <----------DOF2<-------GAMYB----------->HVH21   ccatatctctctgtcgctaaaacactcactctctcactttgggattcacactgtctctcactttgggactcacgctgttgctcaatccctgccgggttat  2024600                 <------NtERF2                --------->LBD16                                                <---------ZAT18              <---------LBD16                                                  <---------ZAT14             --------->ZAT2                                                    --------->ZAT18             <---------ZAT2                                             ---------->DOF2            --------->DEAR3(1)                                       --------->LBD16          --------->At4g35610                                       <---------LBD16     ------>NtERF2                       <---------AHL20(2)        <---------LBD16    ----------->HVH21        --------->TOE2(3)                    <---------At5g28300    --------->DEAR3(1)   --------->ZAT18<---------AHL20(2)     <-----------HVH21   <----------DOF2 ---------GT1--------->At4g35610    <------ZmHOX2a(1)        *TSS<---------WRKY38(1)              --- ->GT1    --------->ZAT2 <---------ZAT18--------->AHL20(2)---------->DOF2--------->DAG2 ---------->DOF2   tttcccccgacgagcagccgggattagggcaccttagaggaattaatttgaaattttgactaaagagtcaccgggaaagtgagcactttgaaaagagaaa  2024700                                             <------NtERF2                                             --------->ATERF1(1)                                             <---------MYB52(1)                                            <-----------HVH21                                            ------>NtERF2                                            <---------SPL7                                           --------->RAP2.3(3)                                           --------->ATERF1(2)                                           <---------ATERF1(2)                                           --------->DEAR3(1)                                          --------->RAP2.3(1)                                          --------->ERF1                                        --------->DEAR3(1)                                       -------->ZAP1                                       --------->MYB46(3)                                       --------->DEAR3(2)                                     <---------WRKY18(1)                                    ----------->HVH21                                  <-------GAMYB                                  --------->At4g35610                                  <---------At4g35610                                 <---------MYB46(3)                                 --------->MYB52(2)                                 --------->MYB55(2)                                 --------->MYB46(2)                                 --------->MYB111(2)                  <---------MYB52(1)--------->WRKY38(1)                 <---------MYB52(1) --------->WRKY12        --------->AHL20(2)      <--------P--------->RRTF1(1) ----------->GT1----------->GT1 <---------MYB55(1)      --------->TOE2(3)         --------->ANAC58 ------->DOF2--------->MYB52(1)<---------MYB52(1)       --------->TOE1(3)         --------->ANAC58<--   caaaggaaaaataaaaaccggttatttcaggccggtagttgaccgccgtcgggttaagccttaagagtatataacccagaggccaaggcccaaagttttc  2024800                                                                   <---------ICU4                                                                  --------->ICU4                    <                                              ---------->DOF2     <---------ATHB12                <--          <---------TOE2(3)          ----------->GT1       --------->AHL20(2)                     <--     <----------DOF2                --------->DAG2  ----------->GT1--------->YAB1           <--------  <-----------GT1     <---------ANAC46       --------->AHL20(2) --------->YAB1              --------- --------DOF2  --------->ATHB12   ---------->DOF2   --------->At4g35610                 <----------DOF2   cttttaacttttaagtttgatttgatgtgtaaggcccaaaggtgaaataaaagaagctaaataaactaataatcaaacgaataaaacttcctttttaatt  2024900                                                                                      <-----------GT1                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                    <----------TaMYB80                                                                                   --------->ARR14(2) ---------MYB52(1)                                                              <---------ANAC46 -------ANAC58                                 ------->GAMYB               --------->DAG2 -------ANAC58              <---------AHL20(2)--------->ANAC58            ---------->DOF2    -------- -AHL20(2)               --------->TOE2(3)    --------->ANAC58 ---------->DOF2 <-------TEIL  <------- >AHL20(2)    ----------->RAV1(1)<-----------GT1     <-----------GT1   --------->AHL20(2)  <---------   tcgtttttttttggggcaacaaaactttcttaaatttacaaaactacaacggaatttacaaattacaaagacattaaaaagttcgtatatactcttttat  2025000                                                                               <---------TOE2(3)                                                                     <---------YAB1                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                  <---------AHL20(2)                                                               <---------AHL20(2)                                          <----------DOF2      --------->AHL20(2)                                       <-----------GT1        --------->AHL20(2)                                      <-----------GT1         --------->AHL20(1)       <------------- ->AHL20(2)                <---------GLK1(2)                  <---------AHL20(1)       -------------- --AHL20(2) <---------ARR11(3)       <---------AHL20(2)--------->GLK1(1)     ---------->DOF2     <--- -DOF2     --------->RVE1(1)--------->GLK1(2)   <---------YAB1<---------AHL20(2) <------ZmHOX2a(1)   tagtttcgactaaatatcgtattagaacagaatctatattttatctttttatcagagatttcaatttatttatttttgacaaaggattacctcatgtagt  2025100                                                                                        <---------YAB1                                                                                     <---------AHL20(2)                                                                                  --------->AHL20(1)                             <---------ANAC46                                    --------->AHL20(2)                          ----------->HVH21                                      --------->YAB1                          ----------->TGA1           ------>NtERF2     <---------ARR14(2) --AGL15             --------->YAB1                 --------->ANAC46   --------->ARR14(2)<-----------RAV1(1) ->AGL15            <---------YAB1     <---------HSFB2a(2)       <---------ARR14(2)  <---------YAB1 ------MYB46(3)   --------->YAB1       --------->HSFB2a(2)       --------->ARR14(2) <---------AHL20(1)   tgttgccaacttgccattaaccatgatagtgacgcaggcttccaaaacatttcgacgcgagagccactatccgaatacttgaataatattattgttgcga  2025200  Previous    Next  AGI:  At1g06590.1    Description:  binding. similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99493.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO69986.1); similar to hypothetical protein OsI_037933 [Oryza sativa (indica cultivar-group)] (GB:EAY83974.1); contains domain PTHR12830:SF5 (PTHR12830:SF5); contains domain PTHR12830 (PTHR12830) Range:  from: 2016307    to: 2024661    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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