Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->WOX13(1)       <---------ANAC55(2)      <-------TEIL     --------->CCA1(2)                                                                         <-----    <---------ARR14(2)                                                            <------MYB83 ------    --------->ARR14(2)                   --------->GLK1(2)                        <------MYB46(1) -------TEIL                             <---------ARR14(2)                       ----------->GT1 -------GLK1(2)                          --------->ARR14(2)   ------->GAMYB    <------ZmHOX2a(1) -------ARR14(2)             --------->YAB1        <---------ARR11(3)      ---------->DOF2     ------ ------>ARR14(2) --------->MYB46(3)     <---------ARR14(1)--------->MYB46(3)--------->DAG2  <--------   gattcagatacataaatcaaacaccatgaattcataaacagcgaatccaacaagaactcaacaacgaaatcgagccaaaaaggatggttttttaaaacct  1952400       <---------GLK1(2)                                 ----------->HVH21       --------->ARR11(3)                         --------->ANAC58                   --------->GLK1(2)       <---------ARR11(3)                         --------->ANAC58                   --------->ARR14(2)       <---------ARR14(2)                         --------->ANAC55(1)                <---------ARR14(2)      <------ZmHOX2a(1)             --------->ANAC58   --------->At4g35610           <-----------ARR10    <---------TOE2(3)               --------->ANAC58   <---------At4g35610          <---------CCA1(2)  ------>ZmHOX2a(1)        <------ZmHOX2a(1)   --------->ARR14(2)             --------->ARR14(2) ----DAG2              --------->At4g35610     <---------ARR14(2)             <---------ARR14(2) --->TOE1(3)     --------->DAG2    --------->DAG2 --------->ANAC55(2)    --------->At4g35610 --->TOE2(3)    ---------->DOF2   ---------->DOF2 <---------ANAC55(2)   ----------->RAV1(1)    ------ ---GT1--------->ARR14(2) ----------->GT1     <------ZmHOX2a(1)     <---------WRKY18(1)      <-------   tatcctaaggattttcaataaagtaagcaggaaaaaaaaagcaagagaggaaacgtaatctgacctctcttgaccagcagtatcccaaatctgagctttg  1952500                                                                                                    <                                                                                                   --                                   --------->ANAC58                                               <--                                   --------->ANAC58       --------->ARR14(2)                      ---                                <---------ZAT18           <---------ARR14(2)                      <--  <----------DOF2        <---------AtMYB61<XXXXXXXXXXXXXXXXXXXXMIR776                           ----- ----->HVH21   <---------ZAT14  --------->ZAT18   <---------ZAT18                             <------ ---DOF2      <----------DOF2 <-----------------------TaNAC69(2)                     ------->TEIL ---   acgactttgccttcgactttagtggttttggtagcgaactcaacaccaatagtagacttggattcgagattgaactcgttcttggtgaaccgagagagca  1952600          <---------ATERF1(1)          <---------RAP2.6(3)          ------>NtERF2         <---------ETT(1)         <---------ATERF1(2)                                                        <---------At4g35610         --------->At1g77200                                                        --------->At4g35610         --------->ANAC46                                                       <-----------HVH21 -------TEIL                                                                  --------->MYB46(3) ------->ARR14(1)       --------->DEAR3(1)                                   ------>MYB46(1) -------ARR14(2)       <------NtERF2                                         ------>MYB83 ------>ARR14(2)     <---------DEAR3(1)                                     --------->ANAC58 -------GLK1(2)      --------->DEAR3(1)                       <---------At4g35610 <-----------RAV1(2) ------>ARR10------>NtERF2 <------ZmHOX2a(2)       --------->YAB1           --------->ANAC46 ---At4g35610----------->RAV1(1)                  --------------->AtSPL3    --------->ANAC58 ------>ARR11(1)  <---------GLK1(2)               --------------->AtSPL8  --------->MYB46(3) <------ZmHOX2a(2)   gattcgatttgccgacaccagagtcgccgatcaacacgagcttgaagaggtaatcgtactcttcatcggctctgtaaccagccatcagatgagagatcga  1952700                                                                         <---------At4g35610                                                                   --------->ATHB12                                                                   <--------ATHB1                                                                  <---------YAB1                                      <---------At4g35610         <---------ATHB12                                <---------ANAC58                 <---------TOE2(3)                                <---------ANAC46               --------->AHL20(2)                                <---------ANAC58               <---------AHL20(2)     ---------->DOF2                           --------->ALFIN1             <---------ICU4   --------->At4g35610     <---                           <-----------RAV1(1)       --------->YAB1-------->HAHB4   <---------YAB1                       <---------At5g28300          <---------YAB1--------->ICU4    *TSS         ----                      <-----------GT1 --------->At4g35610  --------->AHL20(2) ----------->TGA1<------                    <----------DOF2<---------At4g35610 --------->ICU4  <-----------RAV1(2) <---------   attttgggattagggaattgggttttactgtgttgcttgctgctgtattatttgatgataatgaattaatgattcagatgatgacgatgaaagcttttgt  1952800   <------MYB83   <------MYB46(1)                                                                           ========  <---------DEAR3(1)      <<<<<<<<<TBF1                                          <----------DOF2 <--------P           <-----------GT1                   --------->AHL20(2)     <---------At4g35610 ------ANAC46        <------------------------ANAC81 ----------->GT1           --------->At4g35610 ----->ETT(1)     <----------DOF2                   ----------->GT1            --------->LBD16      < -----RAV1(1)     <---------DAG2                   --------->DAG2       <---------YAB1       -------- -DOF2       <-----------GT1   <----------DOF2    ---------->DOF2  ---------->DOF2    <---------AHL20(2)   cgggttggctctaaatcacccttttttcttcttctttttgtttttgaacagaaaaagtttaaatttttaaaaagatgattccgcttaattagttgcacat  1952900                --------->ARR11(3)                <---------ARR11(3)             --------------->AGL15     <---------ARR14(2)     <---------ARR11(3)                                  --------->TOE2(3)     <-----------ARR10                            --------->ICU4     --------->ARR11(3)                           <---------YAB1     --------->ARR14(2)                         <--------HAHB4    <---------GLK1(1)                           <---------ICU4                      <-----------GT1    --------->GLK1(1)                           --------->YAB1                    --------->AHL20(2)  <------ZmHOX2a(1)                            --------->ICU4                 <---------YAB1        < ============================MADS_MADS         <---------YAB1               <-----------GT1    ------ ---------TOE2(3)                       ----------->RAV1(1)                 --------->YAB1    <------ ------->AGL15 <---------CCA1(2)     --------->YAB1    <-----------GT1  <---------YAB1       <-------   tttaggaaatcttctccatatattgttaacaacttccactcacaacataatcatttttaacttaatacagttttctaattacaatttaacaagattaaca  1953000                <---------DAG2              ------>MYB83      <---------ARR14(2)      --------->ZAT14                               <---------AHL20(2)      <---------ZAT14                       <---------ARR11(3)      --------->ARR14(2)   <---------AHL20(2)       <-----------GT1 -----------GT1 <----------DOF2             --------->ARR14(2)                            <---------At4g35610 --->ZAT6     ------>MYB46(1)               <---------ARR14(2)                           ------->TEIL ---TOE2(3) <---------MYB111(1)             --------->ARR11(3)                       ------->TEIL ----GT1    <---------MYB111(2)      <------ZmHOX2a(1) <----------DOF2            <---------ATHB12   ataaacagtatacacctacttttctaaaatttatcttcaggatgaagatactatttactttcattttcttaagtttgggtttcaatgaatgtagctacta  1953100                                     <---------CCA1(1)            ----------->RAV1(2)      <---------RVE1(1)                     <---------YAB1           -------->P               <---------ARR11(3)                     <---------AHL20(2)       --------->ANAC58    <---------AHL20(2)                          <----------DOF2             --       --------->ANAC58    --------->AHL20(2)                          <---------DAG2  <---------AHL20(2)    --------->STY1(2)     --------->AHL20(2)  --------->ICU4        <-----------GT1    --------->AHL20(2) ------>ZmHOX2a(1) ----------->GT1  --------->ARR11(3)      --------->ARR11(3)        <---------YAB1   ctccttagctagcaacctggagagtttataaaattagagatatttgtattgatttttaaaaatatcaagtttacttttttattagattataaatttttga  1953200                                                                            <---------ANAC58                                                 <-----------RAV1(1)        <---------ANAC46                               --------->ANAC55(2)                          <---------ANAC55(2)                            <-------TEIL   <---------YAB1              <---------ZAT6              --  <---------ANAC55(2)      <-----------HVH21    <---------TOE2(3)    --------->YAB1     <-------TEIL  --------->ANAC55(2) <-----------GT1  <---------DAG2    <---------ALFIN1   <---------ANAC58--------- ------->ICU4 <---------GLK1(2)--------->ANAC46--------->YAB1    --------->MYB46(3)----------->RAV1(1)   aattatgtattactcagaaactttctacggttcacataacaccttactataatgttgctccatccgaacaatcgtgttacttatgcaacatacacaaaga  1953300  Previous    Next  AGI:  At1g06400.1    Description:  ARA2 (Arabidopsis Rab GTPase homolog A1a); GTP binding. Identical to Ras-related protein ARA-2 (ARA-2) [Arabidopsis Thaliana] (GB:P28185); similar to AtRABA1c (Arabidopsis Rab GTPase homolog A1c), GTP binding [Arabidopsis thaliana] (TAIR:AT5G45750.1); similar to Ras-related protein Rab11D (GB:Q40194); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 1950843    to: 1952784    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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