Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ANAC58                                 <---------ANAC58                         <---------ALFIN1                         --------->ANAC46                                        <-----------GT1                  <---------ANAC58                                              <-----------GT1   <---------YAB1 <---------ANAC58                                         <---------AHL20(2)       - -----GLK1(2)   <-----------GT1  <---------ANAC46   <---------ANAC46 <-----------TGA1 <----------DOF2   gtcttatttttgtatagtttacgttccccactactgcttgttaatcttacattttcgtaaactagtctcatcgtcattttttttagccctttgcaactta  1946400                                        <--------P                                       <-------GAMYB                                      <------MYB46(1)                                      <------MYB83                                             <-----               ------->TEIL       <---------MYB46(3)              <---------MYB52(1)          -------            <---------YAB1        <-----------RAV1(1)             --------->DOF5.7(2)     <---------ALFIN1          <---------AtLEC2     <----------DOF2       ---------->DOF2<---------DOF5.7(2) ----------->RAV1(1)      <----------DOF2       --------->ICU4   <---------ZAT14     --------->TOE1(3)      =============    <---------YAB1      --------->At5g28300 <---------ZAT6       --------->TOE2(3)   --------->ANAC58 <---------AHL20(2)   --------->ZAT6  --------->MYB55(2)  --------->GLK1(2)          --------->ANAC58 -------->AHL20(2)  --------->MYB52(1)<---------MYB46(3) <---------GLK1(2)        ---------->DOF2   aattttatctttgtatgaatgctaactgtaattcttttgttggttagtgtaatgaaaaagaatctatcgttaactattgtcttacaaaggcaacacttca  1946500                                          <---------------AGL15                                          --------------->AGL15                                         <-----------------AGL2                                         ----------------->AGL2                                         ----------------->AG                                         <-----------------AGL3                                         <-----------------AG                                         >>>>>>>>>RAP2.2                                <---------YAB1                                         ============================================================                                       <---------ARR11(3)                             --------->YAB1                                 --------->TOE2(3)                                    --------->ATHB51     <----------ID1              --------->TOE1(3)                                    <---------ICU4 ---------->DOF2               <---------TOE1(3)                                      <--------HAHB4 ------RAV1(2)        <----------DOF2  --------->ARR11(3)  <---------WOX13(1)        <---------YAB1 -->ZAT14---------->DOF2  <---------TOE2(3)              --------->ATHB12            --------->ICU4 ======RAV    ---------->DOF2  <---------TOE2(3)        <---------YAB1   --------->ATHB12   ggctaaagggacaaagaaaagtctctttaagttaagcttaatatctaaattgggaaatatgattggagtattcattcatttgataccattattattcagt  1946600                                                      <---------TOE1(3)                                                      <---------TOE2(3)                                             <---------AHL20(2)                                 -----                                             --------->AHL20(2)                                ------                                           --------->TOE2(3)                                ---------                                          <--------HAHB4                                 --------->WOX13(1)                     <---------------AGL15--------->YAB1                           <----------DOF2      <---------AHL20(2)                 <---------YAB1               <---------GLK1(2)------------>CBF     --------->AHL20(2)                  --------->ICU4 <------ZmHOX2a(1)  <-----------GT1  --------- ====================================MADS_MADS<---------AHL20(2)   --------->YAB1  <---------DAG2   tagaatatttaatggagttctaactcaacttagtaatttagttatcattaaatgctaaggaagtgtttatcagaatttttcagtgctttatcaattaaaa  1946700                                                      <------------CBF                                                   ------>ZmHOX2a(1)                                               <---------PCF2                                               <---------ARR14(2)                                               --------->TCP15(1)                                               --------->ARR14(2)                                             <---------MYB46(3)                                            --------->ALFIN1         <------------CBF                   <---------MYB52(1)                                   <---        --------->ATHB12                   <---------LBD16                                      ----- ---->DAG2        <---------MYB52(1)      <---------ANAC58                             *TSS    ------ ---->DOF2       <-------GAMYB            <---------ANAC58                             ---------->DOF2 >YAB1 <---------YAB1      --------->ANAC46--------->LBD16                          --------->ANAC58 >AHL20(2)      ----------->GT1           <---------ANAC46      <-----------GT1     --------->ANAC58-   agtagttttctcattggaccgttacattcacgcgctctagtcttccgtgggtcctccattgtctttgaaccatttctgaaatttagaagcaaagagagag  1946800                                                              <---------ICU4                        -                       <---------ANAC46                ------->MYC2            ---------->CDC5     <-          --------->ZAT14                              <-------MYC2           <------NtERF2        --         <----------DOF2  <---------MYB46(3)           <-------MYC3         --------->ATERF1(1)    -- ---ZmHOX2a(1)       --------->ZAT14             --------->DAG2            ------>NtERF2          <-- ------>GT1          <---------ZAT14      ----------->GT1    <------NtERF2<---------PCF5          --- ----->GT1<---------ZAT14 --------->MYB55(2)    ---------->DOF2     --------->ATHB12              --- -------->ICU4 <---------ICU4         ---------->DOF2  ------->MYC3<---------YAB1                <---   gaaaaattagactttactcattgttcagtggttgagagagaaaagagtaaaaaagcacatggcctcattaccattggggcctcagcctcatgctcttgct  1946900                      <------NtERF2                    ----------->HVH21        <---------At4g35610        --------->At4g35610     <---------At4g35610  <----------DOF2  --------->At4g35610------>NtERF2  ------>NtERF2     --------->DEAR3(1)  <---------At4g35610<---------ATERF1(1) <---------DEAR3(1)--------->ATERF1(1) --------->DEAR3(1)--------->RAP2.3(1) --------->RAP2.3(2)<---------DEAR3(1)   ------>ZmHOX2a(1)                                          < -------->RAP2.3(1)<------NtERF2       <-----------------AGL1                                       < --------ATERF1(1)<---------ATERF1(1)<---------RAP2.6(3)   ----------->GT1              <---------ANAC46 ---->NtERF2      ------>NtERF2      --------->ORA47(1)   <---------TOE1(3)             <---------ANAC58 ------->LBD16    <---------RAP2.3(1)------>NtERF2        <---------TOE2(3)             <---------ANAC58 -------ALFIN1   <---------DEAR3(1)  <---------SPL7  <---------YAB1            <----------DOF2     <- ------>ANAC46----------->HVH21  --------->ANAC58<---------ARR14(2)        <---------CCA1(2)    <---- ------>DEAR3(1)--------->RAP2.6(3) --------->DEAR3(1)    --------->DAG2 --------->ANAC46     <------ ------LBD16  --------->ANAC46   --------->ANAC58<---------GLK1(2)<-----------GT1     <---------ANAC46   ccgccgctgcagcttcacgacggcgacgctttgaaacgccgtcctgaattggattctgataaggtttatttctccccgtctctttgttttgtgtgttact  1947000                                                        --------->AGP1                                                        <-----------ARR10                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                     >>>>>>>ZML2                                                     --------->HSFC1(1)                                                     --------->HSFB2a(2)                                                     <---------HSFB2a(2)                                              <------NtERF2                                             <---------MYB46(3)                                            <---------RAP2.6(2)                                          <------MYB83  <---------AGP1                                          <------MYB46(1)==========================HOX2a_HOX2a                                          <---------ANAC58                                          <---------ANAC58                                         <---------AtMYB61=========================HOX2a_HOX2a                                         --------->MYB111(1)                                         --------->MYB52(2)             ----------->GT1             <---------MYB46(3)        <------ZmHOX2a(2)             <------MYB46(1)             --------->MYB46(2)        ================HOX2a_HOX2a            --------->MYB59              --------->MYB111(2)      --------->ARR14(2) ---------DOF5.7(2)    <---------ZAT14   --------->MYB55(2)       <---------ARR14(2) ---------At5g28300    <---------ZAT18  <---------MYB55(1)------>ZmHOX2a(2)    <----------DOF2 ----------GT1         --------->ZAT14 <---------MYB52(1)<------ZmHOX2a(2)   <---------TOE1(2) -----ZAT6  --------->MYB46(2)      <---------TOE2(3)<---------HSFC1(1)     ------>ZmHOX2a(1) ---At5g28300<------MYB83        --------->ICU4 <---------MYB46(3)--------->AGP1   <----------DOF2   gttaccgtctgtgtttggtaaacagtgcatttgaaattatcgtttggtggctgttctagatctactccgatctagctcctactttctttgttctatgtct  1947100                                                                     --------->LBD16                                                                   <---------LBD16                                                              --------->ZAT2                                                              --------->At4g35610               -----                                                              <---------At4g35610               -----                                                          ------>ZmHOX2a(2)                     <----                                                         --------->At4g35610                    <----                                                         <---------At4g35610                  ------>NtERF2                             <----------DOF2   <---------ANAC46   --------->MYB52(1)         --------                           <---------ZAT18     <---------ANAC58 ----------->HVH21            -------- <---------ZAT14        <---------ANAC58       <---------ANAC58 --------->ZAT18        <----------DOF2 --------->ZAT14        <---------ANAC58  --------->MYB52(2)  <---------ZAT2           ============== <---------ZAT18   <---------GLK1(2)  <---------MYB46(3)<---------AGP1             ---------->ID1   tagttcagtcgaatcgatctatattctcgtgctcttgtgtttgttcgtcgcttgtattgatctgagctcaccggagagtttttttgtttctttctccgac  1947200      <---------YAB1 <---------ANAC58 <---------ANAC46 <---------ANAC58 ---->O2 ---->TGA1a -----O2                  <-----------GT1 -----TGA1a            <---------ICU4                                      <---------ZAT2 --->HVH21            --------->ICU4              --------->STY1(2)        --------->ZAT2          -- ->DEAR3(1) <------ZmHOX2a(1)                     <---------STY1(2)        <---------At4g35610   <--- =====bZIP_DOF   ----------->GT1         <---------AtLEC2  <---------YAB1 --------->ANAC46      -----   gaggcgttttgataggagactgtgatttttacttcatttgtatgcatgcagtagctagattactcttggtatctcccagctactacttcaaccttctcta  1947300  Previous    Next  AGI:  At1g06390.1    Description:  GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); kinase. Identical to Shaggy-related protein kinase iota (ASK9) [Arabidopsis Thaliana] (GB:Q39012); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G14640.1); similar to shaggy-related protein kinase delta / ASK-delta / ASK-dzeta (ASK4) [Arabidopsis thaliana] (TAIR:AT2G30980.1); similar to BIN2 (BRASSINOSTEROID-INSENSITIVE 2), kinase [Arabidopsis thaliana] (TAIR:AT4G18710.1); similar to hypothetical protein OsI_000803 [Oryza sativa (indica cultivar-group)] (GB:EAY72956.1); similar to unknown [Populus trichocarpa] (GB:ABK95578.1); similar to BIN2-like protein [Brassica napus] ( Range:  from: 1946787    to: 1950754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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