Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ARR11(3)                     <---------AHL20(2)                     <---------AHL20(1)                     --------->AHL20(1)                                                     ---------                --------->AHL20(2)                                                   --------->TOE2(3)     <------ZmHOX2a(2)           --------->YAB1                                    --------->ICU4 ------->MYB52(1) --------->AHL20(2)           --------->MYB52(1)--------->ANAC55(2) --------->YAB1 - >MYB46(3) --------->LBD16      <---------ATHB12    <------ZmHOX2a(1)           <---------YAB1    <--   ccaacggatcaccctgaaaataatatatcgtctaatcatactctaaaacgaacaggaattgacatatatgtaatacatagttatcaatattaatcggtat  1940100                                         --------->ANAC46                                         --------->ANAC58                                         --------->ANAC58                                   --------->GLK1(1)                                  --------->ARR14(2)               <-----------HVH21                                  --------->ARR11(3)               <---------MYB52(1)                                  <---------ARR11(3)              --------->LBD16                                  <---------ARR14(2)            <---------LBD16 --------->TOE1(3)           --------->MYB52(1)           ---------->DOF2                    -------- -->GT1----------->GT1       ---------->DOF2           --------->TOE1(3)                 --------->YAB1 ---------->RAV1(2)       --------->At4g35610         <---------At4g35610        ------>ZmHOX2a(1) ---------GT1   ----------->GT1  <------ZmHOX2a(1)    --------->At4g35610    <---------ARR11(3)     <   taacctgaagagcaaaaacagcaaaataagctaaaggatattcaagccatttcggaagcttaaagctccggtgagccaagttcctatggtatgagaatgt  1940200                                     --------->TOE2(3)                                   --------->SPL7                                <---------MYB59  <---------------AGL15                             --------->MYB52(1) ----------------->AGL2                          --------->ANAC46      <-----------------AGL2                 <---------ANAC58 ------>MYB83  ----------------->AGL3                       --------                 <---------ANAC58 --------->MYB52(1)                                  --------->ZAT18       <---------ZAT14    --------->ANAC58  <---------ANAC58        <------NtERF2     <---------ZAT14       --------->ZAT14    --------->ANAC58  <---------ANAC58       ------>NtERF2      --------->ZAT14    <---------ANAC46   --------->ZAT18    --------->ICU4----------->GT1               <---------ZAT18 ->GLK1(2)       <---------ANAC46 ------>MYB46(1)--------------->AGL15            --------->DAG2    - ---------At4g35610    <---------ZAT18 <---------MYB52(1)  <---------AHL20(2)    ---------->DOF2-----   gatgctgagtgaagtcaatgcgtagagcacgaaaccgaaccgtaatgcttcccatttgtagttaaatggtgccaagagacacaaaaagtgcacattgata  1940300                                                                        <------NtERF2                                                                        --------->ATERF1(1)                                                                       --------->ABI4(2)                                                                       <---------RAP2.3(1)                                                                       ------>NtERF2                                                                      <---------DEAR3(1)                                                                      --------->DEAR3(1)                                                                     --------->RAP2.3(1)                                                                    <---------ATERF1(1)                                                                   --------->ANAC46                                                                   --------->TGA1a                                                                   <---------TGA1a                                                                   ====================bZIP_DOF                                                    <----------DOF2<---------O2      ------->GAMYB                                 =========================bZIP_DOF   <---------DOF5.7(2)                         --------->ANAC46    --------->O2  <---------WRKY38(1)     --------->ANAC58     <---------RAP2.6(2)<---------At5g28300  <---------WRKY12        --------->ANAC58   <-----------GT1------>ZmHOX2a(1) --------->DOF5.7(2)      --------->MYB46(3)--------->ARR14(2)    <---------LBD16 ->YAB1           --------->RAP2.6(3)       <---------ARR14(2)   --------->MYB52(1) -------->At5g28300     <---------ALFIN1  ------->TEIL     --------->TOE2(3)<----------DOF2 ---->MYB52(1) <---------AHL20(2)      <---------YAB1   <-----------GT1<---------ATERF1(1)     <-----   acggttaacgctcgtattatatcggcccacgaccattctctatgaatatacggccttttttccttactcacggcgcctcttttgttagagccatcttctc  1940400                            <---------MYB46(3)                           <--------P                     *TSS        <---------ZAT14                   <---------MYB52(1)                    ------->TEIL --------->ZAT14                  <-------GAMYB               --------->ATHB12    --------->ZAT6             --------->MYB46(3)              <---------YAB1     <-----------GT1                   <--     <------ZmHOX2a(2)<---------ANAC46       --------->ICU4   --------->AHL20(2)                <---- ----------AGL15 <---------MYB46(3) <----------DOF2 <---------AtLEC2--------->ANAC46   <---------ARR14(2)   taatgggatcacacatcgaccgttgaggggttgtttttctttgagttatgatttgtatgaacattttaacactgaacaacgtatgagtatatatgggcta  1940500                    <---------TGA1a                    --------->TGA1a                    <---------ANAC58                    <---------O2                    <---------bZIP60(2)                    --------->O2                 <---------DEAR3(1)                 --------->ETT(2)                 --------->DEAR3(1)             --------->SPL7             <-------TEIL           --------->TOE1(2)           <---------SPL7          --------->ANAC58          --------->ANAC58          <---------ANAC58          <---------ANAC58         --------->SPL7         --------------->AtSPL3         <---------TOE1(2)         <-------TEIL         ------->TEIL       ------------------>SPL14       <---------SPL7      <---------ANAC46      <---------ANAC58      <---------ANAC58      <---------ANAC55(2)                    <-----------GT1     <-----------------------TaNAC69(2)     --------->WRKY38(1)     <---------------AtSPL3                 --------->WRKY12  --------->ZAT18 <-----------RAV1(1)<---------ANAC46      <------------CBF ---------->DOF2 <---------REM1(1)  <---------ANAC58   ------------>CBF --------->TOE2(3) <---------MYB46(3) ==================================================bZIP_DOF ---------RAV1(1)<---------ETT(2) <---------AHL20(2)--------->YAB1 <---------ARR14(2)      <---------AHL20(2) --------CBF ------->TEIL      ----------->GT1     <---------ATHB12--------->ARR14(2)     --------->AHL20(2)   ttgttgttgcgtacgtacgtcgacgtgtccaagtagttaaatgcaattgaccactcatcgtaaatgccctatctacttcttccatttgcatatttaatac  1940600                                                                         --------->AHL20(1)           <-------MYC3                                                  <---------AHL20(1)           <-------MYC2                                             <---------AHL20(1)           ------->MYC3                                            <---------AHL20(2)           ------->MYC2                                          --------->AHL20(2)           <-------MYC4                                         <---------AHL20(1)        <---------ALFIN1                                   --------->AHL20(2)    <-----------GT1      ----------->RAV1(1)                                  <---------AHL20(2) <---------AHL20(2)    <------NtERF2          ---------->CDC5             <----------DOF2   <---------AHL20(2)    --------->At4g35610   ------>ZmHOX2a(1)           <---------DAG2--------->AHL20(1)   ------>NtERF2  <-----------GT1              <-----------GT1  --------->AHL20(1)            -------   tctggcaccagcacatgttttcactctcctcagcgttgaaataagtttgtttccagccttttttaatatatatattatattttataccattatctaaaaa  1940700                                            --------->MYB52(1)                                           --------->ZAT14                                         <---------ANAC55(2)                          --------->At4g35610                                         --------->ANAC55(2)                     --------->GLK1(1)                                         --------->ANAC46                        --------->CCA1(2)                                         --------->ANAC55(1)                    <---------ARR11(3)                                    ------->GAMYB                        <---------YAB1                                   <---------MYB52(2)                   <---------AHL20(2)                                   <------------MYB.PH3(2)              --------->AHL20(2)                                   <---------MYB111(1)               <---------ARR14(2)                                   <---------MYB46(2)                --------->ARR14(2)        ------                                   --------->MYB46(3)        --------->LBD16    --------->ARR11(3)                           --------->ANAC46<---------ZAT14 <---------LBD16--------->YAB1------->GAMYB  <---------ICU4        --------->ZAT14--------->ZAT6------->TEIL    <---------ARR11(3)--------->MYB46(3) --->DOF2       <-----------GT1<---------At4g35610<---------ANAC46  <------ZmHOX2a(1)--------->MYB52(1)   gaaaacattactactatatatccatctacactcagcaactaacacttaactggtgtatgtctccggatgaggattttaataagatatcaacggccaaaga  1940800                                                                                 <---------ANAC46                                                                                 --------->RAP2.6(2)                                                                               ------>NtERF2                                                                              --------->LBD16                                                                             --------->ANAC46                                                                            <---------LBD16                                                                         <-----------GT1                                                                      --------->ARR11(3)                 ------->TEIL    <-------TEIL<---------ARR11(3)       <---------ARR11(3)          <--   <----------DOF2       <----------DOF2     --------->ARR11(3)       --------->AHL20(1)          <-- --->YAB1     <---------ATHB12   --------->WRKY38(1)                 --------->AHL20(2)<---------AHL20(2)   taaaactttactccaaatgaatctctactttcacgttcaccataacaaatctttggcttcatttcttacaaatatatacccggccgtatatatatgaaga  1940900                              --------->ANAC55(1)                              <---------ANAC55(2)                              --------->ANAC46                              --------->ANAC58                              --------->ANAC55(2)                              --------->ANAC58                  --------->TGA2(2)                 <-----------TGA1                --------->bZIP60(1)                --------->ANAC55(2)                <---------bZIP60(1)                --------->ANAC58                --------->TGA2(1)                <---------ANAC55(2)       ---------->DOF2       <---------LBD16     <---------YAB1    ---------->DOF2                                                            <--   --------->ATHB12  <---------YAB1                                                              ----  <---------YAB1--------->ANAC58                                                --------->At4g35610 --------DOF2   --------->ANAC46                      --------->AtLEC2   --------->HSFB2a(2)    <---- -------DAG2    <---------TGA2(1)                <---------MYB52(1)<---------TOE1(3)    <---------ARR11(3)   ctttatgattaaagacttacgtcatgaaagacacggaatttgatgccatccgtttcatgcagtgattttaagcttcgagggcatctacaatatcccaaga  1941000  Previous    Next  AGI:  At1g06360.1    Description:  fatty acid desaturase family protein. Identical to Delta-9 desaturase-like 5 protein [Arabidopsis Thaliana] (GB:Q9LMI3); similar to fatty acid desaturase family protein [Arabidopsis thaliana] (TAIR:AT1G06350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62719.1); contains InterPro domain Fatty acid desaturase, type 1, core (InterPro:IPR015876); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, C-terminal; (InterPro:IPR001522); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257) Range:  from: 1938962    to: 1940458    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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