Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ARR14(2)          <---------ARR14(2)          <---------ARR11(1)                                                   <-----------GT1          --------->GLK1(2)                                                <---------AHL20(2)          ------->TEIL                                                   <---------AHL20(2)         <---------GLK1(2)                                              <---------AHL20(1)    <---------SPL7                            --------->MYB46(3)        --------->AHL20(1)  <------NtERF2                              --------->ANAC58           --------->ARR11(3) <------NtERF2                               --------->ANAC58           <---------ARR11(3) ---------HVH21                              --------->ANAC46           --------->AHL20(2) -------PCF2                            <---------At4g35610             <---------AHL20(2) --------->YAB1 --->ALFIN1     --------->ZAT14         --------->At4g35610      --------->LBD16        --------->YAB1 ----RAV1(1)    <---------ZAT14       ------->TEIL         <------ZmHOX2a(2) <---------AHL20(2) -DOF2   <---------ARR14(1)     --------->TOE2(2)   --------->ATHB12   --------->AHL20(2) <---------ATHB12   ggtcgcggtccgaatctgtgaactggtgatggaacctatgtatgctcacccaatccattggatcaccctgaaaatatattttttcttctctaatcatata  1936400                --------->ANAC58                --------->ANAC58    --------->ZAT6                                    --------->At4g35610              ---------->DOF2  ----------->GT1 <---------GLK1(2)      --------->TOE1(3)         ---------->DOF2       <---------MYB46(3)                    ----------->RAV1(2)     ---------->DOF2  ----------->HVH21      ----------->ARR10 <---------ZAT6         <---------At4g35610   cttgggaaaaagaaagaaaagcatttgacatggtggtaacacttagttagattctcaaaacgctggtgttaacctgaagagcgaaaacagcagaataagc  1936500                                                                                                  ---                                                                                                <----                                                                                                <----          --------->ANAC46                                                                      <----     --------->KAN4(2)                                                                          -----    --------->KAN4(1)                                                               --------->ANAC46    <---------KAN4(1)                                                            <---------WRKY12 ---    --------->GLK1(1)                                                            <---------WRKY45 ---    <----------TaMYB80                                                      --------->ZAT18     <----    <---------GLK1(1)                                                       --------->ZAT14     -----   --------->ARR14(2)                                                       <---------ZAT18     <----   <---------ARR14(2)                                         --------->GLK1(2)  <---------WRKY38(1)   --------->ARR11(3)                             ------>ZmHOX2a(1)         <---------ZAT14    ------   <---------ARR11(3) --------->ARR11(3)      <---------ARR11(3)     <---------At4g35610       ------  --------->YAB1     <---------CCA1(2) <----------ARF1    --------->YAB1 <---------ANAC46   ---------   ccaaggatattcgagccattttggtatcttgaagctacggtgagacaagttcctatggaatgagaatgtgatgctgagtgtagtcaacgcgaagagcacc  1936600      --------->TOE2(3)      ----------->GT1      --------->TOE1(3)    --------->SPL7   ------>MYB46(1)   --------->MYB52(1)   ------>MYB83 <---------MYB59 --->MYB83 -----MYB52(2)                       <------NtERF2 -----MYB55(2)                      ------>NtERF2 -----MYB46(2)                     --------->DEAR3(1)                                           ----- ---->MYB46(3)                    --------->RAP2.3(1)                                         ------>MYB83 --->MYB46(1)                    <---------RAP2.3(1)                                          ------>MYB46(1) ------>MYB52(1)                 <---------ATERF1(1)          --------->YAB1                 -------- -----MYB111(1)                  <---------DEAR4(2)    <---------ZAT14            --------->ANAC46 ---->AtMYB61                   --------->ANAC46       <---------ZAT18            --------->ANAC58 -----MYB111(2)   <---------------AGL15                --------->ZAT14            --------->ANAC58 --->ANAC58       --------------->AGL15                --------->ZAT18           --------->SPL7------ --->ANAC58      ----------------->AGL3            --------->DAG2      ----------->HVH21    --------- >ZAT18  ---------->DOF2 ----------->GT1          ---------->DOF2  --------->MYB46(3)      --------->MYB46(3)   aaaccgaaccgtaaagcttcccatttgaagttaaacggcgccaagagacacaaaaagtgcacaatcacaacgactgacgctcttacgacatcgaccaacg  1936700                                                    <---------At4g35610                            <---------AtLEC2        ----------->RAV1(2)                       <----------DOF2              --------->At4g35610                --------->ANAC46              <---------At4g35610 -->GAMYB       --------->ANAC58              --------->At4g35610 ->MYB52(1)     --------->ANAC58        <---------ALFIN1 --->MYB46(3)<---------ARR14(2)        --------->MYB46(3) >AtMYB61    --------->ARR14(2)      --------->ANAC46 --------->ALFIN1       <------ZmHOX2a(2)   gccattgtctctgaaaatacgccctcttttgcatagtactcaccactctgcttcggctggagccatcgtctctagtgggatcacacatatcgacgaattg  1936800                                                                            ----------->GT1                                                                         --------->ANAC46                                                                        --------->LBD16                                                                        <------NtERF2                                          <---------ARR14(2)          <---------LBD16                                         <-----------TBP         ---------->DOF2             <-------                          --------->TOE1(2)                  <---------bZIP60(1)    ------------>CBF                  *TSS  ------->TEIL <---------ANAC46   <-----------RAV1(1)<------NtERF2  <----------   tatttgtttgagttataagttgtatgaacataagagactgggtatatatgggctgatactgtggcatcaaagtccgcgtcgttaaatgcaattcaccact  1936900                                                            <-------MYC4                                                 --------->LBD16                                                 --------->ANAC46                                                <---------ATERF1(2)                                                --------->ATERF1(2)                                               <---------LBD16                                               --------->RAP2.6(3)                                      <----------DOF2       ------->MYC2                           <-                                      --------->TOE2(3)     <-------MYC3                           --                            <---------AHL20(2)--------->MYB52(1)   <-----------GT1      <---------ANAC46 --ALFIN1     --------->ETT(2)       <---------ICU4         ------->MYC3                <---------ANAC58 -GT1         <---------ETT(2)   <---------AHL20(2)         <-------MYC2                <---------ANAC58   ctccataaatgctctgtctacctcttccattttttttaatctttaatataccggcaatagcacatgttttcacaaattcaaacaagtttttcttgtagcc  1937000                   ------->GAMYB                  --------->ANAC58                   <---------TOE2(3)                  --------->ANAC46                  <-----------GT1                  --------->ANAC58                  --------->MYB52(1)               <---------WRKY38(1)             --------->AHL20(1)                                ----            ------->GAMYB               <---------ANAC58                                     --------           --------->MYB46(3)           <---------ANAC58                                     --------          --------->SPL7                <---------ANAC46    <---------AHL20(2)            <----------         --------->MYB52(1)<----------DOF2     <---------AHL20(1)   <-----------ARR10  --------->YAB1 --------YAB1  <---------WRKY12         <---------ANAC55(2)<---------AHL20(2)        --------->ICU4-- --------->HVH21<---------ATERF1(1)     ----------->GT1    --------->AHL20(2)    --------->GLK1(2) --   tctgatagtcccaacggccaacgccatttcttttgcaaaatttcgtaaaaatattaacgaattaaatgcgaagctaatccaagaatcaatattaacctta  1937100                                                                                               ------                                                                                              <------                                                                                            ------>ZmHOX2a(1)                                                                                          ------>ZmHOX2a(2)                                                                                       --------->GLK1(1)                                                                                  <---------ZAT2        <-----------GT1                                                           <---------ZAT14 ---      <----------DOF2                                                             --------->ZAT2 <--- ----------->STF1                                                                ================HOX2a_HOX2a ----->ANAC55(2)                         --------->ANAC46                        ===============HOX2a_HOX2a ->TOE1(3)<---------ANAC58       <---------ANAC58 --------->ARR11(3)  <---------AHL20(2) <------ZmHOX2a(2) ->TOE2(3)<---------ANAC58       <---------ANAC58 <---------GLK1(2)   <---------AHL20(1)--------->ARR14(2) -GT1 <---------DAG2             <---------ANAC46 <---------ARR11(3)  --------->AHL20(1)<---------ARR14(2) --------->HVH21    <-----------HVH21    --------->ANAC58             --------->ARR11(3)<---------ARR11(3) --------->TGA1    --------->ANAC46      --------->ANAC58       <----------DOF2  ------>ZmHOX2a(1)---   ggtgacgactttacgttctatccgtctcatgcgatgcttatataagctactagattttctaaatctctttaatatatagcatcctgcagggatcctataa  1937200          --------->CCA1(2)                                                                    <-----         --------->AHL20(1)                                                                   <------ --->YAB1<---------AHL20(1)           <---------TOE2(3)                               <---------ANAC58 ---YAB1 <---------ARR11(3)           <---------TOE1(3)     <---------ARR11(3)        <---------ANAC58 ------>YAB1                       --------->DOF5.7(2)      --------->ARR11(3)        <---------ANAC46 ------YAB1                     ---------->ID1     <----------DOF2  ---------->ID1<---------ANAC58<-- ----->HAHB4          <----------DOF2<---------DOF5.7(2)   <---------At4g35610    <---------ANAC58<--   taataggccaatatataagtttttcttttgttttgttgttaacgtttttttttctttggtgagatgttttgttgttaatgtgaagcttgcttctaatata  1937300  Previous    Next  AGI:  At1g06350.1    Description:  fatty acid desaturase family protein. Identical to Putative delta-9 desaturase-like 4 protein [Arabidopsis Thaliana] (GB:Q9LMI4); similar to fatty acid desaturase family protein [Arabidopsis thaliana] (TAIR:AT1G06360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62719.1); contains InterPro domain Fatty acid desaturase, type 1, core (InterPro:IPR015876); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, C-terminal; (InterPro:IPR001522); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257) Range:  from: 1935292    to: 1936818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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