Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ----------->GT1                                     ----------->RAV1(2)                                    ------>ZmHOX2a(1)  --------->ANAC58         --------->ICU4  --------->DAG2             <---------GLK1(2)         --------->ANAC58   <---------LBD16 ---------->DOF2          --------->DAG2         --------->TOE1(2)       ----------->RAV1(2) ------>YAB1             ---------->DOF2         <---------LBD16  ----------->GT1 --------->WOX13(1) ------YAB1        --------->At4g35610          ----------->RAV1(2)    <---------ALFIN1  ------->GAMYB --->YAB1          <---------At4g35610 ------>ZmHOX2a(1)        ---------->DOF2 <---------ATHB12   taataaagtcattaacttggcatctgaaaaagcttctcctcctgtagtaaacctggaacgtaaacagaaagtaacacctggaatcattcaacgctcttaa  1919400                                                        <---------AHL20(2)                                                       <---------AHL20(2)                                                       <---------AHL20(1)                                                       --------->AHL20(2)                                         <---------AHL20(2)            --------->LBD16                                       <---------YAB1  --------->ARR11(3)           <---------GLK1(1)                                    <---------YAB1     --------->AHL20(1)      <---------LBD16                              --------->DAG2           <---------ARR11(3)   --------->ALFIN1                            ---------->DOF2           --------->AHL20(2)<---------MYB52(1)  ---------                   <-----------GT1  <---------------AGL15            <---------LBD16--------->GLK1(1)               --------->WOX13(1) <-------TEIL      --------->AHL20(2)<---------LBD16  --------->YAB1   ctaatgtcgatgatgttcaattaaccccttaaaaggttcttattttagtggcaaaaatatattttctgcaaaccgggagtttggggaaatcatataaagt  1919500                                                <---------LBD16                                              --------->GLK1(2)                                             --------->KAN4(2)                                            <---------KAN4(1)                                         <------ZmHOX2a(1)                                      <------ZmHOX2a(1)           --------->At4g35610                                   <---------HSFB2a(2)            <---------ZAT2                 <---                                   <-----------RAV1(2)            <---------At4g35610  <---------ANAC58         <---------ANAC46         --------->TOE1(2)<---------MYB52(1)                  <---------ANAC58         <---------ANAC58 --------->ANAC58  --------->KAN4(1)   --------->ZAT18  <---------ARR11(3)  --------->TOE2(3)    <-------TEIL<---------LBD16--------->LBD16 --------->ZAT2 <---------GLK1(2) ->DOF2  <---------ANAC58 --------->ANAC58 <---------KAN4(2)    <---------ZAT14  --------->ARR11(3)   catacctgaatgcgtttaagacaggttcaagctaatcccaggaggaataatccggtaatgggagagtgagctgggaagaacgagattttgcttcacagag  1919600                  --------->ANAC58                  --------->ANAC58                  <---------DEAR3(1)                 --------->SPL7                                                            <---------ANAC55(2)               <---------ZAT14                                                             --------->ANAC58          --------->MYB46(3)                                                               --------->ANAC55(2)         --------->SPL7                                          ----------->GT1           --------->ANAC58  <---------YAB1 --------->RAP2.6(3)     <---------ATHB12  <---------TOE1(3)               --------->ANAC46 --------->ARR11(3)      <---------ARR11(3)                <---------TOE2(3)        ----------->GT1 <---------ARR11(3) <------NtERF2--------->ARR11(3)    <---------ANAC58       ---------->DOF2     --- ---ZmHOX2a(1) <---------SPL7    <---------ARR11(3)    <---------ANAC58     <------ZmHOX2a(2)     ---   gaatatcatcgaacgactggacggcaagatgtgaagaactcaaatgaatagacgatgacttgaggtttagtaaatcggatcaaagtgagtaatacgaaac  1919700                                                              <------ZmHOX2a(1)                                                            --------->MYB59                                                           *TSS                    <---------YAB1                                <---------GLK1(2)         --------->ICU4      <---------ANAC58                                <---------ARR14(2)      --------->ATHB12      <---------ANAC58                     <---------MYB52(1)              <---------ANAC46    <---------HSFB2a(1)             ------>ZmHOX2a(2)  --------->ARR14(2)   <---------ANAC58    --------->HSFB2a(1)       <----------DOF2 <---------MYB46(3)            <---------ANAC58   --------->GLK1(2) ------>ANAC58  <---------ARR14(2)          <---------At4g35610        <---------GLK1(2)            < ------>ANAC58  --------->ARR14(2)          --------->At4g35610---------->DOF2<---------ANAC46     <-   acccatgagctttgatcgaatacgtttgttcacagatttgatatgtagcagaatggtgtgattaggaaagaaggaatcttgcgttttgattctatcagcc  1919800                                                                     <------MYB46(1)                                 --------->ARR11(3)                  <---------DEAR3(2)                                 <---------ARR11(3)                  <------MYB83                               --------->ARR14(2)                   <---------DEAR3(1)                           <---------LBD16                         <---------ORA47(1)                          -------->P                            --------->MYB59                         ------>MYB46(1)                    <---------GLK1(2)           <---------TOE2(3)   <---------ARR14(2)         --------->LBD16           <---------TOE1(3) --------->LBD16             --------->ANAC46    ----------->RAV1(1)       <----------DOF2   --------->MYB52(1)             <---------LBD16 <-------TEIL       <---------GLK1(2) <---------MYB52(1)      ------>MYB83            <---------ANAC46<------MYB83--------->RAP2.6(2)   -- -------GAMYB          --------->AtMYB61        <---------TOE2(3)<------MYB46(1)           --------->ARR14(2) ----------RAV1(1)     <---------MYB59 ---------->DOF2<-----------GT1<---------MYB46(3)    <---------ARR14(2)   tctgttgggctttgaggttttaaaacctaaccggatatattcaaagggtttacgtttaaccggaatttggtcggttcagccacaaaaatttcagatttgg  1919900                                            --------->ALFIN1                                          <---------ANAC55(1)                                          <---------ANAC58                                          <---------ANAC46                                          <---------ANAC55(2)                                          <---------TGA1a                                          --------->TGA1a                                          --------->O2                                          <---------O2                                 ----------->GT1                                   <---------LBD16                              ------->TEIL                                   <-----------RAV1(2)                       --------->ANAC58                              <---------AHL20(2)                      ----------->GT1<---------ATHB12                             --------->AHL20(2)    --------->AHL20(2) --------->ANAC55(2)          --                   --------->AHL20(2)     <---------ANAC58      --------->AHL20(2) --------->WOX13(1)       ----------->GT1    ------>ZmHOX2a(1) ----------->GT1   ----------->GT1--------->AtLEC2      <-   <------ZmHOX2a(1) <-----------GT1  <------ZmHOX2a(1)----------->GT1<---------ANAC55(2) <---------ICU4 ------->TOE1(2)   <---------AHL20(2)<---------At4g35610<-----------HVH21    --------->ANAC58<-------   acctaggaatagttaacaaattttaatcctataaaattcaggagacgtgtgaaaaaaatgtcaaatgtaaatatgtaacatgcaccaattagtaattaca  1920000                                                                            --------->ZAT14                                                                            <---------ZAT14                                                             --------->TOE2(2)                                                     ----------->GT1 <---------REM1(2) ------->GLK1(1)              ---------->ID1         <----------ID1<---------ETT(2) --------GLK1(1)        --------->ATHB12           ---------->DOF2 --------->ETT(2) ----GT1         --------->ZAT6           <---------YAB1     --------->TOE1(2)    ----------->GT1   -   gaactctgtttttggtctaacaccattgatttgtccattacattatgcatacaaaaagaaaaacctaggtctacatagttcagagtgaaaaaaaaacttt  1920100                                                   <---------ANAC55(2)                                                   --------->ANAC55(2)                                                 <---------ICU4                                             --------->AHL20(2)                                             <---------AHL20(2)                                           --------->TOE2(3)                                           --------->ANAC55(2)                                        --------->ARR14(2)                                        ---                                        <---------ARR14(2)                                        <--                                     <---------ANAC46                                <---------YAB1                                     <---------ANAC58                       --------->RAP2.6(2)<-----                                     <---------ANAC58      <-----------GT1  ----------->GT1   <------ ----->ZmHOX2a(2)               --------->YAB1  --------->ICU4<----------DOF2--------->At5g28300  ---   gatctaatcttcaaatttcatagccaattccaaattatagcgtatacttaattatgtgattttactttcgcaagatggccgtaaaatatgactgaattac  1920200                                                                                     <---------DAG2                                                                                  <-----------GT1                                                                                  <---------AHL20(2)                                                                               <---------ICU4                       --------->ANAC46                                        --------->YAB1                      <-------TEIL                                            --------->ICU4                     --------->CCA1(2)                                        <---------YAB1                    --------->ARR14(2)                                       <---------AHL20(2)                    --------->ARR11(3)                                       <---------AHL20(1)                    <---------ARR11(3)                                      --------->YAB1                    <---------ARR14(2)              <---------YAB1         <---------YAB1                --------->LBD16                   <---------ICU4          --------->TOE2(3) ------>ZAT18  --------->LBD16       --------->ANAC58                    <---------ICU4 -------ZAT18 <---------HSFB2a(2)    --------->ANAC58  <---------YAB1    --------->YAB1 ----At5g28300--------->HSFB2a(2)    --------->ANAC46--------->YAB1    <-----------GT1 -----GT1<-----------GT1    --------->ANAC58  --------->YAB1 <---------ANAC46--------->AHL20(2) ------>LBD16<---------LBD16--------->ANAC58  --------->AHL20(2)   --------->CCA1(2) <----------DOF2<   cgcacaaggttttactcccgaagatacaccacgaattgcaagaaacaattaaaaattatagttacttagatataaacattataattactttttttttttt  1920300  Previous    Next  AGI:  At1g06270.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G09900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69832.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 1918087    to: 1919759    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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