Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->TOE2(3)                      ------->TEIL                      --------->ANAC46             --------->ANAC58                      ------->GAMYB                --------->ANAC46                      --------->ANAC58             --------->ANAC58                            <-----                      --------->ANAC58           <---------ALFIN1            <----------DOF2   <-----                      --------->RAP2.6(2)       --------->ZAT14    ----------->HVH21           ------      <---------LBD16--------->MYB46(3)         <---------REM1(2)------>ZmHOX2a(1)           <------- <---------DAG2     -------->P<-----------GT1   <---------ZAT14  <----------DOF2    <---------YAB1 <----------DOF2  --------->MYB46(3)     <---------MYB52(1)<-------TEIL---------->DOF2---------->DOF2   tcgcttttccctggtctgtagcaaccgcaatgtaacccatccagttagtctgcacgcgagatgcatcctttgacaaagactttacgatgaaagagattgg  1914500                      --------------->AtSPL3                 <---------ANAC46              <---------MYB52(1)            <-----------RAV1(1)     <---------TOE2(3)<---------------AtSPL8                    --------->At4g35610     --------->HSFB2a(2)                                        <---------At4g35610     <---------HSFB2a(2)                               --------->YAB1 <----------DOF2 <---------ANAC58                --------->ARR11(3) <---------DAG2  <---------ANAC58                <---------ARR11(3) -MYB83   <---------At4g35610                    --------->GLK1(2) -MYB46(1)--------->At4g35610        --------------->AtSPL8  <--------P ----->GT1<---------ZAT2  ------->TEIL   ------->TEIL <---------ATHB12 --WOX13(1) <---------MYB46(3)      <----------DOF2 --------->WOX13(1)           ---------->DOF2   taactttatggaagctgttgcgtagatgtacttagtcactttgtacctgaaaatctatcatgggtaagcttacatcgtcgaatcaaagatgaaacattgt  1914600                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                                   <---------ARR11(1)                                                                                   --------->GLK1(2)                                                        <---------MYB46(3)         ------->TEIL                                                       <---------ARR14(2)          <-----------ARR10                        <----------DOF2              <---------DEAR3(2)           <---------ARR14(1)                     <------MYB83                    <------MYB46(1)            <---------ANAC58                     <------MYB46(1)                 <------MYB83               <---------ANAC58                   <--------P                       <---------DEAR3(1)        --------->LBD16             ---------->DOF2                     ------->GAMYB              <---------LBD16           ----------->HVH21               <---------At4g35610             --------->MYB52(1)<-------          --------------->AGL15            --------->At4g35610         --------->WOX13(1)   ---------          ===========================================================================================         --------->At4g35610  <------ZmHOX2a(1) --------->MYB46(3)  --------->YAB1<---------CCA1(2)         ----------------->AGL1     <---------DEAR3(2) --------->ARR14(2)--------->MYB46(3)<---------SPL7    <---------------AtSPL8  <---------TOE1(3)   --------->ZAT6----------->GT1--------->DEAR3(1)    --------------->AtSPL8  <---------TOE2(3) --------->MYB52(1) --------->YAB1 <---------ANAC46   --   gggagtatggtacctgaaagggttggctttaaggaagccggttcgagctaacagtcggttcttggagtaataacaatcaccggcgtatctggacttacgg  1914700                                                                    <-----------HVH21                                                                ------>ZmHOX2a(2)                                                                <---------LBD16                                                               --------->ARR14(1)                                                               --------->CCA1(2)                                                               <------ZmHOX2a(2)                                                              <---------ARR14(2)                                                              --------->ARR11(1)                                                              --------->ARR14(2)                                                              --------->ARR14(3)                                                              <---------ARR14(3)                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                             --------->HSFB2a(1)                       --------->TOE2(2)                     <---------GLK1(1)                       --------->TOE1(2)                     <---------HSFB2a(1)                      ----------->RAV1(2)                    --------->GLK1(1)                     -------->P                             ----------->ARR10        --------->ANAC58                   ------->GAMYB                            ---------->TaMYB80  --------->WOX13(1)                  --------->MYB46(3)                     <---------ANAC46     <------ZmHOX2a(2)     ---------->DOF2 ------>MYB83                     <---------ANAC46<---------WRKY12 --At5g28300      <---------MYB52(2)                  <---------DEAR3(1)  --------->ALFIN1     <----- >MYB52(1)  <------NtERF2                            <---------At4g35610<---------O2 --------->ANAC58 ================MADS_MADS                       <---------REM1(1)--------->LBD16 --------->ZAT2 --------------->AGL3------>MYB46(1) --------->DEAR3(1) <------NtERF2--------->WRKY18(1) <----------DOF2   tcccagttaaaggcatcgtaaccaacctgagacatctcgccgtagtgaatgatgtagcggcgaagatccgggtcaagtggatcaagcaggcctttccatt  1914800                          <----------DOF2                  ------>MYB83                  ------>MYB46(1)               --------->HSFC1(2)               <---------HSFB2a(1)           <---------YAB1       <-----------GT1             *TSS     <---------ZAT18  <---------CCA1(2) <---------ALFIN1 ---------->ID1   <----------DOF2     ------- ----MYB52(1)  --------->HSFB2a(1)   --------->ANAC46<----------DOF2     --------->TOE2(3)   <-------   tgttttggccacttagcaccttccatctctttggtatgccctccaccatgtttgcctttgtttttttttcacaaacctttttcttcttgttcttgatgtt  1914900                       ---------->DOF2   ----------->HVH21                   <---------ANAC58    <---------ANAC46                   <---------ANAC58    <---------ANAC58  ----------->GT1  <---------ANAC46    <---------ANAC58 ------>ZmHOX2a(1)                    <------- -->ATHB12     <---------ANAC46        <---------ANAC55(2)            <-----------HVH21  <----------DOF2 --YAB1 <------------CBF    <------------CBF           --------->TOE2(3)              <---------ANAC46   tggagagtaacattgctccttgtgtgaaagaattggataatgcgtgaaggaaatggtccttaatgtatggcccttcacataaatagtgccggtttaagtt  1915000                                                                                                    <                                                                                                    -                                                                                                    -                                          <---------DAG2--------->WOX13(1)                         <-                                          <----------DOF2                                <-------TEIL         ------->TEIL               --------->ANAC46  <---------MYB52(1)             --------->MYB46(2)     <---------------AtSPL8    <---------ARR14(2)    --------->At5g28300             --------->MYB111(1)     --------------->AtSPL8    --------->ARR14(2)   ----------->GT1                  --------->MYB52(2)     <---------------AtSPL3   <------ZmHOX2a(1)  --------->MYB52(1)                <---------MYB52(1) <---------AHL20(2)         <---------TOE1(2)   <-----------GT1                   ------------>MYB.PH3(2) --TOE2(3)       <-----------GT1  <-----------GT1<-----------GT1                 <---------ZAT6    --   tattttaagtgtacgtttattacaaatttgtaggattcacatcactttttttaacggttaatcaacgcttaaaacatgtactattgttagttacatcgaa  1915100         ---------->DOF2        <---------AHL20(2)                                                                <---------ANAC58        --------->AHL20(2)                                                                <---------ANAC46    --------->AHL20(2)                                                                    <---------ANAC58    --------->AHL20(1)                                  ------>MYB46(1)                <-------PIF5    <---------AHL20(2)                                  --------->MYB52(1)             ------->PIF5   <---------AHL20(2)                                   ------>MYB83                <-----------RAV1(2)   --------->AHL20(2)                   --------->AHL20(2)      --------->HSFC1(2) --------->ZAT2 ---------AHL20(2)                      <---------AHL20(2)      <---------HSFC1(2) <---------ZAT2 -------->AHL20(2)                     <---------AHL20(2)   --------->LBD16 --------->ARR14(2) -------->AHL20(1)           <---------ANAC58         <---------MYB59       <---------ARR14(2) --------AHL20(2)            <---------ANAC58         --------->AtMYB61  <---------HSFB2a(2) ------->AHL20(2)     ------>ZmHOX2a(1)--------->AHL20(2) <---------LBD16--------->HSFB2a(2)  <------   attaaattaattaaagactatttcctctatagcctgtctaattttattcggctaaaccaaaccggaaacatctatccagaaccgaagcaggggcttatac  1915200                                                                                                    -                    <-------TEIL                                                               <-----                <---------TOE2(3)      <---------MYB52(1)                    <---------YAB1   -------                --------->DAG2    <---------WRKY18(1)                  ------>NtERF2          <------    --------->MYB46(3)           --------->WRKY12                 --------->ZAT14           <-------- ---YAB1        <---------TOE1(3)----------->HVH21                <---------ZAT14      --------->GLK1(2)   ttagcgaccagcgttgttaaggtgcaattgagtacttgaccggtgagtttcaatgtattcatgttctctgctctgcctcattcttgaagattccattatc  1915300                                                                                                    <                                                                                                    -                                                                                                    =                                                                                                    -                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--  <---------YAB1                                                                                 <--- -------->YAB1                                                         --------->ANAC46       <------ ----YAB1<---------ANAC46                             --------->ANAC58 --------->ANAC58     --------- -->ARR11(3)                                          <---------ANAC55(2)                   <-------- ---ARR11(3)     --------->TOE1(3)            <-----------GT1     <---------ZAT18           <-------- -MYB52(1)      ----------->RAV1(2) ---------->DOF2   --------->ANAC58 --------->ANAC58     ---------   tttcatcaatggtttggaacctgaaactaaatttctcaaaaagagttgtcaccatcaagtaagactggttcgctcgccagagcatgttgtctaatatctg  1915400  Previous    Next  AGI:  At1g06250.1    Description:  lipase class 3 family protein. similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT4G18550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48079.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) Range:  from: 1913255    to: 1914894    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g06265.1    Description:  other RNA Range:  from: 1914942    to: 1917660    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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