Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ICU4                                                <----------ID1                                              ---------->DOF2--------->TOE2(3)        --------->TOE2(3)                              --------->WOX13(1)----------->GT1                       <----------DOF2                          --------->YAB1 --------------->AGL15                ----------->GT1  <---------ICU4         --------->ICU4  <---------------AGL15<----------DOF2--------->ATHB12   atcaacatcacttagtttgtatttgaaataatcaatctatatactaaaaaaagaaaaacattacctttataacaaaaaatgagtgaaactttaatggaat  1906700                                                        <---------AHL20(2)                                                      <---------CCA1(1)             --------->ANAC55(2)                                                      <---------RVE1(1)             <---------ANAC55(2)      <---------At4g35610                            <---------ARR11(3)       --------->At4g35610   -      --------->At4g35610                            <---------GLK1(2) <---------ANAC58             <      --------->ZAT2 ------->TEIL              --------->ANAC58        <---------ANAC46            <-     ----------->RAV1(1)  ---------->DOF2      --------->ANAC58<-----------GT1<---------At4g35610  -- <-----------GT1----------->GT1   --------->YAB1     --------->ARR11(3)<---------ANAC58    <---------   ttttcaccagcagaaatatagtgaatctaaaagcattcaaaattttctgaagcaagatttttttttttcaattgcttgtcagcatcacatatttgtcaga  1906800                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                        <---------AHL20(1)                                                                                       <-------------                                                                                     <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                            <----------DOF2                                       --------->TOE2(3)  --------->ICU4           <---------ANAC58                                  --------->AHL20(2)  <---------YAB1           <---------ANAC58                                --------------->AGL15 -------->YAB1       --------->GLK1(2)                                     --------->TOE2(3) -------- ---------ICU4       --------->ARR11(3)                                    --------->TOE1(3) <------- --------ATHB51      <---------ARR11(3)           <---------YAB1           <----------DOF2  --------- ------->ICU4       --------->RVE1(1)           <-----------GT1            ========================== --HVH21            --------->CCA1(1)        <---------ICU4        --------->AHL20(1)--------->AHL20(2)   aataatgaataaacttgacaaaaaatcttgctttagaaaatatacaaatattacaatacatatacaaaatatactaactttaaatattaatttaattagt  1906900                              --------->AHL20(2)                              <---------AHL20(2)                             <---------YAB1       <---------ANAC58                           --------->AHL20(2)     <---------ANAC58 --AGL15                   --------->YAB1       <-----------GT1 ------->AtSPL8      --------->YAB1        <---------AHL20(2) --ICU4           --------->WOX13(1)       --------->AHL20(2)               <---------MYB46(3) >ICU4 <---------TOE2(3)<---------ICU4    <---------AHL20(2)          <-----------RAV1(1) ==MADS_MADS    <---------ATHB12      <---------AHL20(2)         <----------DOF2   accagatttaagaaaaaaatcattcaaaattataaattgttttatttattttacttgagttctctctcttttttgttgttgttgattacagatgtaaatg  1907000                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       <-----------HVH21                                                                     --------->LBD16                           --------->ANAC46                         <---------ANAC58                         --------->ANAC46                           <---------ANAC46                      <---------ARR14(2)                            <---------ANAC58                      --------->ARR14(2)                           ----------------->AGL1                     --------->CCA1(2)                             <-----------------AGL1                   --------->YAB1                                  <---------LBD16      *TSS                  <---------YAB1  --------->ATHB12         ---------->DOF2    <---------WRKY12              <----------DOF2  <------------CBF        --------->TOE1(3)  <---------MYB46(3)        <      ----------->ARR10--------->CCA1(2)               --------->TOE2(3) <---------ANAC46<-----------ARR10   tttatgggtagagcttctttatgatatacgcgaaattgattagtttttaggcccaaacctaaaaagcattccgggtcgggtaaacgagccaaatctaaac  1907100                                          <------NtERF2                                          --------->ATERF1(1)                                         <---------ATERF1(1)                                         ------>NtERF2                                         --------->ABI4(2)                                         <---------RAP2.3(1)                                        --------->RAP2.3(3)                                        --------->DEAR3(1)                                        <---------DEAR3(1)                                        --------->RAP2.3(2)                                       ------>NtERF2                                       --------->ATERF1(1)                                       <------NtERF2                                       --------->DEAR4(2)                                       --------->ORA47(2)                                       --------->RRTF1(1)                                       --------->RAP2.3(1)                                      <---------RAP2.3(1)                                      <---------ORA47(2)                                      <---------ERF1                                      <---------RRTF1(1)                                      <---------RAP2.6(1)                                      <---------ATERF1(1)                                     <---------RAP2.3(2)                 --------->HSFB2a(1)                                     <---------RAP2.3(3)                 --------->HSFC1(2)                                     <---------RRTF1(2)                  <---------HSFC1(2)         <                                     <---------ANAC58                 ---------->DOF2              --                                     <---------ANAC58           --------->ANAC58                  <--                                     <---------DEAR3(1)         ----------->GT1                   ---                                <----------DOF2                 --------->ANAC58           <---------                ------>ZmHOX2a(1)    <---------RRTF1(3)        <---------TOE2(2)           <---------DAG2     <----------DOF2      ------>ZmHOX2a(1)                    <---------TOE1(2)        ---------->ID1 ---------MYB46(3)  <<<<<<<<<TBF1   <---------LBD16           <-----------RAV1(2)      <-----------GT1   gctggttcttttcttctccttcttcttcctctcgctcttgcggcgccttctctctcccaaactcgcaggtaacaaagcttccttcaatttctcctttttc  1907200                                             ------>ZmHOX2a(1)                                             ==========================HOX2a_HOX2a                                           <-----------------AGL1                                       --------->HSFC1(2)                                       <---------HSFC1(2)                                  --------->ANAC46                                 --------->CCA1(2)    <---------ATHB12              --------->ANAC58                    --------->At4g35610  --------->WOX13(1)              --------->ANAC58                    <---------ZAT2           ------ ------ZmHOX2a(2)              ----------->HVH21                      <---------At4g35610      ------ ------->AGP1                  ------>ZmHOX2a(1)            --------->ETT(2)       --------->GLK1(2) -------At4g35610              ----------->TGA1  <---------MYB52(1)   --------->ZAT2<-------TEIL ------>At4g35610            ----------->RAV1(2)<----------DOF2 ------>ZmHOX2a(2) --------->ARR11(1)< -DOF2                    <----------DOF2<-----------GT1   ---------->ID1 ----------->HVH21  <-------   agatcaatcaatttccttctctggttccctttcctgacgcaagtttcctcctttggtttttgtcgatctctaagctcagacagagattcgaatgacctaa  1907300                                           <-----------GT1                                   <---------HSFB2a(2)                                   --------->HSFB2a(2)                  <---------ANAC58                             --------->GLK1(2)                          <---------ANAC58 <---------ARR14(2)         <---------GLK1(2)                           <---------ANAC46 >MYB83                     <---------ARR14(2)            --------->DOF5.7(2) >MYB46(1)                  --------->ARR14(2)            <---------MYB52(1)       <---------GLK1(1) ---------CCA1(2)     <---------REM1(2)   <---------AHL20(2)       <-----------RAV1(1)        ------- --MYB59           <----------DOF2<---------LBD16       <---------MYB46(3)       --------->ATHB12 ---   ttgtatcccgtcttatcgagactttacacagattcttctgggattttatcttacacagtcgttatctacttgttgcgtccaattgatttctctgaatcag  1907400                     --------->ZAT14                     <---------ZAT14                <---------ANAC58            <---------TOE1(2)                                                   <---------TOE1(3)          <---------LBD16                                              --------->HSFC1(1)         <---------ANAC46                           --------->GLK1(2)  --------->HSFB2a(2)         <---------ANAC58                          <---------GLK1(2)   <---------HSFB2a(2) --------->TOE1(3)   --------->ZAT18    <---------ALFIN1           <---------ANAC46 --------->TOE2(3)   <---------ZAT18   --------->ZAT18             <---------ANAC58 -->YAB1 <---------ANAC58     ---------->DOF2   --------->YAB1     <---------ANAC58 ------>GLK1(1) <---------ANAC58       <---------ZAT18       <---------TOE2(3)  <---------TOE2(3)<---   aaaccctaatttcgtgggtcttgtgcagtctctaaagtttgcacactctctcagaatcgagccaaggtttcgtctagaaattagggtttcttagtttttt  1907500          --------->ARR11(3)          <---------AHL20(1)          <---------ARR11(3)        <---------ARR14(2)       --------->GLK1(1)        <---------ARR11(3)       <----------DOF2                                            <--------        --------->ARR14(2)      <---------ANAC58                   --------->DAG2           ---------       <------ZmHOX2a(1)        <---------ANAC58                  ---------->DOF2        <---------TOE2(3)     <---------ANAC46  <---------ARR14(2)                  ----------->TGA1         --------->WOX13(1)  --------->ALFIN1     --------->ARR14(2)                  ----------->HVH21<---------ATHB12<-------- ------AtLEC2         <---------RAP2.6(3)              <------ZmHOX2a(1)  --------->WOX13(1)<--------   catggtggaggatatattttaggccgatttgagggctttccatcagttttaaacggaggaagtgacgaaaaagcatcaatcgagagcaattaaggcgtga  1907600  Previous    Next  AGI:  At1g06230.1    Description:  GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding. similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT1G17790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69846.1); contains InterPro domain Bromodomain (InterPro:IPR001487) Range:  from: 1907088    to: 1910847    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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