Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------SPL7                                                                      ----------->HVH21                   --------->ZAT14                                 <---------ANAC46                   <---------ZAT14                            --------->ABI4(2)             --------->HSFB2a(2)                              <---------MYB46(3)             <---------HSFB2a(2)                             --------->ALFIN1        <------ZmHOX2a(2)                                    <---------DEAR3(1)       --------->AGP1 <---------At4g35610                   <-------GAMYB       <---------ARR14(3)                                  <---------DEAR3(2)       --------->ARR14(2)                                  <---------MYB46(3)               ---------       <---------ARR11(3)                                 <---------DEAR3(1)                ---------       --------->ARR11(3)                     <---------WRKY18(1) <------NtERF2             ---------       <---------ARR14(2)        <-----------RAV1(1)      <---------DREB2C(2)               <--------       --------->ARR14(3)      <---------At5g28300        <---------At1g77200    --------->GLK1(2)      --------->GLK1(1)      <---------MYB52(1)        ------>ZmHOX2a(2)--------->SPL7      <--------      <---------GLK1(1)     <-------GAMYB    ----------->HVH21--------->MYB55(2) --------->ARR14(2)     ----------->ARR10<-------GAMYB          --------->WRKY38(1) <---------MYB46(3)  --------->ZAT14 ->ALFIN1------>ZmHOX2a(2)<---------ANAC46   --------->WRKY12<---------AtMYB61   <---------ARR14(2) -   atgcagagagatcttctagactgcagttgctgttactgttgctaccgatgaccgtgatcgtcggtggtggctcggacggagagaaactgctctcagcagt  1886500     <---------LBD16   <-----------RAV1(1) >At4g35610 >ZAT14                          <---------ARR11(3) >ZAT2  <------NtERF2      --------->ANAC58           ------>ZmHOX2a(1) -ZAT2 --------->LBD16     --------->ANAC58        ------>ZmHOX2a(1) -At4g35610                --------->ANAC46       <---------ALFIN1      ---------->DOF2  ----------->GT1 -------->ARR14(2) <------ZmHOX2a(2)            ------>NtERF2   --------->MYB52(1) ---------->DOF2  -   catttctgccggagcatttggatcaaaacacccaatttcttcaaacatgcctcctcctcccatgaaaaccggtccaaagggctaagaaagatggtttcaa  1886600                                                                                  ------>MYB46(1)                                                                                  ------>MYB83                                                                    <---------ARR14(2)                                     --------->AHL20(1)             --------->GLK1(2)                                     --------->ARR11(3) ------>MYB83--------->ARR14(2)                                  --------->AHL20(2)  <---------MYB59           ------->GAMYB                      --------->ATHB12                --------->TOE2(3)        --------->MYB46(3)   - -------->YAB1       <---------YAB1  <---------AHL20(1) ------>MYB46(1)      <-----------GT1      <--   aatcagaaaacattgacacagttttgatttgctagattatatattgaaaactgcaacctaatcttgaacaaatctgttctaaccaacttaaaaatcgtct  1886700                                                                                           --------->YAB1                                                                                          <---------YAB1                                                                                 <---------TGA1a                                                                                 ====================                               <---------ICU4                                    --------->O2                               --------->YAB1                                    <---------O2                               -------->HAHB4                                   ------>MYB46(1)                              --------->ICU4                                  <---------MYB59--------                              <---------ATHB12                               --------->DEAR3(2)                        --------->ARR11(3)        ---------->DOF2           <---------At5g28300<-----                        <---------ARR11(3)        =========================================bZIP_DOF    --------->At4g35610<---------CCA1(2)     <------ZmHOX2a(1)             <-----------GT1--------->ICU4 -------->TOE1(3)     ------->TEIL  ----------->GT1                 <---------ARR14(2)  <---------At4g35610 -------TOE1(3)    ----------->GT1<-----------RAV1(2)            ----------->GT1------>MYB83 <-------   aagcttagatgaattcttgtaatgtatatctaatgatcaggttattaggaataaaagagtaagagaagggtatattgttaccgacttggctgatgatgat  1886800                       --------->ANAC58                       --------->ANAC46      --------->ARR11(3)      <---------ARR11(3)  --------->LBD16 --------->ARR14(2)                     <----------DOF2 ===================bZIP_DOF                         <----------DOF2                               -- ->ICU4  <---------DAG2--------->ANAC58        --------->MYB46(3)                          <---------ARR14(2) ----GLK1(2)      <---------ARR14(2)      --------->TOE2(3)                  <----------DOF2    *TSS --YAB1  <----------DOF2                  --------->TOE1(3)   <-----------GT1<---------DAG2--------->ARR14(2)   tctccgaagaactttttccgaattcacgccaagaagagacttaacattaacaactctttctttttctctctctgtctctctttttgaaatgcctatacgt  1886900                                                                                   --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                              <---------MYB52(1)                                                                            <---------MYB46(3)                                                                        <---------ANAC55(2)                                                                       <-------TEIL<---------AHL20(2)                                <---------At4g35610               --------->AHL20(2)                                --------->At4g35610               <---------AHL20(2)              <--                     ---------->DOF2           <----------DOF2    <---------AHL20(1)             <---         ----------->GT1   --------->ALFIN1    <---------DAG2     --------->AHL20(1)           ------ ---------->CBF   --------->AHL20(2)        <-----------GT1    --------->YAB1<-------GAMYB    -------   ttgcaatttgagagtaacaaataaaaagagtggaagatgacacatttaactttttttttttgtattaataaaatacgtctgttatttatttgtggtctaa  1887000                                                 <---------AHL20(2)                              ----                                               <---------AHL20(2)                           ---------                                              <---------AHL20(2)                            <--------                                              --------->ARR11(3)                            ---------                                              <---------AHL20(1)                          --------->SPL7                                              --------->AHL20(1)                        <---------SPL7            <---------AHL20(2)      ---------->ID1                                     <---------ANAC58      ---------->DOF2              <-----------GT1                                    --------------- -------LBD16            ------->GAMYB        --------->AHL20(2)   --------->ANAC58   <-------------- ------ANAC46           <---------MYB52(2)    <---------ARR11(3)   --------->ANAC58   --------------- --->MYB52(1)        --------->MYB46(3)<----------DOF2<---------AHL20(2)         -------------------- ---->HVH21 --------->AHL20(2)  <---------AHL20(2)   <---------AHL20(2)  <---------ZAT6<---------ANAC58   cggggaacaaaagtttaatttcaacaactaacatttttttcctttcaatatattttttattttctcaaaacgctagtgtttttttttgttcgtaccgtaa  1887100     --------->DAG2                                                                  <---------AHL20(2) ----->ICU4                                                                        <---------RVE1(1) >ANAC55(2)                                                               <---------TOE2(3) -ANAC55(2)                                                               <---------TOE1(3) -->GT1                                                  <---------ZAT14 ---------->DOF2 >AtSPL8                                  --------->AHL20(2)         <---------MYB46(3) -AtSPL3                                  <---------AHL20(2)  <---------ZAT14     <---------GLK1(2) >AtSPL3         <---------TOE2(3)  --------->YAB1       --------->ZAT14 <---------DOF5.7(2)    ----- ->WRI1         ---------->DOF2<---------YAB1     <---------SPL7  <----------DOF2 --------->ARR11(3)   tattcaaaaattgaaaactaaagttttttttttatcaataacaattaatggtggtactctggactggactttggttaaagttcagattttttttatgtgt  1887200                                               --------->ATHB12                                             --------------->AGL15                                             <---------MYB59                                             <---------DAG2                                             --------->TOE1(3)                                             --------->TOE2(3)                                            ----------------->AGL1         <----------DOF2                    ----------------->AG       ------>MYB46(1)                     <-----------------AGL1    --------->AHL20(2)       ------>MYB83                        <-----------------AG--------->YAB1<---------MYB59     <---------MYB59                   <------MYB83            ----------->GT1     <-----------GT1<--     <---------MYB111(1)               <------MYB46(1) ---------->DOF2<---------AHL20(2)       ------ ------>HVH21  <-------TEIL  ----------->GT1<---------------AGL15    <---------AHL20(2)        <-----   gacaatacctactttgatacatcttactgaattgaaatatttggttaccttattggtaaaagaaatagtaattttatgacctaagttacaaatttgagtt  1887300                                                                              --------->YAB1                                                                             <------ZmHOX2a(2)                              <---------AHL20(2)      <---------HSFB2a(2) <------MYB83                            <---------RVE1(1)         --------->HSFB2a(2) <------MYB46(1)                           --------->ARR11(3)     ==================================HOX2a_HOX2a    <----------DOF2        <---------GLK1(2)<-------TEIL                <--------P --------DOF2              <---------ARR11(3)     ------>ZmHOX2a(1)    <-------GAMYB                - --->ARR11(3)      <----------DOF2         <-----------GT1            <---------MYB46(3)            - ----ARR11(3)   ------->TEIL<---------CCA1(1)     <----------DOF2    <---------AtMYB61       --------   ctttttctttataagttgcatcttttagagatttttttttttaagttacatcctttttagaaacgagggttttggttggatcatgaaatttttgtttgtg  1887400  Previous    Next  AGI:  At1g06170.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G31220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65796.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 1884990    to: 1886896    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version