Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ANAC58                                                 ------>NtERF2                                                 ----------->RAV1(1)        --------->ZAT6                          --------->ANAC46     --------->REM1(1)                          ----------->HVH21   <-----------HVH21                            <---------ETT(1)  --------->ANAC46                  --------->AHL20(2) <---------ARR11(3) --->MYB83                       --------->TOE2(3)   --------->ANAC58 --->MYB46(1)           <----------DOF2         --------->LBD16             <---------ATHB12      <-- ---->AtMYB61           <---------DAG2         --------->LBD16         --------->TOE2(3)        -----   ttccccttcaccactaaaaaacacccctttttaaaacttaaaatagtcccccgacaagaactctcccttgaattcttaatcagtctctgtgtctgaaaat  1873300                                                             -------->P                                                           --------->MYB46(3)                                                           <---------MYB111(1)                                                           <---------MYB46(2)                                                  --------->ARR14(2)                                                  <---------ARR14(2)            --------->TOE2(3)   <---------ANAC58  ------->TEIL                                 ------          ------>NtERF2   <---------DAG2          --------->GLK1(2)                 -----------------    <---------ANAC58      <----------DOF2  --------->At4g35610                     <---------ZAT2  --    <---------ANAC58 <---------GLK1(1)<---------At4g35610  <------------MYB.PH3(2) --------->ZAT2  -- ---------GT1        --------->GLK1(1)--------->At4g35610  <---------MYB111(2) -------->P      ------ ---->AHL20(2) ---------->DOF2  <---------ANAC58  <---------ARR11(1)     ------->TEIL   ---------->ID1   aaacagtcttgccacctaaaaggaaaccctttttgcctacagatgagctacgaatctactaactacctctgtatgaacctctaccagcttgttcccttcg  1873400        <---------LBD16    <---------ZAT2    --------->At4g35610    --------->ZAT2    <---------At4g35610    <---------ALFIN1 --->ANAC58             --------------->AtSPL3                 <----------DOF2         --------->STY1(2) ---->WRI1             <------NtERF2                          <---------ANAC58         <---------ZAT2 ------->ANAC58--------->ATHB12                       <---------ZAT18           -------->P     >>>>>> ------->ANAC58<---------AHL20(2)                     --------->ZAT18   --------->YAB1 --------->ZAT2 --->ANAC58  <----------DOF2              <---------ARR14(2)  <---------ANAC58--------->MYB46(3)  >>>   caatccagctctcggatttattggtggccctacttctcccagtgaatactgcctagtgcccattcctttcccaaacataaacaacccctagctcgaagaa  1873500                                                                                          --------->ARR14(2)                                                                                  --------->ANAC58                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                               --------->ARR11(1)                                                                             ----------->ARR10                                                                           <---------At4g35610  -----                                                                     --------->HSFB2a(2)  <---------ARR14(2)                ------------------------>ANAC81                      <---------HSFB2a(2)  ------->TEIL --------->ARR11(3)>>>>>>>>>TBF1                                 ------>ZmHOX2a(1)--------->ANAC58 >>>TBF1  <------ZmHOX2a(2)                                      <----------DOF2--------->ARR14(1) >>>>>>TBF1     >>>>>>>>>TBF1                                  ------>ZmHOX2a(2)--------->CCA1(2)   gaagaaattgagatcgaagaagaagaaaacagaaacagagtctagcttatttcatgagacattgatcctttctcgagagatgatacgctctgaatctgca  1873600                                                      ---------->DOF2                                          <---------GLK1(1)            --------->RVE1(1)             --------->GLK1(1)           <---------ARR11(3)         --------->HSFB2a(2)    --------->At4g35610           --------->GLK1(2)    <----------DOF2     ----------->HVH21     ------->GAMYB          <---------GLK1(2)     --------->LBD16 --------->MYB46(3) ---------->DOF2   <---------HSFB2a(2)    --------->CCA1(2)         --------->ANAC55(2) -->TEIL   --------->ARR11(3)--------->GLK1(2) --------->MYB52(1)     <----------DOF2  <---------ANAC55(2)   tctacaaccgaaaaatctctctcaaagttagaatctttgtcgagaaatccaccggtgaaagagagatgaacactttgagtaagaacaacaagtgactaga  1873700                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------DEAR3(1)                                                   <---------ANAC46                                                  <------NtERF2                                   ---                                                <---------RAP2.3(3)                           <------                                                <---------DEAR3(1)                     ----------->GT1                                              --------->ALFIN1                         <---------MYB46(3)           --------->ANAC58            <-----------TBP                                --------->ALFIN1           --------->ANAC58          <----------DOF2<-------GAMYB                   ------->GAMYB<---    ---------->DOF2      ---------->DOF2  ---------->DOF2                        --------->MYB52(1)   gagagagaaagaaacgcagagttgctaaaaagacatctcctttttaaaggggggcgttgaagaaaattcagggctcattttagcaacggtggtaatatta  1873800                       <---------ZAT18                    <------MYB83                    <------MYB46(1)                               --------->ALFIN1                --------->STY1(2)                               --------->ALFIN1                <---------STY1(2)                               <---------ANAC46               ------>NtERF2                                   --------->MYB55(2)          --------->ZAT14                                     <---------ANAC46          <---------ZAT14                                   <---------ANAC46          --------->SPL7                                   --------->ALFIN1          --------->ZAT18                                <---------ANAC46       <---------ANAC58<-------TEIL     <---------STY1(1)<---------ZAT6    <---------TOE2(3)       <---------ANAC58--------->ZAT18  --------->STY1(1)<-----------RAV1(1)              <---------ICU4 ------>YAB1--------->At4g35610       ------->GAMYB      --------->ALFIN1  <---------TOE1(3)   ------ ---YAB1  <---------ZAT18  <----------DOF2    <---------STY1(1)<---------DEAR3(1)         --------->YAB1 ------YAB1 <---------At4g35610     -------->P--------->STY1(1)<---------MYB46(3)      --------->YAB1   tcagagctatcgtgcgctggctaggtgcgcattttagcaaccctaggcctagggtagtagtgtggggggtggattttaaggcatgggattaataatgtgg  1873900                                             <-----------GT1                        <---------DAG2                                         -------->HAHB4                          <-----------GT1                                  --------->At4g35610                     <----------DOF2                                  <------NtERF2                           <---------DAG2                    ------>ZmHOX2a(2)    --------->ATHB12             <---------ZAT18                  --------->ARR11(3)    <---------YAB1                --------->ZAT14                  <---------ARR11(3)    --------->ICU4                --------->ZAT18    --------->TOE1(2)            --------->ANAC58                     <---------ZAT14        <------- ----->GT1    --------->CCA1(2)  --------->ANAC58 ----------->GT1 ------>ZmHOX2a(1) <----------DOF2   aaaaaacattcgagtgatatgatctctctaatggccagcaaaatgattcaccaagtgaaattttgttcctagtgcactttattttacttttcttcatcat  1874000                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                     <---------ICU4                                                                                     -------->HAHB4                                                                                  --------->YAB1                                                                                  <---------ICU4            --------->ALFIN1                   <---------DAG2                    --------->ICU4          <---------ANAC46                     <----------DOF2                   <---------YAB1   <-----------GT1                   --------->AtLEC2 <----------DOF2          --------->YAB1 --YAB1--------->ANAC46   --------->ICU4    <-----------GT1      <---------MYB46(3) --------->ICU4   acaaattacacgatgtgtagtacttgtaattctttcgccatacaaataacttttttctttgaaatggtgtttgatagaacataataataatgcgtctata  1874100                                          <---------MYB52(1)                                     <---------CCA1(2)                         <---------ARR11(3) <---------MYB46(3)                         --------->ARR11(3)<---------TOE1(2)              <---------YAB1     <---------ANAC46          <---------AHL20(2)        <---------ARR14(2)           =======================HOX2a_HOX2a       --------->ANAC58                 --------->ARR14(2)           ------>ZmHOX2a(1)     <---------ANAC55(1)--------->ANAC58                <------ZmHOX2a(1)          --------->TOE2(3)   <---------MYB52(1)    --------->ANAC46         ---------->DOF2         ------>ZmHOX2a(2) ------>ZmHOX2a(2)--------->MYB52(2)        <-----------RAV1(1)        ----   tgttgatgtgatccttatttttgatatgatctgttatgtgtatcgtttgttctccagccattttttttttttttgtgggcaaagaaggatttggaatgtg  1874200  Previous    Next  AGI:  At1g06150.1    Description:  transcription factor. similar to CPuORF7 (Conserved peptide upstream open reading frame 7) [Arabidopsis thaliana] (TAIR:AT2G31280.3); similar to CPuORF7 (Conserved peptide upstream open reading frame 7) [Arabidopsis thaliana] (TAIR:AT2G31280.2); similar to CPuORF7 (Conserved peptide upstream open reading frame 7), transcription factor [Arabidopsis thaliana] (TAIR:AT2G31280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70692.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 1868986    to: 1873717    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g06149.1    Description:  CPuORF8 (Conserved peptide upstream open reading frame 8). similar to CPuORF7 (Conserved peptide upstream open reading frame 7) [Arabidopsis thaliana] (TAIR:AT2G31280.4) Range:  from: 1868988    to: 1873717    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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