Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                    <---------TOE2(3)                          <-----                                                <----------DOF2                              <-------                                          <---------ICU4                --------->TOE2(3)  ----------                                          --------->YAB1              --------->ARR11(3)   <---------ZAT2                                          --------->ATHB12            <---------ARR11(3)   --------->ZAT2            ----------->RAV1(1)           <--------HAHB4             --------->YAB1        --------->At4g35610      <-----------GT1                    <---------ATHB12         <---------ICU4           <---------At4g35610 -------->YAB1                         --------->WOX13(1)         --------->YAB1 <---------MYB46(3) --->AHL20(2)                         --------->MYB46(3)      --------->ZAT6  <---------MYB46(3) <--- --DOF2    --------->MYB46(3)       --------->MYB52(1)<------ZmHOX2a(1)<---------YAB1    <-----------RAV1(2)   aatcatattaacaacaacagtttgaatatagacatagctaacaatcatttcttttaggaattgatcactaattatcttagttgttgttgattcagctggt  1855500       <---------YAB1    <-------TEIL                                                               ---------->DOF2 ------>ANAC55(2)                                                       --------->AHL20(2) -------ANAC58                                                          <---------AHL20(1) -------ANAC55(2)                  <---------ANAC58           --------->HSFB2a(2) -------ANAC46                     <---------ANAC46           <---------HSFB2a(2) -------ANAC58                     --------->ALFIN1      <---------MYB46(3) --------->AHL20(2) ----MYB52(1)                      <---------ANAC58     --------->ALFIN1<---------AHL20(2) --------AtSPL3                  <------MYB46(1)       <-------MYC3     --------->AHL20(1) ->RAV1(2)                       <------MYB83--------->MYB52(1)   ------------------------>ANAC81 ----TEIL        --------->YAB1 <---------AtMYB61      ------->MYC3    <---------ATHB12   acgtgattcattcttgataacataatacgaggggatggtgtggaaaacaactgtacatgtggttccaaaaccaataaaataaaaaggaatatgaagaaga  1855600                                                                        <-----------GT1                                          ---------->DOF2           --------->AHL20(2)                                       --------->ANAC58             <---------AHL20(1)                                   --------->ANAC58                 --------->AHL20(1)                                   --------->ANAC58                 <---------AHL20(2)                                   --------->ANAC46              <--------ATHB1                            --------->ARR14(2)                   --------->ATHB51                            <---------ARR14(2)                   --------->AHL20(2)                    --------->CCA1(2)--------->MYB52(1)          <---------ICU4                  --------->YAB1 --------->ANAC46     ----------->GT1<---------AHL20(2)           --------->MYB52(1)  <---------ALFIN1    --------->DAG2<---------AHL20(2)        --------->YAB1    --------->MYB55(2)     ---------->DOF2--------->ICU4                     --        <---------ICU4    <---------MYB46(3)----------->GT1   --------->YAB1                      <--       <---------YAB1 <---------AtMYB61--------->ANAC58     <---------YAB1     --------->ANAC46   ---   gaacatttgataataacgaatgatatggtggttccacacgaacggaaagtcaaaaggggtttattaataatttatttcaacacgagaataagtgaatgtg  1855700                                                <---------TOE1(2)                                              --------->TOE2(2)                                              --------->TOE1(2)                                        <---------AHL20(2)                                        --------->AHL20(2)                                       --------->AHL20(2)                                       --------->YAB1        ----------->GT1                <---------AHL20(2)                   <---------ZAT18    <---------YAB1                  <---------ICU4                    <---------ANAC46    --------->ICU4                 --------->AHL20(2)            --------->At4g35610  --------->YAB1                   <---------ATHB51          --------->ARR11(3) --------->ICU4                    <---------AHL20(2)        <---------ARR11(3) <---------YAB1    --------->YAB1  --------->ICU4     <---------ICU4  <---------ANAC58 ------->YAB1   --------->YAB1    --------->AHL20(2)  --------->YAB1  <---------ANAC58 -------YAB1    --------->TOE2(3) <---------AHL20(1) --------->ICU4----------->HVH21             ---- ------>ICU4  <---------TOE2(3)  --------->YAB1------>ZmHOX2a(1)--------->GLK1(2)       <---------GLK1(2)   atgatgatgatggtataacgataatcaaatgcccaaaataattaaaatcctacgaataatgaagagcttctgacttggtacacatactcaaattctctta  1855800                            --------->DAG2                       --------->ANAC58                       --------->ANAC58                      --------->DAG2                  --------->AHL20(2)                  <---------AHL20(2)                 --------->AHL20(2)              --------->AHL20(2)              <---------AHL20(2)             <---------AHL20(2)    ------>NtERF2             --------->AHL20(2)   --------->WRKY38(1)            <---------AHL20(1)    --------->WRKY12            --------->AHL20(2)    ----------->HVH21                                                 <           --------->YAB1  ---------->DOF2 ----------->RAV1(2)                                    ---      >>>>>>>>>MYB2  ---------->DOF2    <---------ALFIN1               <-----------TBP  ------>ZmHOX2a(1) ------->GAMYB--------->AHL20(1)--------->At4g35610        --------->WOX13(1)           <----------DOF2 ----->MYB46(3)  <---------AHL20(2)<---------ATERF1(1)   ------------>CBF  <---------AHL20(2)   -----   caaccgaaaaccaaaataatttaaaaagcaaaagcgctgactccaccctggctctctaaaccaattacatcccatatataatcaaacgtcctttggtgat  1855900                                             ----------->HVH21                                    --------->ANAC58          <-----------GT1         --------->MYB52(1)     ----------->TBP            <---------MYB52(2)                          <------ZmHOX2a(1)     --------->AHL20(2)    --------->YAB1  <---------ANAC58    <----------ID1 --------->YAB1    <---------ARR11(3)      <---------ANAC58  <---------------AtSPL8              ---- ---------ATHB12   --------->ARR11(3)     *TSS  --------->ETT(2)         <---------ICU4       ------- ------>WOX13(1)  <---------CCA1(2) --------->ANAC58   ----------------->AGL1                 ------- ------->CBF    --------->YAB1  --------->MYB46(3)  <---------DEAR3(2)--------->YAB1        ---------   caatcatatatataactctcatatctcaaaaataacaaacgcattccttgacgacggtccaatgggggacaaaaataaggacgatagctctagccaaagc  1856000                                   <------ZmHOX2a(1)                            <----------DOF2                           --------------->AGL15                           <---------------AGL15                          ----------------->AGL1                          <-----------------AGL1                      <---------HSFB2a(1)   <---------LBD16                    <---------DEAR3(1)                      --------->HSFB2a(1) ------->TEIL                   <---------MYB52(1)                ---------->DOF2   --------->LBD16                       <-------GAMYB------->TEIL           ----------->GT1----------------->AGL2                       <----------DOF2      <---------ANAC58<---------ANAC58    <---------ARR14(2)           <---------MYB46(3)      <---------ANAC55(2) <-----------------AGL3                       <-----------RAV1(1)      <---------ANAC58<---------ANAC58    --------->TCP16(1)           --------->MYB55(2) ------>DOF2<------ZmHOX2a(1)   <---------LBD16     <---------TOE2(3)<---------At4g35610 -->ANAC58--------->ANAC58<-----------------AGL2 <--------P--------->YAB1--------->ALFIN1 -->ANAC58--------->ANAC58----------------->AG--------->LBD16      <---------RAP2.6(2)       <------- ->DOF2  --------->SPL7   ===========================================================================   aaagcagtgcgtaaggaaaaaagagcgttccttttcaggaaatggacccgggttgatgtaatgagagtttcggctgttggggctgtgcatctattgtgtc  1856100                                      --------->At4g35610                                      <---------At4g35610                                  <---------MYB52(1)                            <----------DOF2                          <---------HSFC1(2)      <---------DEAR3(2)                          --------->HSFB2a(1)     <------MYB83                   ------->MYC3  --------->LBD16  ----------->GT1              <---------------AGL15  --------->MYB52(2)             <-----------------AGL3<---------MYB52(1)      <---------ANAC46    <---------HSFB2a(1)     <------MYB46(1)     <------NtERF2 <-------MYC3<---------LBD16   <---------MYB46(3) --ANAC46  <-----------GT1--------->HSFC1(2)    <---------ORA47(1)                          --------- =============================MADS_MADS      <---------AtMYB61        <---------ICU4       <------ZmHOX2a(1)   tattggctccgtttaactacacatgggaagctttccggtttgctgctatggtcggtatatcgactaatctcagcattacattttcataccataggaactt  1856200                                                                              <---------AHL20(1)                                   --------->ARR14(2)                         --------->AHL20(1)                            <---------ANAC58                                  --------->ARR11(3)                     ------>ZmHOX2a(1)                                      --------->AHL20(1)                    --------->TOE2(3)                                ----------->GT1               <---------At4g35610 <---------ARR11(3)              <-----------RAV1(2)               --------->At4g35610 <-----------GT1               <----------DOF2              <---------TOE1(3)    <---------ARR14(2)   <---------DAG2      <---------AHL20(1)    --------->DEAR3(1)      <---------ANAC58            <----------DOF2    --------->AHL20(2)       - >ARR11(3)<----------DOF2   <---------ANAC46        ------>NtERF2<-----------HVH21      <-----------GT1   gactcaccgaagctttaagcttcctaaatggcttgaatatccattcgcttactctgcccttttcgcgcttcaggtaaatatatattgttttcaccgaaaa  1856300                            <---------YAB1                           <---------ARR11(3)                           --------->ARR11(3)                             <---------ZAT14                     ------>ZmHOX2a(1)                                    --------->ZAT14                    --------->TOE2(3)                                     <---------ZAT18                 ------->TEIL <----------DOF2                      <---------ANAC58                 <---------ARR14(2)                <-----------HVH21      --------->ZAT18                 --------->ARR14(2)             --------->LBD16    <---------ANAC46              --------->ANAC55(2)               <---------TOE1(2)  <---------ANAC58             -----        --------->MYB46(3)--------->YAB1       <---------LBD16    <---------MYB46(3)            <---- -------->ZAT6<---------ANAC55(2)     <---------AHL20(2)      --------->ATHB12  <---------TOE2(2)   taccactataaccaatatgtatcctcaattatctttgtatttttttctcccagggtcatccaatagattgggtgagtacacataggttccatcaccagtt  1856400  Previous    Next  AGI:  At1g06120.1    Description:  fatty acid desaturase family protein. Identical to Delta-9 desaturase-like 3 protein [Arabidopsis Thaliana] (GB:Q9FPD5;GB:Q9LND6); similar to fatty acid desaturase family protein [Arabidopsis thaliana] (TAIR:AT1G06090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62719.1); contains InterPro domain Fatty acid desaturase, type 1, core (InterPro:IPR015876); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, C-terminal; (InterPro:IPR001522); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257) Range:  from: 1855942    to: 1857717    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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