Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->MYB46(3)            <---------TOE1(3)<---------TOE2(3)                   --------->GLK1(2) -----------RAV1(2)<---------ATHB12                             --------->ARR14(2) --------DOF2   <---------WRKY38(1)                             <---------ARR14(2) ------ANAC58   <---------WRKY12          ---------->DOF2       <---------GLK1(2) ------ANAC58  --------->WRKY18(1)     ----------->RAV1(1)<-----------GT1        <---------YAB1 ---DOF2    <---------TOE2(3)<---------TOE1(3)        <----------DOF2      <-------TEIL     ---------   cttcagggaagtttaaggtcaaccattgtttgaggttgtcccaacaaagtctaactcttttaaccagattccaaggatacattctaaatgactccctcca  1854600                                           <---------TOE2(3)                                           <---------TOE1(3)                                       <----------DOF2                                  <----------DOF2                               <---------ARR11(3)                                     --------->YAB1                               --------->ARR11(3)                                    <---------ATHB12                               --------->GLK1(2)                                     <<<<<<<<<ARR2 >ANAC46      --------->At4g35610<---------ICU4                                    --------->WOX13(1)   caattgatatgctctctgatgaattaagagaaaaatctttactttaaggtagtctcaaattcaggtcaaattctaaggcgctaaacaatcaaaaccctag  1854700                                                              ------>ZmHOX2a(2)                                                            <---------ARR14(2)                                                  =========================HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 ==========================HOX2a_HOX2a                                                 <---------GLK1(1)                                                 --------->GLK1(1)                                                --------->ARR14(2)                                                <---------ARR14(2)                                                --------->ARR11(3)                                                --------->ARR14(3)                           <-------                                                <---------ARR11(3)                   <---------YAB1                                                <---------ARR14(3)           <---------RVE1(1)                                                <-----------ARR10           <---------ARR11(3)                                               ======================HOX2a_HOX2a    <---------ARR11(3)                                               <------ZmHOX2a(1)            --------->ARR11(3)                                               <---------GLK1(2)          <---------ZAT6     --------                                           --------->At4g35610=============HOX2a_HOX2a--------->ATHB12                                         ================HOX2a_HOX2a========================HOX2a_HOX2a              ---------->DOF2            ============================HOX2a_HOX2a    --------->ARR11(3)      ---------->DOF2                    <------ZmHOX2a(1)  --------->ARR14(2)    <---------YAB1 ----------->GT1  ----------->GT1        ===============HOX2a_HOX2a <------ZmHOX2a(1)<------ZmHOX2a(2)   aaaatgtgaaaagaagaaaagagtgaaattgaccttgaaggaaggagcaggatctccatggggatcgagaggagtagagatattaagatcattggagcag  1854800                              --------->ARR11(3)                             --------->GLK1(1)                           <------NtERF2                           --------->ATERF1(1)                          --------->LBD16                         <---------DEAR3(1)                         <---------ANAC46                        --------->ATERF1(1)                        <------NtERF2                       <---------ATERF1(1)<---------ARR14(2)                      <---------DEAR3(1)  <---------ZAT14                   --------->TOE1(1)     --------->DOF5.7(2)                  <---------HSFB2a(2)   ----------------------->TaNAC69(2)                  ------>ZmHOX2a(1)    <---------ANAC58              --------->GLK1(2)        <---------ANAC46        <---------LBD16   <---------ARR14(2)              <---------ARR14(2)       <---------ANAC58   <---------ALFIN1       --------->ARR14(2) --------->CCA1(2)<---------LBD16  ---------->DOF2   --------->ANAC58         <-----------------AG -- --At4g35610  --------->ARR14(2)--------->TOE1(3)    --------->ANAC58         ----------------->AGL1 ->At4g35610 <---------GLK1(2)<---------ARR11(3)     --------->ANAC46         <-----------------AGL2   aagatagaccagagagattcctcggaggcggagaccttaaggcgtttactgacacaagccactctcgcggtgttttcagggccgattttggataagacga  1854900                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                       <----------DOF2                                                                                      <---------ANAC46                         <---------HSFB2a(2)                                          <---------ANAC58          <---------ARR14(2)        <---------ANAC58             <---------ZAT18   <--------P--------          --------->ARR14(2)        <---------ANAC58     -------->P                <---------MYB52(1)         ------>MYB46(1) --------->HSFB2a(2)           --------->MYB46(3)         <-------GAMYB<-----         ------>MYB83  ------>ZmHOX2a(1)  ---------->ID1------->GAMYB<----------DOF2  <---------ANAC58         <---------CCA1(2)       <---------CCA1(2)     <---------MYB55(2)<----------DOF2  <---------- ------->ALFIN1    --------->ARR14(2)<----------DOF2   <---------MYB111(2)       <---------MYB46(3)   tgtggagaaccaaatctccagcatcctctagacccatagctttcgtcgtctcagacaacaacccttgttcgctttctttctctcggttgcttttgtcggc  1855000                                                                    --------->ALFIN1                                                                   -------->ABF1                                                                   ------->PIF5                                                                   ------->MYC2                                                                   <-------MYC2                                                                   <-------MYC3                                                                   ------->MYC3        --------->ZAT14                                            <-------PIF5 ---DEAR3(2)                                                       ------->MYC4 ---RAP2.3(1)                                                      <-------MYC4 --RAP2.3(2)                                                      --------->ANAC46 --RAP2.6(2)                                                      --------->TGA1a --RAP2.3(3)                                <----------ID1        --------->O2 --DEAR3(1)                             ---------->DOF2           --------->ANAC55(2) --DREB2C(2)                            ====================================bZIP_DOF >RAP2.6(3)                    --------->YAB1                     <---------TGA1a ->ETT(1)                     <---------ATHB12  ============================bZIP_DOF -NtERF2<---------ZAT14     --------->WOX13(1)  ---------->DOF2   <---------O2          ----------->GT1 -RAV1(1)      <----------DOF2*TSS <---------ARR11(3)     <---------YAB1          <---------At5g28300   tctgtttcagttcagttctttggattgtttcaatcaagaactgaaagaaacaaagcatttttgattacacgtggcacttgatattacagtgagttaatac  1855100                                                          <---------ANAC46                                                     <---------ICU4                  ----------->RAV1(1)                                                    --------->ICU4                  --------->MYB46(3)                                                  --------->TOE2(3)                --------->SPL7                                                  --------->YAB1                  ------>MYB83                  <---------TOE2(3)         --------------->AtSPL8                ------>MYB46(1)                 ---------->DOF2            --------------->AtSPL3              <---------MYB59          <-------TEIL           <---------ZAT18--------->SPL7          ---------->DOF2         <----      <---------------AtSPL8 --------->ALFIN1 <---------SPL7<------NtERF2--------->DAG2    --------->AHL20(2)   aaaattcgagggtacacattaaagaagaaacttggggcacatagggaccgtaccataatggcgcaaaaaaaaaaaaaagggaccgaaccacaaaaaaatc  1855200                                                            --------->MYB46(3)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                   --------->ZAT14                 --------->DAG2               --------->At4g35610                       <----------DOF2                ---------->DOF2          --------->YAB1  <------ZmHOX2a(1) <---------AHL20(2) -----ICU4   --------->AtLEC2     <------ZmHOX2a(1)<---------ZAT14     <---------AHL20(2)   attttgagtatgaccatgaaaagttgataactgctaggagacatcatcatctgtacagaggaaccattcttgtttattttttttgctaagctttgaaatt  1855300                                      --------->At4g35610                                           -               --------->YAB1       --------->REM1(1)                                          ------              <---------YAB1      <----------DOF2                                           <--------            --------->YAB1      --------->At4g35610                                        ------>ZmHOX2a(2)           <---------YAB1       <---------At4g35610             ------>MYB83             <---------ARR11(3) ------>ZmHOX2a(1)       <---------ARR11(3)                     ------>MYB46(1)          --------->ARR11(3) <----------DOF2       --------->LBD16<---------At4g35610     <---------MYB59        --------->ANAC55(2)   gtcctttgctgttcttataataacccagagcttctgcttcatctgctcttcttatcgaatactacctatcccaagttgcatttgtttatgtgatctttta  1855400                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                    <---------TOE2(3)                          <-----                                                <----------DOF2                              <-------                                          <--------HAHB4                --------->TOE2(3)  --------->At4g35610                                          <---------ICU4              --------->ARR11(3)   --------->ZAT2                                          --------->YAB1              <---------ARR11(3)   <---------At4g35610            ----------->RAV1(1)           --------->ATHB12           --------->YAB1        ----------      <-----------GT1                    <---------ATHB12         --------->YAB1           <---------ZAT2 -------->YAB1                         --------->WOX13(1)         <---------ICU4 <---------MYB46(3) --->AHL20(2)                         --------->MYB46(3)      --------->ZAT6  <---------MYB46(3) <--- --DOF2    --------->MYB46(3)       --------->MYB52(1)<------ZmHOX2a(1)<---------YAB1    <-----------RAV1(2)   aatcatattaacaacaacagtttgaatatagacatagctaacaatcatttcttttaggaattgatcactaattatcttagttgttgttgattcagctggt  1855500  Previous    Next  AGI:  At1g06110.1    Description:  SKIP16 (SKP1/ASK-INTERACTING PROTEIN 16); protein binding. similar to Os11g0265200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067658.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAX96082.1); contains InterPro domain ApaG (InterPro:IPR007474) Range:  from: 1853076    to: 1855030    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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