Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ZAT6   <---------YAB1 --------->YAB1 <---------ICU4 ---------YAB1 ------>YAB1         <-------TEIL             --------->REM1(1)                                     < -------ICU4    <---------AHL20(2)     <---------AHL20(2)                                         --- ------ATHB12  --------->AHL20(2)     --------->AHL20(2)<----------DOF2                      -------- --GT1         --------->YAB1   ----------->GT1     <----------DOF2                          <-------   tcatcatcactaactaataaaaatgcattaaaaactgaaaataaatctacatctctttctttgaaacagttttttttttgtttctaatacttggattaat  1851100          --------->CCA1(2)         --------->ARR14(2)                              <---------------AtSPL8         <---------ARR11(3)                              --------------->AtSPL8         <---------ARR14(2)                        --------->AHL20(1)         --------->ARR11(3)                        <---------AHL20(1)       ----------->ARR10                           --------->AHL20(2)            <-----------GT1   --------->DAG2                                  --------->ARR11(3)           --------->AHL20(1)  ---------->DOF2                                  <---------AHL20(2)        --------->AHL20(2) ------ZmHOX2a(1)                        <---------WOX13(1)  ------->TEIL--------->AHL20(2) ------>MYB59                   --------->AHL20(2) <---------ARR11(3)   --------->AHL20(2) ->AHL20(2)                     <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)             <- --AHL20(2)        --------->YAB1     <---------YAB1<---------AHL20(2)--------->TOE2(3)     ---------   taggaaaaggagatatgttattcatattctaaatttaaatatgaatgactaaatatatttatgtactcaattcattaaaaaatatactatatgcaaaaga  1851200                                                                                     <---------YAB1                                                                           --------->MYB52(1)       --------->TOE2(3)                                                   ------>MYB83    <---------AHL20(1)                              --------------->AGL15  ------>MYB46(1)       ----    <---------ARR11(3)                              <---------------AGL15<---------MYB46(2)      <---    --------->ARR11(3)                            <-----------TBP        <---------MYB59         <--- --------ATHB12      <---------AHL20(2)        <---------DAG2            <---------MYB111(1)     ==== ->DOF2<----------DOF2       ----------->GT1   <----------DOF2  ------------>CBF    <-----------GT1   aatcaatatctttaatgtgctatataaaaacatgtgaaatatagcaacgcttttttatatttagaaaacaatcgacctaactaaattttcattttggaga  1851300                                                          <---------ICU4                                                         <---------YAB1                                                         --------->ICU4                                                       --------->YAB1                        --------->ZAT18               --------->ICU4                        <---------ZAT18               <---------ZAT6                        <---------ZAT14          <------MYB46(1)                        --------->ZAT14         --------->MYB111(1)                      <---------------AtSPL8    --------->MYB111(2)                      --------------->AtSPL8    --------->MYB46(2)        <---------------AtSPL8                  --------->MYB59 ------------>CBF   --------->DAG2             <---------MYB55(1) ----->O2          ---------->DOF2            <---------MYB52(1) ------TGA1a <---------TOE1(1)               <-----------HVH21      <-----------GT1 ------O2    <---------TOE2(1)     <---------YAB1<------MYB83  <---------YAB1 =============================bZIP_DOF      <----------DOF2 <---------YAB1     <---------At5g28300  -   cgaggcaatttaagtacgagataaagtgtacaagtttattatttcgctgttaggtagtgatgattattttttactcaaattcaccgatacaactcttact  1851400                                  <---------------AGL15                                 ----------------->AGL1                --------->ARR11(3)                            <----------DOF2                            <---------ARR11(3)           -                        -------->P--------------->AGL15               --------->CCA1(1)             <                        ------>MYB83     --------->ANAC46  <---------ICU4                         <--                        ------>MYB46(1)  --------->ANAC58  --------->YAB1                      ------              ------------>CBF   ----------------->AG   --------->WOX13(1)            --------->CCA1(1)   ----------->RAV1(1)------->GAMYB  ----------->TBP  --------->WRKY18(1)--------->ZAT6<---------ARR11(3) --------->LBD16     --------->MYB46(3)  --------->ANAC58 <---------ATHB12            --------->RVE1(1) -------->ANAC46--------->YAB1 ---------->ID1         ------------>CBF--------->RVE1(1)--------->ARR11(3)   ctccccaacattcaactacaataaccaactcttttccctatataagcaaacctttggtcaatcataactcaaatatctctactacataatatctcaaaaa  1851500                        --------->At4g35610                       <---------TOE2(1)                                       <------ZmHOX2a(1)                       <---------TOE1(1)                                      ----------->GT1                    --------->ARR14(2)                                       --------->ANAC58           --------->TOE1(3)                                                 --------->ANAC58        <---------ALFIN1<---------At4g35610                                 --------->SPL7          <        <---------CCA1(2)                                                <---------ANAC58   <-------- -------->MYB46(3)  <---------ARR14(2)                                   <---------ANAC55(2)<-------- ---------MYB52(2)  <-----------HVH21      <------ZmHOX2a(1)             <---------ANAC58<---------ANAC58 ---------GT1----------->HVH21           <---------TOE2(3)          <---------ICU4       <---------ANAC58 --->YAB1  --------->TOE2(3)       --------->ZAT18             --------->AHL20(2)  ---------->DOF2  <   taacaaacccataccttgacagggtccgatgagtgagaccactaaggacgatggctctagccaaaaaaaatcagtgcgtaaggaaaaaagagcgtatgtt  1851600                                                       <-----------RAV1(1)                          -                                                     <---------At4g35610                    ---------                                                  <-------TEIL                   <---------------AGL15                                            --------->ARR14(2)                   --------------->AGL15  <------ZmHOX2a(1)                    <-------GAMYB------->TEIL                <-----------------AGL3 ---------TOE1(3)                     <-----------RAV1(1)   <---------ANAC46    <-----------------AGL2 -TOE1(2)--------->TCP16(1)           <---------MYB46(3) <---------MYB52(1)     ----------------->AGL2 -TOE2(2)------->TEIL        --------->ARR11(3)<---------ANAC58               <-----------GT1     <-- ---------TOE2(3)            <---------ARR11(3)<---------ANAC58           <----------DOF2   ---------   ttaaggaaatggacccagttcgatgttgggagagcttcgactgttggaaccgtgcatctgttgtgtctattggctccttttaactacaaatgggaagcat  1851700     <------MYB46(1)     <------MYB83     <---------ANAC46     ----------->GT1    --------->MYB59  <---------MYB52(1)                                                                 -------->P  --------->ARR14(2)                                       --------->ARR11(3)     <---------At4g35610  <---------ARR14(2)                                      <------ZmHOX2a(1)       --------->At4g35610 -------->LBD16 --------->ANAC58                   --------->SPL7            <----------DOF2   <----- >ANAC58        --------->ANAC46                 <---------SPL7         --------->LBD16        <----- -------LBD16   --------->ANAC58                --------->TOE1(1)     <---------LBD16--------->MYB52(1) >ANAC58 <---------YAB1                         --------->TOE2(1)    --------->MYB52(1)        <-----   tccggttcggtataattctcgccatactgacaaacctctgcattacattctcgtaccataggaacttgactcaccggagctttaagctaccgaaatggct  1851800  <---------ARR14(2)  --------->ARR14(2)                                      ------->GAMYB  <-----------GT1                              <---------MYB52(1)  <---------ARR11(3)              <-----------RAV1(2)  <-----------GT1          <---------AHL20(2) ----ANAC58            <----------DOF2       ----------->GT1             ------->TEIL  ------>ZmHOX2a(1) ----ANAC58          <----------DOF2----------->GT1 --------->YAB1 --------->ICU4<---------AHL20(2)-- ----ANAC46        <---------At4g35610       <---------ZAT6      ---------->DOF2--------->AHL20(2) <-   tgaatatccattcgcttattctgctcttttggcacttcaggtaaatactgttaattttaaccgaaaataaagatgaaactaattaaatcctccattccaa  1851900             <---------YAB1            --------->ARR11(3)            <---------ARR11(3)      ------>ZmHOX2a(1)     --------->TOE1(3)                                                    <---------At4g35610     --------->TOE2(3)                                                    --------->At4g35610     --------->ANAC46                                                <---------ANAC58  ------->TEIL <----------DOF2                   <---------LBD16     <---------ANAC46  <---------ARR14(2)                         <----------DOF2         <---------ANAC58  --------->ARR14(2)                    <----------DOF2    --------->ATHB12 ------->ANAC55(2)                 <----------DOF2        ------>ZmHOX2a(2)   <-------TEIL        --- --------ANAC55(2)            <----------DOF2<---------------AGL15  <---------MYB46(3)            <--   tatgtatcctcaactatctttgaattgtttctcttttcttttcttttcttttcagggtgatccattggattgggtgagcatacatagattccatcaccag  1852000  Previous    Next  AGI:  At1g06100.1    Description:  fatty acid desaturase family protein. Identical to Delta-9 desaturase-like 2 protein [Arabidopsis Thaliana] (GB:Q9LND8); similar to fatty acid desaturase family protein [Arabidopsis thaliana] (TAIR:AT1G06090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62719.1); contains InterPro domain Fatty acid desaturase, type 1, core (InterPro:IPR015876); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, C-terminal; (InterPro:IPR001522); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257) Range:  from: 1851529    to: 1853018    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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