Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <-------                                        <-----------TGA1                                   --------->YAB1                                        <-----------HVH21                                 --------->ZAT6                                       --------->ANAC46                       --------->AHL20(1)                                       --------->ANAC58          --------->YAB1     --------->ANAC58                                       --------->ANAC58      --------->AHL20(2)     --------->ANAC58                                 --------->At4g35610         <---------AHL20(2)   <-----------GT1 >GAMYB                   --------->ATHB12                  <---------WOX13(1)<---------AHL20(2) ---- --GT1      <---------AHL20(2)   <---------At4g35610      --------->ATHB12    --------->AHL20(2) <---   aaaatatgtcttatttaactgggataaatgtttggagctaaacgtcactaaaactgttcttgattaattgtaactgggaattaattacgctaacaataat  1818000   --------->ANAC58   --------->ANAC46   --------->ANAC58           --------->TOE2(3) ---ICU4                     ----------->GT1 --ATHB1                     <---------ZAT6 -->ATHB51                  <---------TOE2(3) -->AHL20(2)          <---------ARR14(2) ---AHL20(2)          --------->ARR14(2)                                    <-----------GT1 --ATHB12             <---------ZAT14                                   <---------ANAC46 ->ICU4            <---------ANAC58                            ---------->ID1         --------->AHL20(2) --ATHB51   <---------AHL20(2)--------->YAB1         --------->LBD16 <---------MYB52(1)<---------AHL20(2) ----->AHL20(2)    <---------ANAC58                 <---------LBD16 <-------GAMYB   --------->TOE2(3) ------AHL20(2)    <---------ANAC46        ----------->GT1   <-----------RAV1(1)  --------->ICU4    <   ttaaaacgaaacatatattttgcgtatactaatgttaattcaagaatgtaaattccagggtatttgtcgcagttgtttatactaaatattaattcgctca  1818100                  <-----------GT1               <---------YAB1                      <-------TEIL              --------->AHL20(1)                  --------->CCA1(2)             <---------ICU4                      <---------ARR14(2)       <---------AHL20(2)             <---------AHL20(2)             ---------->DOF2            <---------AHL20(1)             --------->AHL20(2)        <-----------------AGL3          --------->AHL20(1)             --------->ATHB51          --------->TOE2(3)       --------->YAB1            <---------YAB1             --------->TOE1(3)    --------->WOX13(1)       ----------->GT1               ------->TEIL--------->ARR14(2) --------->AHL20(2)         <----- -------TEIL--------->ICU4           -------->P <------ZmHOX2a(1) <---------GLK1(2)   --------->WRKY38(1)   gattcaagaatgtaattattttacaagaattttgttatctaccttcaaaaggatacacaaatctatcagattatatattatttgaatgttgactcaactt  1818200                                                                                                    <                                       <---------ANAC46                                             -                                       <------MYB46(1)      --------->AHL20(2)                      <                                       ----------->GT1      <---------AHL20(2)                   <---                                       <------MYB83    --------->ICU4                           <----                             <----------DOF2           --------->AHL20(2)                       <----                             <---------DAG2            <---------AHL20(2) <---------AHL20(2)    -----                          <-----------GT1       ---------->DOF2           --------->AHL20(2)---------                       <---------ICU4 --------->MYB46(2)   <---------AHL20(2)             <---------TOE2(3) -----DOF2       --------->TOE2(3)    <---------MYB46(3)   --------->AHL20(2)  <-----------GT1  -----   tccccctagtactactgtttcttaattcttacttttttgtttggtgaaaacaaagtattaattaaattcccactatatatataacaaattttaagaaaat  1818300                                                                                     <-----------ARR10                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(1)                                                                                     <---------ARR11(3)                                                                             --------->MYB52(1)                                                                             ---------->DOF2 ---------AHL20(2)                                                          --------->AtMYB61 -------->AHL20(2)                                                          ------->GAMYB          -- ---------AHL20(1)                                                         --------->MYB46(3)<------- ------ICU4                                                               -------->P --------->ARR14(2) -----ATHB51                                                             --------->WOX13(1) <-------- -----AHL20(2)                                                        <---------ARR11(3)<----------DOF2 ---->AHL20(2)                         --------->ANAC46          <---------TOE2(3)   <---------ARR14(2) >AHL20(2)                   ------>ZmHOX2a(1)                   ------------>CBF   --------->GLK1(1) ---->ICU4                   <----------DOF2                    <-----------GT1     <---------CCA1(2)   aattaattccataaactcatagagttgcatccttttaaaaccctcaacatgtccatctctaccgattaacaatatcaaccaaaggcatatctttttatct  1818400                          ------->TEIL                       <---------YAB1                          <---------ARR11(3)                 ---          <---------------AGL15                                <---------GLK1(2)                 <---          ------>ZmHOX2a(1)                                    --------->ARR11(3)              ------          --------------->AGL15               *TSS           <---------TOE1(2)             --------->ANAC58         ----------------->AGL3           <---------CCA1(2)  <---------TOE2(2)             --------->ANAC58 ---->ZmHOX2a(1)       <---------ATHB12  ------->TEIL       ------>ZmHOX2a(1)            ---------->DOF2 ----GT1 <-----------------AGL2    <-----------RAV1(1)   ------>ZmHOX2a(1)  ------>ZmHOX2a(1) <------ ---GT1  <-----------------AGL3  <----------DOF2  <-----------GT1      <---------GLK1(1)--------->ANAC46   ccttcttccttcctatttttggctaatgaatgtctctttgttgcatctcttgtaacttcctcctagatttttgaattcctgcccttatccaagaagccag  1818500                                                                     --------->REM1(1)                                                                --------->ZAT6             <---------                                                              ----------->RAV1(1)          ----------                                                           --------->ANAC55(2)           ------>ZmHOX2a(2)                         --------->ALFIN1                  <---------ANAC55(2)           --------->DEAR3(2)          <---------ARR11(3)   --------->RAP2.3(3)         --------->ANAC46            ------->TEIL          <---------GLK1(2) <---------PCF2               <---------ALFIN1              <---------ARR14(2)  ----------->GT1      <---------ANAC46                 <---------REM1(2)--------->TOE1(3)<---------ETT(1) ----------->GT1       --------->O2                    <---------ALFIN1  <----------DOF2<------ZmHOX2a(2) ------->DOF2          <---------O2                  ------>ZmHOX2a(1)   --------->TOE2(3)----------- ---ZmHOX2a(1)        <------NtERF2      --------->ARR11(3)--------->ANAC58            --------->ARR14(2) --->LBD16--------->ARR11(3)--------->TCP20 <----------DOF2--------->ANAC55(1)    --------->CCA1(2) -----RAV1(2)      ------>NtERF2         <---------ARR11(3)--------->ANAC58  ---------->DOF2   gaaagggtaaaagattttctcggcctcgtggagccctcaccattatcttttcttcctccacacgcaacactacaactttaaaagagatggatccgacaga  1818600                                                         --------->At4g35610      >>>>>>>>CAMTA3                                     <---------At4g35610      <---------ANAC46                          <---------LBD16      <---------ANAC58                          --------->LBD16                                 -----      --------->ANAC55(2)               --------->SPL7   --------->ZAT2                         -----      <---------ANAC58            ------>NtERF2<---------ANAC46                                ------      <---------ANAC55(2)        ----------->HVH21  ---------->DOF2                     <-----------GT1 --HVH21                  --------->ANAC58    <---------LBD16                         --------->GLK1(1) ->RAV1(1)            <---------HSFB2a(2)   <------ZmHOX2a(2)                   <---------STY1(1) --- >HVH21 --------->ALFIN1  --------->ANAC58 <-----------HVH21             --------->ANAC46     <------   gctaaaacgcgtgttccaaatgttcgacaagaacggggacgggacgatcacggggaaagagctgagcgagacactacgaagcctagggatttacatcccg  1818700                                --------->O2                                <---------O2                                <---------ANAC46  <---------ANAC58                                <---------TGA1a   <---------ANAC46                            <------ZmHOX2a(2)     <---------ANAC58       --------->WRKY38(1) <---------ARR14(2)    <---------MYB46(3)       --------->WRKY12    --------->ARR14(2)    <-------TEIL             <---------At4g35610     --------->At4g35610   --------->ARR11(3) <---------ANAC58            --------->At4g35610 ------>HVH21              <---------ARR11(3) <---------ANAC58       <------MYB46(1) ---->LBD16          --------->HSFB2a(2)     <---------MYB46(3)      <---------ANAC46 --->LBD16           <---------HSFB2a(2)    <---------ANAC46         <------MYB83 ------>WRKY18(1)   ------>ZmHOX2a(2)  --------->YAB1               --------->MYB111(2)            <- ---LBD16       <---------ATHB12--------->TGA1a --------->ALFIN1    --------->MYB46(2)         <-----   gacaaggagttgactcaaatgatcgagaagatcgacgtgaatggtgatgggtgcgtggacatagacgagtttggtgagctatacaagacgataatggacg  1818800                                                                                                    <                                                                                                    <                                                                                                    <                                                                                          <---------MYB52(1)                                                                                          --------->ARR14(2)                               <----------DOF2                                            <---------ARR14(2)                             --------->HSFC1(2)                          <---------MYB46(3)    ------         >>>>>>>>>TBF1       <---------HSFC1(2)                         --------->ALFIN1 <-------GAMYB -----ZmHOX2a(1)       ---------->DOF2                      ----------->GT1            <---------RAP2.6(2) ----TOE1(1)     <------ZmHOX2a(1)             --------->YAB1      --------->MYB52(1)  <---------DEAR3(1)   aggaagacgaagaagaagaggacatgaaagaagctttcaatgtgtttgatcagaatggagatgggtttataacggtggatgaattgaaggcggttttgtc  1818900  Previous    Next  AGI:  At1g05990.1    Description:  calcium-binding protein, putative. similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT4G03290.1); similar to calcium-binding protein [Lotus japonicus] (GB:CAB63264.3); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Parvalbumin; (InterPro:IPR008080) Range:  from: 1818446    to: 1819039    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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