Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------ARR11(3)                                                                              <---------ALFIN1                                                                         <---------ARR14(2)                                                                         <---------ARR11(3)                           ----------->GT1                               --------->ARR14(2)      <---                           <------NtERF2                                 <-----------GT1 --------->ARR11(3)                           ------>NtERF2--------->HSFB2a(2)       --------->LBD16       --------->RVE1(1)                         <---------ANAC58            <---------ALFIN1    --------->ARR11(3)      ----                         <---------ANAC58         ------->GAMYB   ------>NtERF2 ----------->RAV1(2) ----ZmHOX2a(1)          <---------ANAC46    <---------MYB59     --------->DEAR3(1)     --------->CCA1(1) >DOF2               <-----------RAV1(2)<---------HSFB2a(2)     <---------LBD16<---------ALFIN1 <----   ggacagaagaaacagaggttaccacaggcgggcaaaacccgtctggacataacccccattttcttctccgcctaatatccccccctgcaaatatctctat  1815100                               ------>ZmHOX2a(1)                                     --------->ATHB12                      ----------->RAV1(1)                                  --------->At4g35610          <---------ARR11(3)   <---------------AGL15                       <---------ZAT2    --------          --------->ARR11(3)  <---------MYB59               ---------->DOF2--------->ZAT2    --------    --------->ZAT6 --------->ANAC46                    <------ZmHOX2a(1)   <---------At4g35610 ------ARR11(3)    --------->ANAC58                ------->GAMYB       ------>MYB83 <---------YAB1 ----->ARR11(3)    --------->ANAC58             ----------->RAV1(1)    ------>MYB46(1)      ------>NtERF2 -----CCA1(2)    ---------->DOF2               --------->MYB46(3)    --------->TOE1(2) <---------WOX13(1)   atcttaagactaaatctttgaaagcaacaattcctaattgaagacaacaacaacagaggaatcaaagaaaacctagcagctgcgatttgattggcaccct  1815200                                                                                         ----------->GT1                                                                                        ----------->GT1                                                                                      ---------->DOF2                                                                                    --------->LBD16                                                                                   <---------HSFB2a(2)                                                                                   --------->HSFB2a(2)                                                                                   --------->LBD16                              --------->LBD16                                     <---------LBD16                            <---------LBD16                                      <-----------------AGL1                      ------>ZmHOX2a(2)                                  <---------HSFC1(2)      --------->ARR11(3)  --------->ARR14(2)                 ----------->GT1    <------ZmHOX2a(2)      <---------ARR11(3)  <---------ARR14(2)                ----------->GT1<-----------GT1 --------->AHL20(2)  <------ZmHOX2a(2)                    --------->DAG2 --------->HSFB2a(1)     <--- ->ANAC58           <---------ARR11(3)          --------->LBD16          --------->HSFC1(2)    ------ ->ANAC58           --------->ARR11(3) --------->LBD16   ---------->DOF2 <---------HSFB2a(1)   ------   aaattcaatatctagttaccaagatcgcaatccggagaaccctgaaaacccagaacaaaaaaagggaaatttagaattttcgatcccggaaaggaaataa  1815300                                                                                                -----                                                ---------->DOF2                           <------ZmHOX2a(1)                                            <------ZmHOX2a(1)                          <---------LBD16 ------TOE2(3)                             ----------->GT1                          <-----------GT1 ---->DOF2                               <---------LBD16                        <-----------ARR10 --->MYB52(1)     <-----------GT1     <-----------GT1                     <------ZmHOX2a(1)    ------   aggaatcaaattcagagaaattacaaatccaaattggaattaaccaggaaaaaagagagagatagagattgaagaaggagagaattttaccaggaagatg  1815400                                                                                                  <--                                                                                                  ---                                                                                              <------                                                                 <------NtERF2               --------                                                             <---------O2                    <-------                <---------ZAT2                         <-----------HVH21                   --------->YAB1   --------->ANAC58                                 <---------ZAT18                        <--------HAHB4   --------->ANAC58                               <---------WRKY18(1)                      <---------ICU4  --------->DAG2--------->At4g35610 --------->GLK1(2) <------NtERF2                       <---------YAB1 ---------->DOF2--------->ZAT2      <---------ARR14(2)<---------At4g35610                <-----------GT1 ------>GT1     <---------At4g35610 <-----------ARR10 --------->At4g35610*TSS       <----------DOF2 --->ALFIN1     <------NtERF2  ----------->GT1  <----------DOF2--------->ALFIN1   ---------->ID1  <--   gggaaaagccagagaggcagcttggggagaagaaggcaaatctaatcccgcttgcccgctcagaggtggcattgctcttctctcgtctttttatcattat  1815500                            --------->DAG2                           ---------->DOF2    <-----------GT1     --------->AHL20(2)   <---------AHL20(2)   <---------AHL20(2)                                                     <-----  --------->AHL20(2)   --------->AHL20(2)                                                  --------->AHL20(2) -------AHL20(2)      <---------YAB1                                                      <---------AHL20(2) ------>AHL20(2)    <---------ICU4                             --------->ETT(1)           --------->AHL20(2) ---ICU4            --------->ATHB51                ------>NtERF2 ---------->DOF2     ------>ZmHOX2a(1) ->ICU4             <--------HAHB4                  --------->LBD16              <---------GLK1(1) --YAB1            <---------YAB1                  --------->ANAC46    <-----------HVH21<----------DOF2 -------AHL20(1)   --------->ICU4              <----------DOF2 <---------ANAC46  --------->GLK1(1)   tttatttaatctctccatttcattattaaaaaagctctctctctctcttctttccgccattaatgtcggaaagtgtcagtccgaattcctctttaaatta  1815600                                                   ------>NtERF2                             ------>ZmHOX2a(2)    --------->LBD16                            <------ZmHOX2a(2)     --------->ZAT18                                  ==                           <---------ARR14(2)    <---------ANAC58                                  <-                 <-----------------AGL3          <---------ANAC46                                  --               <---------ARR11(3)                <---------ANAC58                                 <--               --------->ARR11(3)           ----------->HVH21                                     ===               --------->AHL20(1)         --------->ANAC55(2) <---------SPL7                     <---              --------->RVE1(1)       <---------ANAC58    <-----------GT1               --------->At4g35610   <-----------GT1         --------->ARR14(2)   <---------LBD16                         <---------At4g35610  --------->ARR14(2)       ------->TEIL<----------DOF2   --------->ARR14(2) <---------TOE2(3)    ---- ------GT1    --------->CCA1(1)       <---------ANAC58   <---------ARR14(2) <---------TOE1(3)    ----   ccaatatacccttcaaatatcttgtaatggatccactagtgcttatgtgatgcgggctatatacggtccgaatttttgaaggttgttttctgctgaatgg  1815700             ------>ZmHOX2a(1)                                                                 <-----             =====================================HOX2a_HOX2a                               <--------   --------->WRKY38(1)                                                                   <------MYB46(1) ===================HOX2a_HOX2a                           <---------ANAC58               <---------ANAC46 ------TEIL--------->ZAT18                      --------->TOE2(3)                        <------MYB83 ---->ZmHOX2a(2)                               <------------------------ANAC81          --------->MYB55(2) ----ZmHOX2a(2)                             <----------DOF2                             <---------MYB46(3) ===================HOX2a_HOX2a            ------>ZmHOX2a(2)                            --------->MYB111(1) ------ARR14(2)     <---------YAB1       <---------ARR11(3)                             --------->MYB46(2) ----->ARR14(2)  <---------YAB1          --------->ARR11(3)        <---------AHL20(2)   <---------AtMYB61 --->TEIL  <---------ZAT18          <----------DOF2       <---------ANAC58              --------->MYB111(2)   atccattgactagtcctctatgattcttgacaattgttcttttgatcttttcttaatttttcttggtttttaattcccttcagaattggtttggtggttc  1815800                          <---------DAG2                  <---------AHL20(2)                  <---------AHL20(1)                  --------->AHL20(1)                 --------->YAB1                 --------->AHL20(2)                <---------YAB1              <---------ICU4              -------->ATHB1              --------->YAB1                        --------->YAB1             --------->AHL20(1)                     ----------->GT1             <---------YAB1   --------->ANAC46  >>>>>>>>>GT-1                              --------->ANAC58             --------->ICU4   <-----------GT1<------MYB83                                  --------->ANAC58             --------->AHL20(2)              <------MYB46(1)                            <---------ATHB12 --TEIL----------->GT1    <----------DOF2    ----------->GT1                  ----------->RAV1(1) -MYB46(3)   <---------AHL20(2)             --------->MYB59                 ------>ZmHOX2a(2)   atgactaaaccgaaaattattatattcgctttacacaatttttagtttggttaatagtaatacaattcaaatgtctgatccaacatagaaatcaagctat  1815900                                                          --------->ANAC58                                                          ------->GAMYB                                                          --------->ANAC46                                                          --------->ANAC58                                            ----------->GT1       <---------ARR11(3)                   --------->ZAT14     --------->LBD16  --------->MYB52(1)               --------->ZAT6         <---------LBD16   ------>MYB83               --------->ANAC46      <---------LBD16>>>>>>>>>MYB2 --------->GLK1(2)         <-----------HVH21          --------->MYB52(1)  ------>MYB46(1)                   --------->GLK1(2) --------->At4g35610               <---------ARR14(2)  --------->MYB55(1)            --------->At4g35610 <---------At4g35610               --------->ARR14(2) --------->AtMYB61              <---------At4g35610   ctcatctcaaatgtcatacactactcacaagacttaagaaccgggaatgtagaaaaccaaacgccaaaaatctgaaatatcagagagagcagaatatgtg  1816000  Previous    Next  AGI:  At1g05960.1    Description:  binding. similar to cyclin-related [Arabidopsis thaliana] (TAIR:AT2G41830.1); similar to binding [Arabidopsis thaliana] (TAIR:AT5G21080.1); similar to hypothetical protein OsJ_004318 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14493.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64787.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23570.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024) Range:  from: 1807972    to: 1815473    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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