Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <-----------GT1                                 --------->ANAC58                            --------->ZAT14                            <---------ZAT18                            --------->ZAT18                                           --------->TOE2(3)                            <---------ZAT14                                      <---------ANAC58            <-------GAMYB--------->RAP2.6(3)                                 <----------DOF2           <---------MYB46(3) <---------ZAT18                         --------->YAB1  --------->TOE1(3) ->ZmHOX2a(1)   <---------TOE1(3)--------->ANAC46                    <---------YAB1 -------->P ---->RAV1(2)   <---------TOE2(3)--------->ANAC58                 <-------TEIL   <---------ANAC58   -   gtgagtttgaaggctgttaaggcacaagactgcacacacaagttaactatctctctctgtcttaagggttcatgatagtctttgcttaccctaaatattg  1784400                                            <----------DOF2           --------->GLK1(2)           <---------WOX13(1)                                        ----           <---------ARR14(2)         <---------ANAC58                                          -----           <-----------ARR10          <---------ANAC58                                      ---------           --------->ARR14(2)        --------->ATHB12               --------->At4g35610     <--------          <---------GLK1(2)         <---------YAB1    --------->At4g35610            <---------------      ---------->DOF2            <----------DOF2      ----------->RAV1(2)           --------->ZAT2    <---------YAB1              <---------ANAC58   --------->MYB46(3)               --------->At4g35610  <---------ZAT6                <---------ANAC58 <-----------GT1<---------ANAC58    <---------At4g35610 ---------->GT1            <----------DOF2 <---------DAG2       <---------ANAC58    <---------ZAT2 >>   tatagtattaaagaatctgcacattgttactttggcttttgattgccttttgaaccatctgaagtttcttatctgaattgagttcaagctgcaaatggta  1784500                                                                                            ---------                                                                                       <----------DOF2 ----->MYB46(3)                                                                      <---------ANAC58 ---->SPL7                                         ---------->DOF2                   <---------ANAC58 ------>AtSPL8              ---------->ID1   <---------ANAC46                  <---------TOE2(3)    - -------AtSPL3        --------->ATHB12       <---------ANAC58                --------->AHL20(2)   <-- --AGL3        ---------->DOF2  <----------DOF2 <-----------HVH21            <---------AHL20(2)   --- >>>>>>>>>>>>>>>LFY   --------->ATHB51       <---------ANAC58 <-----------HVH21<---------YAB1  ------   ccaccattgtgtcataagaaagcattatttggctcttttacaaacttgcttgtcaaagagaacccttcatgcgacttaattaatattgcctttgtaataa  1784600           <---------ARR11(3)           --------->ARR14(2)                                                 <---------ANAC58           <-----------ARR10                                                  <---------ANAC58           --------->ARR11(3)                                                 <---------ANAC46 --------->ANAC58                                                           <------MYB83 --------->ANAC46                                                           <------MYB46(1) --------->ANAC58                                                          <---------MYB46(3) >YAB1     <---------ARR14(2)                                             <---------ANAC46 -------->LBD16                           --------->WRKY38(1)             <---------ANAC58 -------LBD16        ----------------->AGL1      ------>ZmHOX2a(1)        <---------ANAC58 ------>TOE1(2)     ------>NtERF2      --------->ALFIN1                 <---------MYB46(3) ---->DOF2<---------CCA1(2)          --------->ANAC55(2)             --------->MYB52(2)         <----   cgcgcgaaacacaaatcttctctgcctaatgcagtagtcatgtgttgactccttcaaaatttccaagaagttagtggctggtgtgtcattgtcttcatct  1784700                                      ------>ZmHOX2a(1)  <---------ANAC58                          ----------->RAV1(1)            <---------ANAC58               <-----------GT1                         ----------->HVH21         ------------>CBF    <---------ARR11(3) ------DOF2      <------------CBF------->TEIL    --------->At4g35610   --------->ARR11(3)   ttttttttttttttttaaaaattgaatgcgacatgtactcctcaacgtataagctcaatgcttgttactgaaacatctcttgtctgattttttcaggcta  1784800                  --------->ZAT18                  <---------ZAT18                                                        ------------              <---------WOX13(1)                                                        <------------            --------->ATHB12                            --------->MYB52(1)           <----------DOF2        --------->DAG2                      ---------->DOF2   <---------GLK1(1)  --------->REM1(1)    --------->HSFB2a(2)        <----------DOF2        ------>ZmHOX2a(2)       <---------ANAC58    <---------HSFB2a(2)       <---------ANAC58      <---------AGP1            <---------ANAC58   <---  *TSS ---------->DOF2        <---------ANAC58      ------->TEIL         --------->ALFIN1<-----------   agtcttacagaaagtgattgggcacttcaatggctttcacaaatgaaaaagatggatctaagggatttgtgaagagagtggcttcatctttctccatgag  1784900    >>>>>>>>>TBF1                                               <----------DOF2 >>>>>>>>>TBF1                          <------ZmHOX2a(2) --------->At4g35610                     <-- --->AGL15                     <---------ANAC58       --------->ARR14(2)                         <--- -----AGL1  ----------->RAV1(1)<---------ANAC46       <---------ARR14(2)            --------->ANAC46 ---ZmHOX2a(1)       ------->TEIL      <---------ARR11(3) <---------At4g35610     ----------->RAV1(2) ----AGL15 <----------ID1      <---------ANAC58      <---------GLK1(2)           -------->P      ----   gaagaagaagaatgcaacaagtgaacccaagttgcttccaagatcgaaatcaacaggttctgctaactttgaatccatgaggctacctgcaacgaagaag  1785000                                         <---------REM1(1)                                         <---------ANAC46                                         --------->ALFIN1           ---------->DOF2  <---------SPL7                                      --------->ALFIN1    ------->GAMYB              ----------->HVH21      <-----------HVH21             <------MYB83          --------------->AGL15   --------->TOE1(2)   --------->At4g35610              <------MYB46(1)      --------->MYB46(3)      ------>ZmHOX2a(2)   <---------At4g35610             --------->MYB111(1)  --------->ANAC58       --------->ARR11(3) -------GLK1(1)                    --------->MYB46(2)   --------->ANAC58 <------ZmHOX2a(2) ------ARR11(3)                  <---------MYB52(1)--------->At4g35610  --------->ARR11(3) ----->ARR11(3)          <------ZmHOX2a(2)        ----------->RAV1(1)   <---------ARR11(3)   atttcagatgtcacaaacaaaacaaggatcaaaccattaggtggtgtagcaccagcacaaccaagaagggaaaagatcgatgatcgtgggacgaataaca  1785100                       --------->YAB1                                                           <----                      <---------YAB1                       <---------At4g35610        <---------TOE1(2)                    --------->YAB1         <---------ARR11(3)                         <---------TOE2(2)                 <----------DOF2           --------->ARR11(3)   ------>ZmHOX2a(1)    <-----------RAV1(2)               --------->HSFC1(2)      <------MYB83<---------GLK1(2)               --------->ANAC58               <---------HSFC1(2)      <------MYB46(1)     <---------GLK1(1)       --------->ANAC58<-              --------->GLK1(2)     <---------MYB52(1)    ------->TEIL          <------ZmHOX2a(1)  <-   agtttggaaaatggagaagctttgatgatagtgattccatttggttatcttcagattgtgcatctcctacttctcttcttgaggaacgcaggttatctgt  1785200                                <---------ANAC58             <-------GAMYB      <---------ANAC46    <---------ANAC58            <---------ANAC58    <---------ANAC58     --------->ZAT18 <---------MYB52(1)      --------->ZAT14 -----MYB52(1)           <---------ZAT14 --------ANAC58         --------->ALFIN1                      <----------DOF2                 ------- --------ANAC58<---------MYB46(3)       <---------YAB1<-----------ARR10  --------->YAB1      --------   ttcgtttcgtttctcggttgatgagagtgtagtgtcttggttatcaaaccttgccaaaacttccctttctctgaatcatcaagaagtaagttccattaaa  1785300  Previous    Next  AGI:  At1g05890.1    Description:  zinc finger protein-related. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT1G65430.1); similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G31760.1); similar to IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) [Arabidopsis thaliana] (TAIR:AT2G31510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83309.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44993.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64272.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR0028 Range:  from: 1779356    to: 1784528    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g05894.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64779.1) Range:  from: 1784802    to: 1786291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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