Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->AHL20(2)                 <---------AHL20(2)                 --------->AHL20(2)                 <---------AHL20(1)              <---------ARR11(3)                              <---------GLK1(1)                    <-              --------->AHL20(1)                              --------->GLK1(1)                   ---              <---------AHL20(1)                <---------RVE1(1)           <----------DOF2       <--     <----------DOF2  <---------AHL20(2)        <---------CCA1(1)     <--------P <---------YAB1 -----     <---------DAG2  --------->AHL20(2)        --------->ARR11(3)  --------->LBD16            ------- --------ICU4 --------->AHL20(2)               <---------ARR11(3) <-----------RAV1(2)        --------   agtatgactttttcaatattttatttaattctatatggttttcttagatgatatttttagactgaaatccaggttagtcttttatcaatgtgaagcggtg  1775200                     <---------ZAT14 --------ICU4        --------->ZAT18                             --------->TOE1(3) ------>ICU4         --------->ZAT14                --------->ICU4 -------YAB1         <---------ZAT18            <-----------HVH21--------->TOE2(3) ---->YAB1  <---------ARR11(3)             <---------YAB1  --------->YAB1 -->At5g28300 ------>ZmHOX2a(2)         <---------YAB1    <---------YAB1      <-----------GT1 --->GT1    --------->ARR11(3)    <---------WOX13(1)<---------YAB1   <-----------GT1         <-------   ataatttcacttgtgatctctagtacagtagaactaattgatatgatcagtgtcatgactataataacattaaactgtatttactagattgaaggcttta  1775300                                                  <--------HAHB4                                                  --------->ATHB12                                                  <---------ICU4                                                  --------->YAB1                                                 <---------ATHB12                   <---------AHL20(2)          --------->WOX13(1)                       --------->TOE2(3)                  --------->ICU4      <------ZmHOX2a(1)      ----------->GT1           <---------YAB1                  --------->AHL20(2)  <----------ID1        --------->DAG2           <-----------GT1                  <---------AHL20(2)--------->ANAC58  --------->AHL20(2)       --------->AHL20(2)               <---------ZAT6       <---------------AtSPL8 ---------->DOF2     <---------AHL20(2) ---DOF2     ----------->GT1        --------->ANAC58  <---------AHL20(2)      --------->AHL20(2)   --   agcatagagtctatatagtattaattagcaaatgtgataaggaacaaaacaatcatttaaataaagtaaacagttggacatttaattttaccatagatag  1775400              --------->AHL20(1)              <---------AHL20(1)              <---------AHL20(2)              --------->AHL20(2)         <---------ATHB12       --------->WOX13(1)      <---------ETT(2)    <-----------HVH21 ----------->RAV1(2) ---->ZmHOX2a(2)                           <----------DOF2                                     ------   atcgcctgtcaaccattttattgtttaaaaacgattcccaattgtctttggtaaactcttgtttaaggggaagtagaacaagtgtttgaacttattgaaa  1775500                                                                             <---------WRKY12                                             <-----------HVH21               <---------WRKY38(1)                                          <---------ANAC46                 <-----------HVH21                      --------->At4g35610 <---------ANAC58         --------->ZAT14                   ---------->DOF2        <---------ANAC58     --------------->AtSPL8               ----------->GT1       --------->ATHB12          <---------------AtSPL8            <---               <------MYB46(1)       <---------ICU4           <------------CBF  --------->MYB46(3) ---->DOF2     <------MYB83       ---------->DOF2  ---------->DOF2 <---------ZAT18            -------   agacatcggaagatggaaggtaaaagctgagaaacttaaagattgcttgtcacaaaagtaagagaattgtacacccttgtcaacgacttggtcttcttca  1775600                                                                                               <-----                                                                                              <------                                                                                          --------->ALFIN1                                                                                          <---------DEAR3(1)                                                                                         --------->ATERF1(1)                                                                                        --------->LBD16                                                                                       <---------ANAC46                                                                                      <---------LBD16                                                           --------->YAB1           <---------ARR14(2)                                                           <---------ICU4           --------->ARR14(2)                                                           <--------ATHB1         <---------MYB46(3)             <----------ID1                                -------->HAHB4        --------->ALFIN1        ----------->TBP                                   <---------YAB1      <---------DEAR3(1)      <---------------AGL15                               --------->ICU4      <---------AtMYB61<-----      --------------->AGL15                               <---------ATHB51 ------>ZmHOX2a(2) <-------     <-----------------AGL2               *TSS      ----------->GT1       <------ZmHOX2a(2) --------- ---------CBF----------->GT1         <------------CBF   --------->YAB1   <---------ARR14(2) <------NtERF2 ----->CBF---------->DOF2 ------>ZmHOX2a(1)      <---------AtLEC2        --------->ARR14(2)<---------ATERF1(1)   attgaattctataaaaggagaaaacgtcctctcttctcacattgtatttttgtatggataataattctgtaatcggatcggaggtggatgcggaggcgga  1775700                --------->At4g35610                                                    <---------GLK1(1)                <---------At4g35610                                                    --------->CCA1(2)                --------->ZAT2                              --------->ICU4            <---------ARR14(3)       <-----------HVH21                     --------->GLK1(2)                        --------->ARR14(2)     <---------TOE1(2)                       <---------ARR11(3)                       --------->ARR11(3)  <---------ANAC46<----------DOF2            --------->ARR11(3)                       <---------ARR14(2) --GAMYB       ------->TEIL                 --------->RVE1(1)                         <---------ARR11(3) ---MYB46(3) ------->GAMYB           ----------->GT1  --------->At4g35610           ----------->ARR10 -NtERF2 <---------WRKY12            --------->LBD16  <---------LBD16             <------ZmHOX2a(1) --ANAC46<---------WRKY38(1)        ----------->GT1   <---------At4g35610 ----------->HVH21       <-- >ATERF1(1) --------->ANAC46 <-----------HVH21   <-----------HVH21 <---------At4g35610--------->ARR14(3)   tgagtcgtatgtcaacgcagctttagaagatggtcagaccggaaaaaaatctgtccagcggaattatgcaactgttctgacagaggaagatattcgagcg  1775800                                                          <---------ALFIN1           <---------ANAC58                             ----------->RAV1(1)           <---------ANAC58                          --------->ANAC58          <---------TOE2(3)                          --------->ANAC58              --------->At5g28300 --------->HSFB2a(2)                            <---------At4g35610        --------------->AGL15 <---------HSFB2a(2)            <-----------GT1 --------->At4g35610<----------DOF2----------->GT1   < --------DOF2 <-------TEIL  <---------GLK1(2)---------->DOF2     <---------At4g35610             <---   cttatggaaattgacgttcaaagtgtttcagattttacttccctctccaaagctgaagccacacttctgctttctcacttaagatggtaaatgttttttt  1775900                                            <---------ANAC58                                            <---------ANAC58                                        <----------DOF2                                        <---------DAG2                                       <---------DAG2                                   <---------ANAC46                               --------->ANAC58                                    --------->ICU4                               --------->ANAC46                                 <------ZmHOX2a(1)           --------->CCA1(2)   --------->ANAC58             <---------ANAC46  <---------TOE2(3)        <---------TOE2(3)  --------->HSFB2a(2)    ------>ZmHOX2a(2)       ------->TEIL --------->ATHB12 ----------DOF2            <---------HSFB2a(2)    =====================================HOX2a_HOX2a --------GT1          <<<<<<<<<TBF1-------->P   <---------ARR11(3)  <---------AHL20(2)<---------YAB1   ttcttttcttaagatttgaatttcttcttctacaagcaaccccttttcttgatctctctgtttcttatattttatgtacttaggaatgttgattgtatat  1776000                                             --------->ATHB12                     ---------->DOF2        <----------DOF2             <-----------RAV1(1)          <---------At4g35610           --------->ZAT2                 <------NtERF2             --------->At4g35610           ----------->RAV1(2)           <---------DEAR3(2)         <---------At4g35610      --------           <---------ZAT2<---------ZAT6  ------>NtERF2          XXXXXXXXXXXXXXXXXXXX>MIR3932A/B           --------->At4g35610          <---------DEAR3(1)     <---------DAG2         <-----------GT1           <---------At4g35610         --------->ATERF1(1)  <---------ALFIN1     --------->AHL20(2)          <-----------RAV1(1)         <-----------HVH21    ------>ZmHOX2a(2)   ----------->GT1      -   gtaaacaatggtctgctggtgctcaaagtgttagagacagcgtcggcttattggagcttgatccaccttctgatgacaacgaagtaattaacaacaatct  1776100  Previous    Next  AGI:  At1g05880.1    Description:  zinc ion binding. similar to IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) [Arabidopsis thaliana] (TAIR:AT2G31510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44993.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867) Range:  from: 1775642    to: 1778552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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