Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ------->TEIL ->ANAC58                                                                        --------->ANAC58 ->ANAC58                                                --------->YAB1          --------->ANAC58 >ZAT18                                       <---------ANAC58                   --------->ANAC46 >SPL7  <---------YAB1                        <---------ANAC46                 <-----------GT1 ---AtSPL3                             ---------->DOF2  <---------ATHB12--------->YAB1 ---------->DOF2 ---AtSPL8                       ------>MYB83 <---------ANAC58 --------->TOE2(3) --------->ANAC55(2) -->AtSPL3                       ------>MYB46(1)    --------->MYB46(3) --------->At4g35610    ------- -->AtSPL8    <---------YAB1   <---------MYB59<---------ANAC55(2) --------->YAB1 <---------ANAC55(2)   aatttttcttatttttaaaattgaagaaatggaccaaataccaaagttacttgaaccaatgaaaacattaataagcagaattcacgtaccaaagaccaaa  1747900                               <---------AHL20(2)                              <---------AHL20(1)                              --------->AHL20(1)                              --------->ARR11(3)                              <---------ARR11(3)                             ========================================================================                             <---------------AGL15                          <---------YAB1                        <---------ICU4                            <---------TOE2(3)                        --------->YAB1                         --------->CCA1(2)        --------->WRKY38(1)--------->YAB1            --------->AtLEC2 ------->TEIL          --------->ICU4                --------->ANAC58                               < <---------ARR14(2) --------->AHL20(2)               --------->ANAC58 <-------TEIL                 -- --->DOF2       <---------AHL20(2)        --------->MYB111(1) --------->ARR11(3)        --------->AHL20(2)   gtgaatctcgttgatcatataatgaattatgatatatttagtagtagttagaaacatgcaaatagatataggttgatatgaaaattggcataaaatgtat  1748000                                                          --------->ANAC58         <---------------AGL15   <--------HAHB4           --------->ANAC58         --------------->AGL15   --------->YAB1           --------->ANAC46        <---------YAB1          <---------YAB1  <---------ANAC58  --------->LBD16             ------>ZmHOX2a(1) <---------ANAC46                    <---------YAB1 ========================MADS_MADS <---------YAB1  --------->REM1(2)            <----------DOF2 ---------LBD16       <-----------GT1<-----------GT1     ------->TEIL   --------->ARR11(3) ----->TEIL<---------YAB1<----------DOF2        <---------ANAC58        <---------ARR11(3)          <   gaaccggaatactattagtagcattaactttcctattattaacaaaactagcgtgtatgcacgttacagagaaagatttattctttattagagatgaaat  1748100                                                                                 <---------ANAC46                                                                              --------->ALFIN1                                                                             ------->MYC3                                                                             <-------MYC3                                                                            --------->O2                                                                           ------>MYB83                                                                     --------->ZAT18                -                                           <-----------GT1           <---------ZAT18               --                                      --------->AHL20(2) --------->DOF5.7(2)<---------O2 --------->AHL20(2)                                    --------->AHL20(2) --------->ANAC46    ------>MYB46(1)        ---                              ----------->GT1         <---------TOE2(2)  --------->DEAR3(1)     <----             <-------TEIL    ----------->GT1         ------>ZmHOX2a(1)   --------->AtMYB61    <------ ----------DOF2  <----------DOF2    <---------AHL20(2)<---------TOE1(2) --------->MYB46(3) --------->YAB1   ttctttagttatacatacactttggttttgtaagttaaaaaaatataactccctcctacgttaccaagaagtccaccaacgtggtggattttaaaataac  1748200                                                                           --------->MYB52(1)<-------                                                                           <---------DOF5.7(2)                                                                        ----------->GT1      <-------TEIL -------->MYB46(3)       ----------->GT1                               --------->DAG2        -------- ------>P            --------->DAG2                <------ZmHOX2a(1)  --------->DAG2         <------- ------>MYB52(1)    ---------->DOF2    --------->YAB1                ---------->DOF2         -------- -----MYB52(2)  --------->LBD16       ----------->GT1          ---------->DOF2       <---------TOE2(3) -----GT1    <---------ATHB12   --------->AHL20(2)----------->GT1<----------ID1     ---------->DOF2--   taaccaaaaacacaaatcagggaaaagtcgtaaattaaaactgataatttggaggaaaatatagaaaaagaaaaaggtaacgacattaaagaaggtgcac  1748300    --------->LBD16    --------->ZAT18                                  ------>ZmHOX2a(1) --ZAT18                 <---------At4g35610      ------>ZmHOX2a(1)                               <-- ->ZAT14                 --------->ZAT2       --------->ARR14(2)                                  <-- --ZAT14                 <---------ZAT2    <---------ANAC58                                       --- ->ZAT18                ------>NtERF2      <---------ANAC58                           ------>ZmHOX2a(1) -------->DOF2 ------>ZmHOX2a(1)    --------->DEAR3(1) <----------DOF2       --------->ANAC46     ---   ttaatgcgcagtatgtcctcttgtgccagcttgttgcaccgtcttccgtctcctcctctttccctctctctctctctccaaaccagtcctacttctctct  1748400                                                                                <---------GLK1(2)              >>>>>>>>>TBF1                                                   <---------YAB1      <---------STY1(1)                                              <---------ARR14(2)     --------->TOE2(2)                                               --------->ARR11(3)     --------->TOE1(2)                                               --------->ARR14(2)          ---- -------HSFB2a(2)           ---------->DOF2                          <-----------ARR10           <--- -------HSFC1(1)          --------->At5g28300                        <---------ARR11(3)        ------ ------>HSFB2a(2)       <---------DEAR3(1)      --------->SPL7       --------->GLK1(2)        ------- ------>HSFC1(1) >>>>>>>>>TBF1                <---------SPL7     <------ZmHOX2a(1)            <------   ctagaaacctagggaagaagaagaagacggtgaagcgagcgatgtcttcggacgacgaaggaagagaggagtatctcttcaagattgttgttatcggcga  1748500                                               <---------ZAT14       ----------->GT1                 ----------->HVH21       <---------DEAR3(2)             <---------MYB52(2)     <---------MYB52(1)              ======================MYC_MYB     <------NtERF2                   --------->ANAC55(2)    ------>NtERF2                    --------->ANAC58    <---------RAP2.6(3)              --------->ANAC46   --------->ATERF1(2)               <---------ANAC55(2)   --------->DEAR3(1)                <---------TGA1a   <---------ATERF1(2)               --------->TGA1a   <---------ANAC46                  --------->ANAC58                   ------>ZmHOX2a(2)   <---------TGA1a                   --------->ANAC55(1)               <------ZmHOX2a(2) ------>NtERF2                      ------->TEIL                      <---------ARR14(2) ----->ARR14(2)                  <---------ANAC55(2)                  --------->ARR14(2) ------ARR14(2)                  --------->ANAC58                  <------NtERF2 >NtERF2--------->At5g28300      --------->ANAC58 <---------------------WRI1 -->DEAR3(1)                  <---------MYB52(1)---------->CDC5   ------>NtERF2          --------->ANAC58 ---DEAR3(1)           <---------CCA1(2)--------->MYB52(1)       <---------DEAR3(1)      --------->ANAC58   ctctgccgtcggtaaatctaatcttctatctcgttacgcacgtaacgagttcagcgctaactccaaggcgacgatcggagtcgagtttcagacgcagagc  1748600                                                                   <------NtERF2                   <-                                                                  <-----------HVH21                --                                                                  <---------RAP2.6(3)              --                                                                  <-----------TGA1               ----                                                                  ------>NtERF2                <-----                                                                 --------->RAP2.3(3)           <-----                                                                 --------->ATERF1(2)           <-----                                                                 <---------ATERF1(2)           <-----                                                                 <---------bZIP60(1)         <-------                                                                 --------->bZIP60(1)        <--------                                                                 <---------ANAC58           ---------                                                            <---------ANAC58               <------NtERF2                                                            --------->ANAC55(2)            --------->ATERF1(1)                                                            <---------ANAC58              --------->At4g35610                                                      <---------ANAC58                   <---------ANAC46                               --------->CCA1(2)      <---------ANAC58                  <------NtERF2                    <---------WRKY12               <------ZmHOX2a(1)                  --------->ALFIN1                    <---------WRKY38(1)   <---------At4g35610    <---------ANAC58   <---------ANAC58                   --------->WRKY18(1)    <---------ZAT2 <---------ARR14(2)         <---------ANAC58                  <-----------HVH21       --------->ZAT2 --------->ARR14(2)       <---------At5g28300            ---------->DOF2   <---------ARR14(2)  <---------At4g35610      <---------At4g35610 <-----         ----------->GT1      --------->ARR14(2)  --------->At4g35610      --------->LBD16<---------At4g35610        <---------TOE1(3)     <---------GLK1(2) <-----------RAV1(2)<---------MYB52(1) <---------DEAR3(1)        <---------TOE2(3)   ----------->ARR10 <-----------HVH21--------->SPL7    <-----------GT1<----   atggagattgaaggtaaagaggtcaaggctcagatttgggacactgctggtcaggagcgtttccgtgccgtcacttccgcttattaccgtggcgctgtcg  1748700                                  <----------DOF2                           --------->ABI4(1)                           <---------SPL7                           <------NtERF2                           ------>NtERF2                          --------->RAP2.6(2)      ---------->ID1      --------->RRTF1(2) --------ZAT18            --------->DEAR3(1) ---->NtERF2              --------->RAP2.3(2) ------->ABI4(2)         <------NtERF2 ----->ATERF1(1)         --------->RAP2.3(1) ----DEAR4(1)           <---------ATERF1(1) ----DEAR3(1)           ------>NtERF2 ----DREB2C(2)          --------->LBD16 ----At1g77200         --------->ANAC46 ----HVH21            <---------LBD16  ---------->DOF2 ---RAV1(1)<---------DOF5.7(2) <---------ALFIN1                 --------->At4g35610 -->HVH21--------->DOF5.7(2)<---------ALFIN1          <---------DEAR3(2) ----MYB46(3)--------->ANAC46----------->RAV1(1)      <---------MYB46(3) -----DEAR3(2)        --------->MYB46(3)            <---------MYB52(1)                           <---   gtgccctcgtcgtttacgacattacccgccgcaccactttcgaaagcgttggacgttggctcgatgagcttaagagtaagtctcgatgtgaattatgcga  1748800  Previous    Next  AGI:  At1g05810.1    Description:  ARA/Ara-1/AtRABA5e/AtRab11D (Arabidopsis Rab GTPase homolog A5e); GTP binding. Identical to Ras-related protein ARA-1 (ARA-1) [Arabidopsis Thaliana] (GB:P19892); similar to AtRABA5d (Arabidopsis Rab GTPase homolog A5d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G31680.1); similar to small GTP-binding protein (GB:AAA68983.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 1748313    to: 1749459    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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