Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------CCA1(2) -------ANAC55(2)                                                     ----------->HVH21 -------ANAC58                                                       --------->LBD16 ------>ANAC55(2)                                                    <-----------HVH21 -------ANAC58                                                      --------->O2                   <- -----AHL20(2)                                    <---------ANAC58  <---------O2            <-------- ---->AHL20(2)                                    <---------ANAC46  --------->ANAC46      <----------DOF2 -------GT1                            <------MYB46(1)         <---------ARR14(2)       ------>MYB46(1) -HAHB4                                <------MYB83            --------->ARR14(2)       ------>MYB83 ->ATHB51                             --------->MYB59     --------->ANAC58            <---------MYB59 --ICU4                  --------->TOE1(3)        <---------ANAC58 <---------LBD16 <-----------GT1<-- -YAB1         <-----------RAV1(1)    <---------TOE2(3)   --------->ANAC46     --------->DAG2     --- >ICU4   ------>ZmHOX2a(1)    <-------GAMYB <---------YAB1--------->ANAC58    ---------->DOF2  <-----   acttatctctcctcttcttgttgctaaccttcagttggattaggttttgatttcgtttatacgacaatccccgtgactgaaaaagttaccaactttgata  1715600            --------->GLK1(2)           --------->ARR14(2)           <---------GLK1(2)                                               <---------ICU4    --------->DOF5.7(2)                                                    <--------ATHB1 --------GLK1(1)                                                           --------->ATHB51 -YAB1     <---------ARR14(2)                                             <---------ATHB51 -------ARR11(3)                                                     --------->TOE2(3) ------>ARR11(3)             <---------YAB1                    --------->TOE2(3)            <-------- ----WOX13(1)      --------->YAB1--------->YAB1     --------->ARR11(3)    <---------ATHB12  <--------   gatatcgttaccagattctactcatagttttgttattgtaatgcaagaagttgagttcttgtttacattaacttcaataattcactgagagtgacttttt  1715700                   <---------GLK1(2)                   --------->ARR14(2)                   <---------ARR14(2)                  <------ZmHOX2a(1)              --------->REM1(2)             --------->ALFIN1            <---------LBD16            --------->LBD16           <---------ANAC58           <---------ANAC58           <---------ANAC46          ------>ZmHOX2a(2)          ===============HOX2a_HOX2a        --------->ARR14(2)    ------>ZmHOX2a(1)    <---------At4g35610    ----------->RAV1(2)                                                                  <---------ARR14(2)    =============HOX2a_HOX2a                                  <----------DOF2            --------->ARR14(2) -DAG2----------->HVH21                                <-----------GT1              --------->AtLEC2 --DOF2 <---------ARR14(2)                  <---------LBD16------>ZmHOX2a(1)     <-------TEIL  ------   gttctcctctgatccgtggaggattctctatatgtgttttgttttttgggggggttttctcctgtttttagggactctattgattcatgcatatatgatg  1715800                                          --------->YAB1                                         <---------YAB1                                         -----                                    --------->ANAC58                                       --------->TOE2(3)                                --------->ANAC58          <----------DOF2                  --------->TOE1(3)                                --------->ANAC58      <-----------GT1                    <---------ARR11(3)                                --------->ANAC46     <---------AHL20(2)         <---------YAB1-------                           --------->GLK1(2)    <---------AHL20(1)   <---------At4g35610 --------->ARR11(3) ----->GT1         --------->AtLEC2 --------->ANAC58--------->AHL20(2)    <---------YAB1<---------GLK1(1)   ttattctctgtttatgagtttatgcaaataatctaagcaaggtatgataacatatttaatctttttgtttgagcttataattgtgcttagaaatcttaaa  1715900                                                                            <---------ANAC58                                                ------>ZmHOX2a(1)           <---------ANAC58        --------->At4g35610                 <---------ARR14(2)         <----------DOF2        <---------At4g35610                 --------->ARR14(2)        --------->TOE2(3) <---------YAB1                    ----------->HVH21          <---------WRKY18(1) --------->ICU4                    --------->WRKY12          --------->WRKY45 ---->YAB1               ------>NtERF2     --------->GLK1(1) --------->WRKY12    <---------ANAC58 -->AHL20(2) <---------ANAC46    --------->At4g35610         --------->WRKY38(1) <---------ANAC58   ataatgcttaagctgatgtgaacttgaggcctagcctctgaccacaaatcctagcctacttcgttgaccatacctttgtcttggcttaatattctaaatt  1716000                               <------MYB46(1)               ------>ZmHOX2a(2)                               <------MYB83                --------->AGP1                              --------->MYB59              --------->ARR11(3)                              <---------MYB46(3)           --------->ARR14(2)                              <---------AtMYB61            <---------ARR14(2)                              --------->MYB111(1)          <---------AGP1                             <--------P                    <---------ARR11(3)                           --------->ATHB12               <---------CCA1(2)                     *TSS  <---------MYB46(3)    <---------ICU4                 ------------>CBF               <---------YAB1             ---------->ARF1<---------ANAC58  --------->YAB1<------ZmHOX2a(2)                    <---           ------>ZmHOX2a(1)<---------ANAC58--------->ARR11(3)                                   ----       <---------ARR14(2)  --------->MYB55(2)<------ZmHOX2a(2)                 ----------->GT1   <---       --------->ARR14(2) <---------AtMYB61 <---------ARR11(3)        <----------DOF2         <------ZmHOX2a(1)   tctcttccaaatcctgtctcccaatgcattggttggtccaaaacaagatcatcatttcatagatcttgtaatctttctggtctgtaatttgctctaggat  1716100        ------->TEIL                                                          <---------YAB1     --------->TOE1(1)                                                    --------->GLK1(1)       ---     --------->TOE2(1)  <---------ANAC58                                  <---------CCA1(2)       <-- ---MYB46(1)            <---------ANAC58                         <----------DOF2            --------- ------->GT1            <---------ANAC46             <---------ANAC46    <----------DOF2 --------->DAG2 ---MYB83        <-----------GT1                   <---------ANAC46    <---------ZAT18 ---------->DOF2   ggtaaccttgtaccctatgtaacatgtcttgttagtataaattttgggtcatgttgtgttgatgactctttagcgcatttcttattgacaaaaggtatgg  1716200                               ---------->DOF2                                        ------>ZmHOX2a(2)                              <---------KAN4(2)                        --------->ANAC58                     <---------YAB1          --------->At4g35610       ------->GAMYB --------->GLK1(1) ------>GLK1(1)      --------->ICU4          <---------At4g35610       --------->ANAC58 -------GLK1(1)    --------->YAB1 <---------LBD16  <---------LBD16     --------->ANAC46    <--------- >CCA1(2)         --------->ICU4  --------->At4g35610    ---------->DOF2    <---------ALFIN1   aattctctagagacgctggaatgatgatggagaataagcggaatgtctgctctctcggagaaagcagtatcaaacgccacaagtctgatctctctttcag  1716300                                                                                                  ===                                                                                                  ---                                                                                                  <--                 ------>ZmHOX2a(1)                                                               ====              <---------YAB1                                                      ------>ZmHOX2a(2)          <---------ANAC58        --------->GLK1(1)                   <---------AtLEC2           <---  <---------TOE2(2)               <---------GLK1(1)                   <---------ANAC58           <---  <---------TOE1(2)<---------STY1(2)                                  <---------ANAC58     <---------  <---------TOE2(3)--------->STY1(2)                        --------->REM1(1)  -------->HAHB4    <--- -DOF2    <---------ANAC58  <---------AtLEC2               --------->SPL7     --------->ICU4   ------   ttccaaggttttgcttatcctagctagttttcatggatttctcggtcgaaatagtcttcggtacaacaaattgcatggtaatgatccgtccatctttgtt  1716400                                                                              --------->DAG2                                                                         <---------HSFB2a(2)                                                                         --------->HSFB2a(2)                                                                     <---------DAG2  <----------DOF2                                                                   ----------------->AGL1                                                                   <---------------AGL15                                                                   --------------->AGL15                                                                  ----------------->AGL1                                                                  <-----------------AG ===================================================================================MADS_MADS ------------>AGL15                                               ----------------->AGL3 -------------AGL15             <------MYB46(1)                   <-----------------AGL3 ===================================================================================MADS_MADS --------------AGL2           <--------P                          <-----------------AGL1 --------------AGL1    <------ZmHOX2a(1)                        <-----------GT1----------->GT1 -DOF2                <----------ID1           <---------At4g35610----------------->AGL2 --------------AGL3<------ZmHOX2a(1)     ------->TEIL   --------->MYB46(3)  ---------->DOF2 ---->ID1     <------ZmHOX2a(1) <------MYB83   --------->At4g35610<-----------------AGL2 ---------->ID1   ctcttaatggcaaacaggagaggaaggacaaggttggagaacgtatttcagctcttcaacaaatagtttccccttatggaaaggtaactttgtttttttt  1716500  Previous    Next  AGI:  At1g05710.1    Description:  ethylene-responsive protein, putative. similar to ethylene-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT2G31730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65949.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 1716021    to: 1717274    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version