Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ---------->DOF2                                                    ---------                  <---------ZAT14                        --------->YAB1                     ---------                  --------->ZAT14                     <----------DOF2                  <---------MYB52(1)  ------->TEIL    --------->ZAT18               --------->GLK1(2)                     <---------RAP2.6(3) --------ATHB12   <---------ZAT18              <---------GLK1(2)                     <---------ANAC58 --------YAB1  --------->At4g35610          --------->HSFB2a(2)                      ----------->GT1 ----MYB52(2)  <---------At4g35610          <---------HSFB2a(2)                      <---------ANAC58 >MYB46(3)    <-----------RAV1(1)        ------>ZmHOX2a(1)           ------>ZmHOX2a(1)<-------GAMYB <   aatgaatgcccattttctgctgcactataaagaggggtctctccttctagattctgctttgatgacaactccttcaactcttcaatgccgttacaagctc  1689100                                                                       --------->ZAT2                                                                  <-----------GT1                                                               <----------DOF2                                                       <-----------ARR10                                   <---------ZAT2      <---------ARR14(2)                                   --------->ZAT2      --------->GLK1(2)                                   <---------At4g35610 --------->ARR14(2) >ANAC58              --------->ARR14(2)  --------->At4g35610------>ZmHOX2a(1)         <<<<<<<<<TBF1 >ANAC58     <---------DAG2        --------->At4g35610<---------GLK1(2)--------->At4g35610        --- ---------ATHB12<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<------ZmHOX2a(1) <-----------RAV1(2)     ------>ZmHOX2a(1)   gaatcaattccataacctttcccaaattccccgttcgagctgcgagatgaagaggagaatctcctcttttaccaggtgagtcagtcttcttcttcctctc  1689200                                                                           <---------HSFC1(2)                                                                           --------->HSFC1(2)                                                                      --------->ANAC58              ------->TEIL                                            --------->ANAC46         --------->YAB1                                               --------->ANAC58        <-------TEIL                                                 --------->LBD16    ------>MYB83                                                   --------->TOE2(2)    ------>MYB46(1)                                                --------->TOE1(2)   ----------->RAV1(1)                               <---------At4g35610---------->DOF2  --------->AtMYB61              <---------ICU4<----------DOF2 ------->GAMYB<---------GLK1(2) --------->MYB46(3)   ------->GAMYB       ---------->DOF2     --------->MYB46(3)              <------ ------>MYB46(3)   --------->MYB52(1)  --------->TOE2(3)      <---------MYB52(2)   ------>NtERF2   accaccaacattcatgaaacttaactgtctctccattactaccctaaagcttttctgcttctcaacaaacccacgaaagcttctctgcctctccattgcc  1689300                                                                                  --------->ARR11(3)                                                           <------ZmHOX2a(1)  ---------->DOF2    ----                                                      --------->ZAT2   <---------ANAC58          ----   ------>ZmHOX2a(1)                                  <---------ZAT2   <---------ANAC46          <--- ----------->RAV1(2)                               <---------At5g28300 <---------ANAC58   <----------DOF2 ---ZAT18              <----------DOF2      ----------->RAV1(1)<---------MYB52(2) <---------ARR11(3)   ctctcctgtttctccattgctcttcctttgattccatgtttctcaacaacattcacagctaggaaactaacttgcttgtccaaagctcttccctttctca  1689400               --------->ANAC46               --------->ANAC58               --------->ANAC58              ------>MYB83              ------>MYB46(1)            <---------ALFIN1                                                      <---------ARR14(2)            --------->AtMYB61                                           ----------------->AGL1            --------->DEAR3(1)                                     <---------ANAC58           --------->MYB46(3)                                      <---------ANAC58      --------->ZAT14        --------->ZAT14       <---------At4g35610        --------->ANAC58--------------->AGL15        <---------ZAT14   --------->GLK1(2)              --------->HSFB2a(1)      --------->ARR14(2) <---------GLK1(2) <---------At4g35610                   --------->ANAC58<---------------AGL15 ------->RAV1(2)   --------->At4g35610  <---------ALFIN1 <---------HSFB2a(1)     <------ZmHOX2a(1) ----->At4g35610   ----------->RAV1(2)------>ZmHOX2a(1) --------->SPL7  <-----------------AGL1 ------At4g35610  ------->TEIL--------->At4g35610    --------->TOE1(1)  <-----------------AGL3   cctgattctctgcaccaacgcatctgagactctgctgttcctccacagagttacctcgaacgctctcttgcttctccataacaggaaccagagaactcat  1689500                                                                                                    -                                   --------->YAB1                                                  <-                            ------>ZmHOX2a(2)                                                 <------                           <------ZmHOX2a(2)                                              --------->At4g35610                          --------->ARR11(3)                                              <---------At4g35610                          --------->ARR14(3)                                           <---------MYB52(1)                          <---------AGP1                                              <-----------HVH21                          <---------ARR14(2)                                          --------->LBD16                          --------->ARR14(2)                                         <---------ANAC58                          <---------ARR11(3)         <---------ARR14(2)              <---------ANAC58                          <---------ARR14(3)         --------->GLK1(2)               <---------ANAC55(2)                          --------->AGP1             --------->ARR14(2)           <---------ARR14(2)-                        ----------->ARR10<---------DAG2                           --------->ARR14(2)-                      ---------->DOF2    <----------DOF2  ---------->DOF2         --------->GLK1(2)--           <---------MYB52(1)      <-----------GT1  <---------CCA1(2) <----------DOF2--------->ANAC55(2)   ggtatgcttctcccttagattacacaaagatcttgaataacaactttttctcccaaatctgaaagatgccaactttgtttgaagaatccgtgagctcttt  1689600              --------->ANAC55(2)              <---------ANAC55(2)              <---------ANAC58              ----------->GT1        --------->LBD16       --------->ANAC55(2)       <---------ANAC55(2)                                                           <-------TEIL    -------->P<---------ANAC46                                            <---------ANAC58  --------->AtMYB61                                                    <---------GLK1(1)  --------->MYB46(3)                                                   --------->GLK1(1) <---------At4g35610                                                  <---------GLK1(2) -------->ANAC58                                                    --------->LBD16 --------->CCA1(2) --------HSFB2a(2)                                                 <---------HSFB2a(2) ----DOF2     <---------ANAC58<---------ZAT2                       --------->HSFB2a(2) -------->ANAC46              --------->ZAT2                   --------->GLK1(1) --------->ICU4 -------->ANAC58    <-----------GT1                     <---------ANAC58  <---------ANAC46 ------->HSFB2a(2)  --------->MYB52(1)                  <---------ANAC58  <---------ANAC58         <-   tccagcaacccgtgtttcgtaataacagaaccagcttgaaaatggaaaaccctgacttccctgtgatttccagatttcttgtaaagattcaaaccgatgt  1689700                                 --------->ZAT2              ------------>CBF                                 <---------ZAT2  --------->ALFIN1      --------->ATHB12                                 --------->At4g35610 --------->At4g35610                                 <---------At4g35610 <---------At4g35610   ----------->GT1    <------            ----------->GT1    <-----------RAV1(2)<---------ZAT14    <---------WOX13(1)   <---------DAG2          ----------->GT1--------->DAG2        <---------ANAC46     <------------CBF      <----------DOF2 ---------->DOF2         <---------TOE2(3)   --------->ZAT14--------->ANAC58       ------------>CBF --------YAB1          ---------->DOF2       <---------ZAT14--------->ANAC58      --------->TOE2(3)   gatgaaagaagagagagaaaaaaaaaaaaggttgcagctgatttcagtagagtgtagctgaaacccaatagattgatttgtaaatctcaatgctttttgt  1689800                       --------->CCA1(2)                      <---------ARR11(3)                      --------->ARR11(3)                      --------->ARR14(2)                      <---------ARR14(2)                   <---------TOE1(2)                  <---------LBD16              --------->GLK1(2)             <---------GLK1(2)                                                    <---------AHL20(2)             --------->ARR14(2)                                                  <---------AHL20(2)             --------->ARR11(3)                                             <----------DOF2           ----------->ARR10                                       <---------ZAT2--------->AHL20(2)       <---------ANAC55(2)  <---------ZAT6                  ------->TEIL    --------------------->WRI1    <---------ATHB12 <------ZmHOX2a(1)           <---------YAB1    <---------At4g35610 -----RAV1(1)<---------ARR14(2)                  --------->ICU4    --------->At4g35610            ---   gggcaaatcatgtaagattctcaggatatagagatagagagagagactgtgatgagtgactgcatcttcagctgttttctttattaatttcgctaaactt  1689900                                                           <---------ICU4                                                        --------->TOE2(3)               <---------YAB1                        <---------GLK1(2)     <----------DOF2            <----------DOF2 ----------->RAV1(1)        --------->ARR11(3)  <---------ARR11(3)      <---------DAG2       <----------ID1             <---------ICU4  --------->GLK1(2)       <----------DOF2    --------->ANAC46             --------->YAB1        <----  --------->ARR11(3)--------->ATHB12         --------->ANAC58          --------->WOX13(1)      <----- ------>HSFB2a(2)   <---------ICU4           --------->ANAC58 <-----------GT1              <---------   ccaaaatctttagtaatattagtgattactttttcttttgagttttgaagcaacaaattcttaattactatgtcaattatctccagtttaaaactttata  1690000  Previous    Next  AGI:  At1g05640.1    Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT2G31820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46358.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 1687435    to: 1689500    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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