Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ARR11(3)                                                                  --------->MYB52(1)                                                                 ----------->HVH21              <---------ZAT2                                    <---------MYB52(2)              --------->ZAT2 <---------ARR11(3)               --------->MYB52(1)              <---------At4g35610          ----------->GT1  <---------MYB59          ---------->DOF2              --------->At4g35610      --------->DAG2      --------->ANAC55(2)  <---------ANAC46          ----------->RAV1(1)--------->ARR11(3)            <---------ANAC55(2)  ----------->GT1    --         --------->REM1(1)  --------->GLK1(1)         <---------ICU4      <---------ARR11(3)     ----    <-----------GT1         <---------GLK1(1)         --------->YAB1     --------->YAB1       ------- ------YAB1 --------->MYB46(3)        ---------->DOF2<-------TEIL------->GAMYB  <---------ANAC55(2)<-   tgatattaactacaacagctggaatagaagaaatcttgagaaaagtcgttacacattcattacttaactgacgaatgatattatgtgaaaagaaaacatt  1681900                                                                      --------------->AGL15                                                                      <---------------AGL15                                                                     ----------------->AG                                                                     <-----------------AGL1                                                                     <---------ANAC55(2)        --------->YAB1      <---------ICU4                           --------->ANAC55(2)        --------->TOE2(3)   --------->YAB1                           ----------------->AGL1 ------------->AtSPL8      --------->ICU4                   --------->AHL20(1) ----->YAB1 <---------TOE2(3) <---------YAB1               --------->YAB1 -->TOE2(3) <---------YAB1 <---------ATHB51  <---------ANAC58      <-----------GT1          --------- --------------AtSPL8      <---------ATHB12  <---------ANAC58  <---------TOE2(3)     --------->At4g35610   aatagtactatcttaagataaaaaatgcaattatgaaatttcatattgcctgccaattgaaaaataatgttacctattgttgaaataagatgccatgcat  1682000                        <---------ATHB51                        --------->AHL20(2)                        <---------AHL20(2)                                        <---------AHL20(2)                    --------->AHL20(2)                                            --------->AHL20(2)                  ----------->GT1                                                <---------AHL20(2)                <---------AtLEC2                                              --------->AHL20(1)             ------>ZmHOX2a(2)                                                <---------AHL20(2)            <------ZmHOX2a(2)                                                 <---------AHL20(1) ====           --------->ARR14(2)      --------->YAB1                          --------->YAB1   ---------           --------->ARR11(3)      --------->AHL20(2)              <------ZmHOX2a(1)     --------->YAB1           <---------ARR11(3)  --------->ZAT6                  ---------->DOF2--------->AHL20(2) ----           <---------ARR14(2) <---------TOE2(3)                --------->MYB52(1)--------->AHL20(2)         --------->ANAC58    <-----------GT1          --------->YAB1    ------>MYB83  --------->YAB1       <---------AtLEC2 --------->ICU4             --------->GLK1(1)    ------>MYB46(1)--------->AHL20(2) >AtLEC2 --------->ANAC58<---------ICU4            <---------GLK1(1)  <---------MYB59 --------->AHL20(2)   tcgcattttgcacgatctgcatgtaaataattaacaataaaaaaaaacgagagaaatcagaaaactaaaggacctaataataaattaataaaaataaaac  1682100                                    <--------ATHB1                                    <---------ICU4                                    --------->YAB1                                    -------->HAHB4                                    --------->ATHB51                                    <--------HAHB4                                   --------->AHL20(2)           --------->ANAC58        <---------YAB1      ----------->HVH21            --------->ICU4    ----------->GT1                <---------ATHB51    --------->TGA1a              --------->YAB1                              <---------ANAC58    <---------ANAC55(2)         <---------AHL20(2)                           <---------ANAC46    --------->ANAC55(2)      --------->AHL20(1)                       <---------ANAC58   <-----------------------TaNAC69(2)   <-----------GT1               <---------ANAC58 =============bZIP_DOF       <---------AHL20(1)                       <---------ANAC46 >AHL20(2) --------->ANAC58 --------->AHL20(2)                  --------->WRKY38(1)    --------->YAB1 ------>DOF2 <------ZmHOX2a(1) --------->AHL20(2)             <----------DOF2<---------ANAC58   aaaggaacgtgacaaggactgagagtataaatatataataattatctgtctctctctctctcaactttgactgcgtcttccttggagaatcacaaaacaa  1682200                                                                                                    -                                                                                                    <                                                                              ---------->DOF2      <-                                              <---------ARR11(3)            ------>MYB46(1)        <-            <-----------RAV1(1)               --------->ARR11(3)            ------>MYB83  <----------DOF2      <---------MYB52(1)                     --------->At4g35610           ----------->RAV1(1)     <-   <-------TEIL             <XXXXXXXXXXXXXXXXXXXXMIR391 >>>>>>>>>TBF1    --------->MYB46(3)     -----   aaacattcgtttttttgttgttgttgttgttgttgtttctcttgagaagctctctgaagaagaagactcatggaaaccaacaaagaccaagactttcgct  1682300                                                                           ------->PIF5                                                                           <-------PIF5                                                                          <---------bZIP60(2)                                                                          <---------ANAC46                                                                          <---------ANAC58         ---------->ID1                                                   <---------ANAC58  --------->ZAT14                                                      --------->ANAC46  <---------ZAT14                                                    <---------ALFIN1  --------->SPL7                                                  <---------ALFIN1  <---------ZAT18                                                 --------->DEAR3(1) -------->LBD16                                                  --------->MYB46(3)          -------- ---------SPL7                                                   <---------MYB55(2)         <-------- --------ANAC46                                                <---------ALFIN1           <---------ICU4 --------ANAC58                    <------------------------ANAC81--------->AtMYB61      --------->ICU4 --------ANAC58  *TSS  <-----------GT1                         --------->ANAC46        --------->YAB1 ------------->SPL14 <-----------GT1        <----------DOF2   --------->MYB46(3)    ------>ZmHOX2a(1)   tccgtacacttgtcgtcttcatatttctctctccctcttctcttctctttctctctctctctctcccaccaccacgacgtgctctcctctcattatcatt  1682400                                                                                  --------->ARR14(2)                                                                                  <---------GLK1(2)                                                                            --------->ETT(2)                                              <---------ARR14(2)        <---------WOX13(1)                        <-----------GT1       --------->ARR14(2)     <---------YAB1--------->ARR14(1)            <----------DOF2                   <---------GLK1(2)    ------>ZmHOX2a(1)        -------->HAHB4 ->YAB1     <---------DAG2           <---------ALFIN1              <---------At4g35610     --------->ICU4 -YAB1     <---------DAG2        ---------->ID1               <---------GLK1(1)   <---------ARR14(2)>   ctctctcactctcccttttctcttcttcaccattcgtccccattcccatattctctcgttcttgaattcctctgattgtcgatggattcgctaattatcg  1682500                                                      --------->ANAC58                                                      --------->ANAC58                                               ----------->GT1                                               <---------ANAC46                                    --                                              <------NtERF2                                        ==                                              ------>NtERF2                                        <-                                             ------>NtERF2                                         --                        --------->ANAC58     --------->LBD16                                      <--                        --------->ANAC58    --------->ANAC46                                      <--                        <---------ALFIN1    <---------DEAR3(1)                                    ---                  --------->WRKY12         --------->At4g35610                               <-------                 --------->ATERF1(1)       <---------At4g35610                      --------->ANAC46-               <---------ANAC58            ------>NtERF2                            --------->ANAC58=               <---------ANAC46            --------->LBD16                          --------->ANAC58<               --------->ALFIN1            <---------LBD16                      --------->YAB1    ---    <----------ID1--------->WRKY38(1)    <---------LBD16      ------>ZmHOX2a(1)<------ZmHOX2a(2)----- >>>>>>>>TBF1  <---------ANAC58         ------>ZmHOX2a(1)     ========================HOX2a_HOX2a----   aagaagaagacgaagaggcgttggccacgctcgtccctgttcctccgcggcgtaaaacgcattcctatagcctacaattcgatcacaagcctcaccatca  1682600                                  --------->At4g35610                                  --------->LBD16                                 --------->ANAC46  --------->LBD16               ------>ZmHOX2a(2) --------->ANAC58              --------->CCA1(2) --------->ANAC58              <------ZmHOX2a(2) --------->ANAC46             <---------ARR11(3) ------->CCA1(2)              <---------GLK1(2) =================================HOX2a_HOX2a -----ZmHOX2a(2)              <---------ARR14(2) ------->ARR14(1)             --------->ARR14(2) -------GLK1(2)               --------->AGP1                                     <---------GLK1(2) -------ARR14(2)            ----------->ARR10                                    <---------ARR14(2) ------>AGP1               --------->HSFB2a(2)                                   --------->ARR14(2) ----HVH21  ----------->RAV1(2)--------->ARR14(1)                        ------>NtERF2 ----->ZmHOX2a(2)          ------>ZmHOX2a(1)                            ----------->HVH21          <- =================================HOX2a_HOX2a                           --------->DEAR3(1)         -- ---------LBD16        --------->ARR14(2)                         --------->ARR14(2)       --------->LBD16 ------>ARR14(2)       <---------ARR14(2)             ----------->GT1 ------>ZmHOX2a(1)<---------ALFIN1 ------>ARR10     <---------TOE1(1)    --------->TOE2(3)     <-----------GT1------>NtERF2<---------LBD16 ----->At4g35610  <---------TOE2(1)   --------->REM1(1) <---------MYB52(1) --------->DEAR3(1) -------   gatccgcaaacacagcctggacgaggttcctagatccgctacattagcatccgaagccgtttatttcgattcctccgacgacgaattctccaccggaggt  1682700                                          <------ZmHOX2a(1)                                    <---------ZAT2                                    --------->At4g35610                                    --------->ZAT2                                    <---------At4g35610                                 --------->LBD16                               <---------LBD16                              ------->GAMYB                             --------->DEAR3(1)                             --------->ANAC46                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            ------>MYB83  <---------------AtSPL8                         <---------bZIP60(1)                          --------->AtMYB61                                              --------->ANAC46                         <---------MYB52(2)   --------->ZAT18                            <---------TGA2(1)               <---------At4g35610 --------->ARR14(2)                                    --------->bZIP60(1)               ------>NtERF2------>MYB46(1)   <---------ZAT14                            --------->TGA2(1)               --------->At4g35610<------NtERF2        <---------MYB52(1) <---------DREB2C(2)  ------              --------->DEAR3(1)--------->DEAR3(1)    --------->TOE2(3)  --------->DDF1 ----------->STF1 --------bZIP60(1)       --------->MYB46(3)   <---------ZAT18          <-----------RAV1(1)   ------>NtERF2 ------->bZIP60(1)--------->At4g35610     --------------->AtSPL8 ------>ZmHOX2a(1)    ----------->TGA1 ---->GT1  --------->ANAC46--------->MYB52(1) --------->ZAT14 ------>ZmHOX2a(1)       ----------->HVH21   aacatcacagaaaacgccgctgatgaaaccaacgccggagctgaggagtacaccatcgttaatcctcctcccaatgtcggtcttggggatgacgacaccg  1682800  Previous    Next  AGI:  At1g05630.1    Description:  5PTASE13/AT5PTASE13; inositol or phosphatidylinositol phosphatase. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G43900.1); similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G31830.1); similar to FRA3 (FRAGILE FIBER3), inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT1G65580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15614.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46359.1); contains InterPro domain WD40 repeat-like (In Range:  from: 1682317    to: 1687362    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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