Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <------MYB83                                                           <------MYB46(1)                                                          --------->MYB46(2)              <---------ARR14(2)                          --------->MYB59              --------->GLK1(1)                           --------->MYB52(2)              --------->ARR14(2)                          --------->MYB111(1)          --------->ETT(1)                               <---------MYB55(1)       <------MYB83                                    --------->TOE2(3)       <------MYB46(1)                              --------->MYB52(1)          <-------TEIL      <---------MYB46(3)                            ------>MYB83        --------->ATHB12     <---------ANAC58                               ------>MYB46(1)--------->ANAC58     <---------ANAC46                             --------->MYB46(3)  <<<<<<<<<<<<<<<<<LFY     <---------ANAC58        --------->YAB1      --------->ANAC58  --------->ANAC58   <---------MYB46(3)   --------->AHL20(2)       --------->ANAC58  --------->ANAC46 -------TOE1(2)   --------->LBD16               ------->TEIL   <-----------RAV1(2)         <---------ZAT14 -->ZmHOX2a(1)<---------GLK1(1)            ----------->RAV1(2)<-------TEIL   <---------ANAC58 ---->TOE1(2)<---------GLK1(2)        --------->ARR14(2)<---------MYB52(1)   <---------ANAC58   -----   tacgatggctggtcggaatccccaaaaaaaatgacaatactatctgcctgaacccaacgttaggttcagacgaaacattgggttcatatagactgcaata  1668900                                                -------->HAHB4                --------->GLK1(1)                                                --------->YAB1                <---------GLK1(1)                                                --------->AHL20(2)    <------------CBF            <--                                               <---------YAB1        --------->ATHB12  --------->MYB46(3) *TSS                                    ----------->GT1            <---------YAB1--------->TOE2(3) ---->YAB1                    --------->ZAT14 <-----------TBP      <-----------HVH21 <-----------GT1   acaactaatttgcaacctcttccaagttttagttcagacgagatggctaattatagatgatgtattagttgtcattggggaattcattaaccactcgttt  1669000                                      <----------DOF2                                      <---------DAG2                                 <------MYB46(1)                                 <------MYB83                                 <---------ANAC58                                 <---------ANAC58                                --------->MYB111(2)                                --------->MYB46(2)                                --------->MYB59                                --------->MYB111(1)           <---------ICU4                                --------->MYB52(2)            --------->YAB1                               <---------MYB55(1)            --------->ICU4                              <---------MYB52(1)     <-------GAMYB                                 <-           --------->YAB1    <-----------HVH21      <------MYB83                                  <--      <---------ANAC58       <-------GAMYB          ----------->GT1                         ---------      <---------ANAC58      <----------DOF2         <------MYB46(1)                    ---------->ID1 -------AHL20(2)  <---------TOE2(3) <-------TEIL    <---------MYB46(3)        <---------ARR11(3)<----   taaaatgggcttatcagatttatgtttttgctgttaggtgcttttttaaacggctggttgaaaatgatcacttgtttcaacatatttttgtccgatttct  1669100                            <---------AHL20(2)                            --------->AHL20(2)                           <---------AHL20(1)                           --------->AHL20(2)              <---------ARR11(3)              --------->ARR14(2)              --------->ARR11(3)      --------->At5g28300  <---------AHL20(2)      <-------GAMYB     --------->AHL20(1)     ----------->GT1    <---------AHL20(1)  <<<<<<<<<SPL5         --------->AHL20(2)  <<<<<<<<<SPL4 --------->TOE2(2)  <<<<<<<<<SPL1 --------->TOE1(2)     --------->YAB1 --------------AtSPL3   <---------AHL20(2)                              <-----------GT1      <------- ----------------SPL14 --------->AHL20(2)                             --------->AHL20(2)  <----------DOF2 >GLK1(1)     <---------ARR14(2)     <---------ATHB12       --------->TOE2(3)         <----------DOF2 -----YAB1    --------->GLK1(2)    --------->WOX13(1)     <-----------GT1          <-----------GT1   aattgtacggttacaaaatctgcgaataaattattttcaatcaaacttatagatgttttttttcttaacaaattatacaagtttttttctttcttttttt  1669200                                                                                           <---------YAB1                                                                                          <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                      -------->HAHB4                                                                                      <--------ATHB1                                                                                      <---------ICU4                                                         --------->TOE1(2)            --------->ATHB51                                                         --------->TOE2(2)            --------->YAB1                                                 <---------YAB1                       <--------HAHB4                                              <---------AHL20(1)                     --------->AHL20(2)                                              --------->AHL20(1)                     <---------YAB1                                              --------->AHL20(2)                     <---------ATHB51                                           <---------AHL20(2)                        --------->ICU4                       <---------TOE2(3)  --------->AHL20(2)                       <---------ICU4                       <---------YAB1     <---------AHL20(2)                    --------->YAB1                   --------->YAB1        <---------YAB1 --------->YAB1         <---------AHL20(2)                  <---------ATHB51     --------->YAB1  <---------YAB1  --------->GLK1(2) <---------AHL20(2)                --------->YAB1         <--------HAHB4  <---------TOE2(3)   <----------DOF2--------->AHL20(2)               --------->ZAT6         <---------YAB1<---------YAB1    <---------GLK1(2)  --------->YAB1        <---------ARR14(2)    --------->ZAT14 <---------AHL20(2)   --------->YAB1  --------->YAB1 -----------------ANAC81 --------->ARR11(3)--------->AHL20(2) ------------>CBF--------->AHL20(2)   ttgtttggcagttcttaacaataataagatagtttagtctattattaatttattattaacataagacaataagattcctttttaataataattaaaatag  1669300                                                                                          --------->ANAC58                                                                                      <---------HSFC1(1)                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                <---------AGP1                                                                                --------->AGP1                                                                                --------->ARR14(3)                                                                                <---------ARR14(3)                                                                                <-----------ARR10                                                                                --------->ARR14(2)                                                                                --------->ARR11(3)                                                                                <---------GLK1(2)                                                                                <---------ARR11(3)                                           <---------YAB1                      <---------CCA1(2)                                         <-----------GT1                  <---------ARR14(2)                                        <---------YAB1                    --------->ARR14(2)                                     <---------YAB1                       --------->GLK1(2)  --------                                     <---------AHL20(2)                  <---------GLK1(2)--------->ANAC58                --------->YAB1    --------->AHL20(2)              --------->WOX13(1) <---------LBD16               --------->AHL20(2) <---------AHL20(2)            <---------ATHB12<---------ARR14(2)           ------------>CBF    --------->GLK1(2) *TSS---------->DOF2   --------->LBD16--------->HSFC1(1)   acaagtagtagaatacaataaatatgcaacgagaatttttttattactataatgcaaaagtatcaaatcaatccagaatccagatcttctggaagcaaag  1669400                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                    ---------->DOF2                                                            <-----             --------->REM1(2)                              <---------GLK1(2)             --------->ZAT2 --------->ZAT18 ----------->GT1                     --------->ICU4 --------->ANAC58      --------->At4g35610 <---------ZAT18 <---------ZAT6                 --------->ANAC58    --------->ANAC58      <---------At4g35610 -->DOF2  <----------DOF2                       --------->ANAC58 ------>ZmHOX2a(1) --------->LBD16  <   tagttcacaagactttgtagagtaaagacagataagttttgaacagactgaagcaatttttagattcctcaagtcaatttctctccccaaacagcttccg  1669500 ---->LBD16 ----ANAC58 ----ANAC55(1) ----ANAC55(2)        ----------->GT1                          ---------->ID1 ----ANAC58         <---------TOE1(3)                <----------DOF2                         <------- ----ANAC46         <---------TOE2(3)              <------------------------ANAC81           -------- ---------WOX13(1) --------->MYB52(1)   <---------GLK1(2)     <-----------GT1      <---------ATHB12   tgaatgacaaattgctaaatctaagggtaatactctgttacagtttctctcttcgctttcagtttttcgtttttctgcaattccaattacttctaagctc  1669600                                              --------->At4g35610                                              <---------At4g35610                                           --------->GLK1(1)                                          --------->ARR14(2)                                          <---------GLK1(2)                                          <---------ARR14(2)                                      <---------ATHB12                                     ------>MYB46(1)                                     ------>MYB83                                    --------->WOX13(1)                                  --------->MYB46(3)          ------>ZmHOX2a(1)      --------->ANAC58         --------->TOE2(3)       --------->ANAC58      --------->ANAC58      ------>ZmHOX2a(1)        --------->MYB46(3)      --------->ANAC58                  <----------DOF2 --At4g35610          --------->CCA1(2) ----------->ARR10     --------->YAB1  <---------ANAC58 ->At4g35610         <---------ARR14(2)--------->YAB1 ------->TEIL            <---------ANAC58    ---   tctctgtccttccttactatggagatttgataaacaaccaatcagatttgctgacgaaccccatttatcatctagggtttgcttcagaatgcttttgaaa  1669700                                         <---------ANAC58                                         <---------ANAC58       <---------ZAT14                            ------>ZmHOX2a(2)                  --------->ALFIN1                           <------ZmHOX2a(2)                <------ZmHOX2a(1)                  <-----          <---------ALFIN1<---------ARR14(2)             <---------HSFB2a(2)     <---------ANAC58          --------->ZAT6  --------->ARR14(2)            ------>ZmHOX2a(2)        <---------ANAC58  <---------TOE2(3)       --------->ARR11(3)          --------->ARR11(3)<-----------GT1 <------------ ---------->DOF2          <---------ARR11(3)          --------->AGP1 <----------DOF2    <------------ ------>TOE2(3)  <---------At4g35610     <---------ANAC46--------->HSFB2a(2)   <---------AHL20(2)  <-   cattaaagttcaacacttcagcacttgggatcttaatgctgtttcttgtttactctgatctaggagtgtagcttttaccatttacttgtgtctgtttttg  1669800  Previous    Next  AGI:  At1g05580.1    Description:  ATCHX23 (CATION/H+ EXCHANGER 23); monovalent cation:proton antiporter. similar to ATCHX21 (CATION/H+ EXCHANGER 21) [Arabidopsis thaliana] (TAIR:AT2G31910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42759.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 1665463    to: 1668901    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05590.1    Description:  ATHEX3/HEXO2 (BETA-HEXOSAMINIDASE 2); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds. similar to ATHEX2/HEXO1 (BETA-HEXOSAMINIDASE 1), beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G55260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67165.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76146.1); similar to hypothetical protein OsJ_023880 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40397.1); contains InterPro domain Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883); contains In Range:  from: 1669349    to: 1671875    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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