Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->YAB1            <---------ICU4            --------->YAB1            -------->HAHB4           --------->ICU4           <---------ATHB51      --------->YAB1                                                                                <      --------->TOE2(3)                                                        ----------->GT1      -     ----------->GT1                                   ---------->DOF2         --------->ANAC58    --     <---------YAB1        <---------TOE2(3)       --------->ANAC46            --------->ANAC58   <--   --------->YAB1<---------YAB1                   <---------------AGL15       --------->DAG2     ---- ---->AHL20(1)<---------YAB1                      --------------->AGL15      ---------->DOF2 <-------TEIL   tactattatgttaattatgataatcaatttaggctatttagctatgaaattacacataaaagtatttgaacattatctaaaaagcaaaaactagcttcat  1661800                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------  --------->LBD16                                                    --------->PCF2           -------  <---------ZAT18               --------->GLK1(1)                  --------->HSFC1(2)         ------- ---------LBD16                 <---------GLK1(1)        --------->ANAC58                     ------- -------->ANAC46              <---------ICU4             --------->ANAC58          <------ZmHOX2a(1)< ------->MYB52(1)             --------->ATHB12 <---------ARR14(2)  <---------HSFB2a(1)        ------- -------ALFIN1<---------ICU4 <---------ATHB12 <------ZmHOX2a(1)    --------->HSFB2a(1)        ------- ----->MYB46(3)   ----------->GT1       <---------MYB46(3)         <---------HSFC1(2)        <-------   ccaccggactcactaaaaattagtgaatcaaatgatttccgatggtgaggatagagaagaagcaagagaaggtcccatggcagaaggagacatctcgccg  1661900     <---------ANAC58     <---------ANAC58    <------NtERF2   ------>NtERF2  --------->ATERF1(2)  <---------ATERF1(2) -------->At4g35610 ---------At4g35610 -------->ZAT2 ------->RAV1(2)                                            <---------ARR14(2) ---NtERF2<---------ANAC58                              <---------LBD16 ----->ATERF1(1)                                     ----------->HVH21 ---->ABI4(1)                                 <---------ARR14(2) ->NtERF2 <---------ANAC46                    ------->TEIL--------->LBD16 -----ATERF1(1)                     --------->ARR14(2)<---------WRKY18(1) --->RAP2.3(2)                      <---------ARR14(2)------>NtERF2 --->RAP2.3(3)                    --------->LBD16    --------->WRKY12 --->ATERF1(2)                   <---------ANAC46    --------->WRKY38(1) ----ATERF1(2)                  <---------LBD16    <---------At4g35610 --->DEAR3(1)                  ========================HOX2a_HOX2a -->DEAR4(2)                   ------>ZmHOX2a(1)------>ZmHOX2a(2) -->ERF1  <---------ANAC58    --------->TOE2(2)<---------GLK1(1)                                 <--- -->RAP2.3(1)              --------->ARR14(2) --------->ARR11(3)                                 ---- ---------ZAT2             --------->GLK1(2)  --------->ARR14(2)                      ----------->HVH21 -->ORA47(2)               <---------ARR14(2) <---------ARR11(3)     --------->At4g35610 <---------ANAC46 -->ATERF1(1)             <---------GLK1(2)   <---------AGP1--------->ARR14(2)      <----------DOF2 --ATERF1(1)         --------->At4g35610   <---------WOX13(1)        <---------At4g35610<---------TOE2(3)   cctgctggcatgtcttgaagaacagctagaatcctgcggatactgatggatctcgctgaccggaaactgtaagctctcttcatcgtctttgacgtagaga  1662000             --------->At4g35610          --------->ARR14(1)          --------->CCA1(2)         <---------ARR14(2)         --------->ARR11(3)         <---------ARR11(3)         --------->ARR14(2)     --------->ANAC46         --------->ARR11(1)     --------->ANAC58                                  --------->HSFC1(2)       ----------->ARR10        --------->ANAC58                                  <---------HSFC1(2) ------ARR14(2)            <-------TEIL                          --------->TOE2(3)--------->HSFB2a(1) ----->ARR14(2)           --------->CCA1(2)--------->YAB1    <----------DOF2   ---------->DOF2  <----   aaacgctcgaagatttgctgagtatgagatacacaagcccttgaatcagagcaaaaatgctcactttcattaacatgccttcaaagcttccttccattga  1662100                                    <---------DAG2                                    <----------DOF2                               --------->DOF5.7(2)                            --------->SPL7                            <-------TEIL                        --------------->AtSPL3                      <-----------GT1                           ------>ZmHOX2a(2)                      --------->MYB52(1)                       <------ZmHOX2a(2)                  --------->YAB1--------->WRKY45               --------->CCA1(2)                --------->ANAC58--------->WRKY12              <---------AGP1         <-------TEIL--------->ATHB51    <-----------RAV1(1)  --------->AGP1  <---------WOX13(1)        --------->CCA1(2) <---------MYB52(1)                  --------->ARR11(3)      *TSS -----TOE2(3)   --------->ANAC58--------->WRKY38(1)           <---------ARR11(3) <---------TOE2(3)   tgttttaaagattcagacaagaattatcggtacgttgacttttttgttgttgttgttgtcttaagatctatgagttagagattgatgtttctaatcagac  1662200                                                                              --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                  --------->TOE1(2)          <-------                                                                 <---------HSFC1(2)      --------->AHL20(2)                                                                 --------->HSFC1(2)      <---------AHL20(2)                                                                 <---------ZAT2         --------->AHL20(2)                  <------ZmHOX2a(2)                              --------->ZAT2         <---------AHL20(1)        <-----------TBP                                     <---------HSFB2a(2)    ------------>CBF   <---------TOE1(2)               ----------------->AGL1--------->ARR11(3)   --------->ANAC58   <---------TOE2(2)  ---------->DOF2                 <------NtERF2  --------->ANAC46   <---------AHL20(2)   agtcgctggtttatatagagatcgaaaagagaagatggccttatttgaccagaggcagagacctcgaagctacgaaacacaagtaaacaatttaatttat  1662300                                                   <---------O2                         <----------DOF2           --------->O2                         ====================================bZIP_DOF                    --------->AHL20(2)             --------->TGA1a                    <---------AHL20(2)             <---------TGA1a            --------->GLK1(1)              ---------->DOF2            <---------GLK1(1)              ==================bZIP_DOF           --------->ARR11(3)             <---------WRKY12                  <---------YAB1           <---------ARR11(3)             <---------WRKY45                 --------->AHL20(2)           --------->ARR14(2)             <---------WRKY38(1)            ------->TEIL --AHL20(2)<---------ARR14(2)            --------->WRKY18(1)    <---------ANAC46           <---------ARR11(3)   cgcatatgtagaagatttccatttaaactttgattttgacctggtcaaagtagacgtgagttttttttgtgtatgaatattatacatctactagataatt  1662400                                        <----------ID1             --------->ANAC55(2)          -----                                      ---------->DOF2              <---------ANAC55(2)         ------                             --------->YAB1                       <-------TEIL --------->AHL20(2)                       <---------------AGL15                     --------->CCA1(2)             <-----                       --------------->AGL15                     --------->ARR14(1)           <------                      <-----------------AGL1                    --------->ARR14(2)    ------->MYC3                      <-----------------AGL3---------->DOF2     <---------ARR14(2)    <-------MYC3   cgaactcttgtacaaaaaaaacattctacaatcggaaacaaaaagacaaagaacatgttgtcatgagatacgttttgtttattaaacacgtttttttccg  1662500                                                                 <---------DAG2                                                                 <----------DOF2                                                               ------->TEIL ---->LBD16                                                  --------->ZAT18      --------->ANAC58 --->HSFB2a(2)                                               <---------ZAT18      --------->ANAC58 ----HSFB2a(2)                       ----------->GT1   ------>ZmHOX2a(2)       --------->WRKY18(1) ---LBD16              --------->TOE2(3)         <---------At4g35610       ---------->DOF2          -   gaaaaaaaccaagtgcctctaagaacatcaatattcaaattgtcaatttttagatgatccaaatgcactttctgacttaaagtcaagctccatggtattc  1662600                                       <-----------GT1                                       --------->ZAT6                                  <----------DOF2                                --------->LBD16                                               -------                         --------->ARR11(3)                                                   <------                         <---------GLK1(2)<---------DAG2                                   <------ZmHOX2a(1)                         <---------ARR11(3)                                              --------->LBD16          --------->ANAC58    <---------LBD16                                           <---------HSFB2a(2)          --------->ANAC58   <---------At5g28300                                        --------->HSFB2a(2)          --------->ANAC46  <-----------GT1                                             <---------LBD16        <-----------GT1  --------->ARR14(2)                        ------->MYC3     --------->GLK1(1)   <---------GLK1(2)     <---------ARR14(2) <----------DOF2        <-------MYC3 <---------ATHB12 -------->YAB1      --------->MYB52(1)<---------YAB1              --------->ANAC46  <---------GLK1(1)   aaacagaatttcacgaactagcaaacagattttccgcgttatcactctttgagagtagtcgtcaatacacgttgatgtcccaatggatttccaggaatgt  1662700  Previous    Next  AGI:  At1g05575.1    Description:  unknown protein Range:  from: 1661690    to: 1662186    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05577.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46110.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59790.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67167.1); contains InterPro domain Protein of unknown function DUF966 (InterPro:IPR010369) Range:  from: 1662369    to: 1664397    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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