Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------------AGL15                                                              <-----------------AGL1                                                        ------->GAMYB                                                      >>>>>>>>>MYB98                                                      -------->P--------->ANAC46                                                      ------>MYB46(1)                                                      ------>MYB83                                                     ------>MYB83                                                     ------>MYB46(1)        --------->ANAC46                                                   <---------MYB59          <----------ID1  ---------                                                   --------->MYB46(3)     <---------DOF5.7(2)                    ------>ZmHOX2a(1)             --------->ANAC58       <---------WRKY12   ---------        --------->ANAC46<----------DOF2   <---------AtMYB61   <-----------------AG   ----------->GT1 --->ANAC58       <---------ANAC58  --------->DAG2--------->ANAC46   <---------TOE2(3)--------->At5g28300 --->ANAC58       <---------ANAC58 ---------->DOF2--------->ANAC58 ---------->DOF2--------->MYB52(1)<   aattgagtctacgagagatgtcctgtctttaaactcgtaaagttttggtcttacccaacccaatacccacaaaggtaaacgacataacggttaataatat  1638900                                                                                         <---------AHL20(1)                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(1)                                                                                  <-------MYC3                                                                                  ------->MYC3                                                                                 <---------O2                                                                                 <---------ANAC46                                                                                 --------->TGA1a                                                                                 --------->O2--------                                                                                 <---------TGA1a ----                                                                                 ----------->GT1 <---                                                 <---------TOE2(3)               --------->ANAC55(2)                                               <---------AHL20(2)            <-----------HVH21<------                                        <-------MYC3                        <------MYB46(1)  <-------    ----------->GT1                    <---------ANAC46                     <------MYB83 --------->AHL20(2) >AHL20(2)                            --------->LBD16            ==========================MYC_MYB >YAB1                  <---------ATHB12------->MYC3             <-------GAMYB   ==================== -----------GT1    --------->TOE2(3)<---------LBD16             ----------->GT1  <---------ANAC55(2)   tctaaccggtttataagtttacataaatcatttactaatccgcgtgtaattaagttttatgaaatgtggttattttgtaggtcacgtgaaatttattaat  1639000                                                            -------->ATHB1                                                            --------->ATHB12                                                            --------->ATHB51                                                            <---------ICU4                <----------DOF2                            --------->AHL20(1)                ===============================================================================MADS_MADS --------------->AtSPL8   <-------TEIL                     --------->ICU4     --------------->AGL15 ->AHL20(2)     --------------->AGL15         <----------DOF2 <---------YAB1 <-----------------AGL3 ----->AHL20(2) <---------------AGL15     <-----------GT1  <---------YAB1    ======================== ------AHL20(2)<-----------------AGL2 <---------DAG2       <---------AHL20(2)----------------->AGL3 ---AHL20(2)  ---------->ID1          <----------DOF2      <---------ATHB51  ----------------->AGL2 --AHL20(2)  <-----------GT1    ----------->GT1 ----------->HVH21        --------->ALFIN1----------->GT1 ==========================bZIP_DOF<-----------GT1       <---------ICU4  <---------AtMYB61   tttttagtacttgtttttcttttttgggttcaactagttacttttttcctttgacatcaaaattattgtagacgagtggtccatatatagatggtgaaat  1639100                   ==================================================================================                   <---------AHL20(2)                   <---------------AGL15                <---------AHL20(2)        --------->AHL20(1)                                    <----               --------->AHL20(2)         --------->AHL20(2)                       <---------ANAC46          ----------->GT1   ---------->DOF2            --------->DAG2              <---------ANAC58    <---------YAB1 --------->AHL20(2)     <---------AHL20(2)            --------->DAG2     --------->HSFB2a(1)    ------->TEIL--------->AHL20(2)       --------->AHL20(2)--------->MYB52(1)--------->ATHB12-------- --------->ICU4--------->ICU4    --------->ZAT18     ---------->DOF2  ---------->DOF2      <---------HSFB2a(1) ==================================MADS_MADS     <---------ZAT6  ---------->DOF2   <---------ANAC58   gaaatgaatattgagtaataaataaatatagaaagtgaacaaaaaaaattagtggaaaaggtaactggaaagaaaaggcttattggcttggcaagattcc  1639200                            <---------ANAC58                    ---------->DOF2                --------->DAG2           <---------------AGL15          --------------->AGL15          <-----------------AGL1         <-----------GT1    <---------ANAC58                         ---------->DOF2 *TSS =========================MADS_MADS                       ----------->GT1    <------ZmHOX2a(1) -----HSFB2a(2)---------->DOF2                       <---------AHL20(2)   --------->CCA1(2) ->GLK1(2)<-----------------AG                   <----------DOF2  ----------->GT1 ------------>CBF   ataagtttatttcaccaaaaaggaaagagtacttggccttgctctctctctcttttaaaatggtaaactggtaaagataggagactcaatttctagttca  1639300                                                                                        <---------ICU4                                                                                        --------->YAB1                                                                                       --------->ICU4                 <---------YAB1                     <---------GLK1(2)              --------->LBD16                 --------->ICU4           <---------ICU4                          --------->LBD16  --             <XXXXXXXXXXXXXXXXXXXXMIR391  --------->YAB1       <---------CCA1(2)  --------->HSFB2a(2)            <---------ANAC58             --------->ICU4      <---------ANAC58     --------->ANAC46 <-            <---------ANAC58           --------->YAB1        <---------ANAC58     <---------HSFB2a(2)            <---------ANAC46    <---------ANAC55(2)<---------ZAT2                --------->HSFB2a(2)           ---------->ID1   <-----------HVH21      <---------At4g35610           <---------LBD16   <-      <---------ARR14(2)<-----------RAV1(1)        --------->At4g35610           <---------HSFB2a(2)   tcaaaacatatttggcgttattatttctgtggtcacttgaataataatgtctcagcttctcttccgtctctcaaaactctcttcccggaataatgagctt  1639400                                                                          <---------ZAT18    --------->ANAC58                            <------MYB83            --------->ANAC46    --------->ANAC58                            <------MYB46(1)         --------->ANAC58   ------->TEIL     <---------YAB1             --------->MYB59          --------->ANAC58  <-----------GT1  <----------DOF2           <---------MYB52(1)       <---------AtLEC2 ------------->AtSPL8                     <---------YAB1          <----------DOF2 --------------AtSPL8                   --------->YAB1    <---------HSFB2a(2)              ---------- --------------AtSPL3--------->ATHB12  <---------YAB1     --------->HSFB2a(2)        <---------YAB1   gtatgtacgcttctcttctctctttattggtttcgctctgtattatagttaggttttgttttagaaggctttgcagggaactaatttgtgattgtgtaac  1639500                                                                                    <-------TEIL                                                                                   --------->CCA1(2)                                                                                 --------->At4g35610                       <---------ARR14(2)                                  <---------WOX13(1)                       --------->ARR14(2)                                --------->ATHB12          <-                    <---------TOE2(3)                                   --------->AHL20(1)         <-                    <---------TOE1(3)                                   <---------AHL20(2)    <------                  --------->CCA1(2)                                     <---------AHL20(1)   <-------                 --------->ARR11(3)     <----------DOF2                 --------->AHL20(2)   <-------           --------->HSFB2a(2)      <---------MYB52(1)              <---------YAB1<---------ARR14(2)           <---------HSFB2a(2)    <---------ANAC58                  --------->AHL20(2)       <-------    ----------->HVH21 <------ZmHOX2a(1) <---------DAG2              <---------AHL20(2)       -------- ->GT1   --------->At4g35610      <---------ANAC58              --------->AHL20(2)--------->ARR14(2)<   taagaaatgacatctggaagataaggatttgagtatgcgttacttttctgttctgatgtctgagcattatataattaattggcagatacacaagagcgtt  1639600                                                                                                -----                                                                                               <-----                                                                                     ================                                                                                     ================                                                                                 <---------ARR11(3)                                                                       --------->REM1(1)      <------             ------>MYB46(1)                                          <-------TEIL   ------>ZmHOX2a(1)             ------>MYB83                                          <------NtERF2 --------->ARR11(3)           ==========================MYC_MYB                  --------->ANAC58  --------->GLK1(1)           --------->AtMYB61                                  --------->ANAC58 <---------ARR14(2) --------ANAC58       ----------->HVH21                       --------->ANAC46 <---------ARR11(3) --------ANAC58    <---------ARR14(2)              <---------ANAC46--------->ZAT2<---------ARR14(2) ---SPL7<-----------GT1    --------->O2            ----------------->AGL1      --------->ARR14(2) --HSFB2a(1) ========================MYC_MYB       <---------ANAC58<---------At4g35610        ------- --ANAC58  ------->GAMYB   <---------O2            <---------ANAC58<---------ZAT2--------->ARR14(2) --ANAC58 --------->MYB46(3)      <------NtERF2<---------ANAC58    --------->At4g35610     <--------- ->HSFB2a(1) -------->P    <---------TGA1a     <---------ANAC58 <------NtERF2  --------->ARR11(3)  -- ---------TOE1(2)  --------->ARR14(2) <---------MYB46(3)     --------->RAP2.6(3)<---------GLK1(1) ---   cgcttgttttcaaccagcccgtatttgacacttggcagcgttgttgaagacttgcctgaagaagacggcagctacatcggagatatcctcttgttcgatc  1639700          ------------>MYB.PH3(2)         <---------ZAT6   --------->ANAC58   --------->ANAC58                                <---------MYB52(1)  <---------At4g35610 ->ZmHOX2a(2)                                      --------->DOF5.7(2) --------->ZAT2 -ZmHOX2a(2)                                --------->DAG2             --------->At4g35610 =HOX2a_HOX2a                              ---------->DOF2           <------NtERF2 ==HOX2a_HOX2a                           --------->LBD16           --------->ETT(1) ---ARR14(2)                            --------->ANAC46           <---------DEAR3(1) -->ARR14(2)            --------->LBD16 --------->LBD16          <-----------HVH21 ------------WRI1      <---------LBD16 --------->HSFB2a(2)      <---------MYB46(3) ---->NtERF2          <---------LBD16  <---------HSFB2a(2)     --------->ALFIN1                  ---- ------>LBD16   <-----------GT1       <---------LBD16          <---------AtMYB61                 ----   cggccaaggaagagttagtcacagtccgggacaaaacaattcccgaaaagctcgttaactcgagagtggtcggagcttcacatggatggacatttttctc  1639800  Previous    Next  AGI:  At1g05540.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G30160.2); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 1639285    to: 1640810    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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