Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->TOE2(3)                               --------->TOE1(3)                                     <---------ICU4                          --------->ZAT2                                     XXXXXXXXXXXXXXXXXXXXX>MIR828                          <---------ZAT2                                  <---------ANAC58          <---------ATHB12--------->At4g35610            <---------GLK1(2)<---------ANAC58         <-   --------->GLK1(1)      <---------At4g35610      --------->YAB1      <---------GLK1(2)  --------->ANAC46   ------->TEIL --------->TOE2(3)                 <---------YAB1----------->RAV1(1) <---------ATHB12   aaatgaactccaatagtttcttaatctcagcagccttaatcttctctctactatcatcaaattctccaacatcgattcttgctcaaatcaatacaccatg  1600100                                                      <--------P                                                    <---------MYB46(3)                                                   --------->ALFIN1                                 -                                                   <---------AtMYB61                               --                                                 <------MYB46(1)                             --------                                                 <------MYB83                    <---------PCF2   <--                           <--------P           --------->ALFIN1              <---------ANAC46<------                  <---------ZAT6                <---------DEAR3(1)            <-----------RAV1(1) ---                  <---------ANAC58              <---------AtMYB61      <---------GLK1(2)     -------- ----------GT1    <---------ANAC58        --------->MYB52(1)  <---------ETT(1)--------->ALFIN1-------   ttcaccatctatgctctctagcgttacaggttgcacgagttttctaacgggaggtggtagttttccgacctcagattgttgtggggctcttaaatcgtta  1600200       <---------MYB52(1)  <---------ARR14(2)                     --------->ALFIN1  --------->ARR14(2)                 <-----------RAV1(2) -------->LBD16                     --------->LBD16                                              ---- ------->ANAC46                    ------->GAMYB <---------ATHB12                                <--- ->TOE1(3)                        <------------AtMYB77                 <----------DOF2           ---- -------LBD16                     --------->MYB46(3)           <-----------GT1                <------ ---MYB52(1)                     <---------At5g28300       ------>ZmHOX2a(1)   <---------CCA1(2) <--- -------------->AGL1            <-----------GT1--------->WOX13(1)   ------>MYB83              <------ ->TOE2(3)                      --------->ARR14(2)--------->YAB1    ------>MYB46(1)        ------->PIF5 -->DOF5.7(2)                   <---------ARR14(2)<---------ICU4  <---------MYB59          <-------PIF5   accggaaccggtatggactgtttgtgtctgatagtaaccgcaggtgttccaatcagtattcctataaaccgaactttagccatctctctccctcgtgcat  1600300                                                                         <---------AHL20(2)       ------>ZmHOX2a(1)                                                 --------->AHL20(2) --->MYC2                                                                <---------YAB1 <----------DOF2 ----MYC2                                         --------->AHL20(2)    <---------AHL20(1) --->MYC3                 ---------->DOF2         <---------YAB1        --------->AHL20(2)          - ---ANAC58             --------->AtLEC2           <---------AHL20(2)    --------->AHL20(1)  --------- ----MYC3      <------NtERF2          <---------MYB59<---------YAB1--------->AHL20(2)   ------------- ---ANAC58  --------->ATERF1(1)       <------------MYB.PH3(2)<---------MYB52(1)      ------>ZmHOX2a(1)   gtggcattcctggtgtccccgttcaatgcaaaggtatctatctaacttctatattattattctgttttttaaaatataatttgagtcctactttgttttt  1600400                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(1)                                                                       <-----------ARR10                                                                       <---------ARR11(1)                                                                       <---------ARR14(2)                                                                       ------->TEIL                                                                       --------->ARR14(2)                                                                      <---------ARR14(1)            ----------->TBP                                           <---------CCA1(2)       --------->ARR11(3)                                           <---------ANAC58       <---------ARR11(3)                                           <---------ANAC46      <---------GLK1(1)                                             <---------ANAC55(2)     <---------ARR11(3)                                             <---------ANAC58     --------->ARR11(3)                                      --------------->AGL15<---------AHL20(1) <---------MYB52(1)                               <------------CBF  --------->ANAC55(2) -------->TOE2(3)<---------ETT(2)              ------------>CBF    --------------->AtSPL8      <----- ->ID1--------->GLK1(1)              <-----------GT1         <----------DOF2   <---------AHL20(2) -------->WRI1   --------->ETT(2) <---------AHL20(2) *TSS <-----------GT1      --------->AHL20(2)   ttcgttagatatctatatatcgacattaatggacatttttttctagtttttcaattgaattttctttatttcgtatctcattaaaatatttgtgaaactt  1600500              <---------ALFIN1              --------->AtMYB61           <---------ALFIN1       <---------At4g35610                        --------->AHL20(2)                         <-------       --------->At4g35610                        <---------AHL20(2)                         <-------    --------->At4g35610                           --------->AHL20(1)                      -----------  <---------GLK1(2)              --------->ICU4   <---------YAB1          <---------YAB1  <---------- <---------At4g35610       --------->LBD16       --------->AHL20(2)     --------->YAB1    <----------DOF2 --------->At4g35610      <-----------RAV1(2)    <---------AHL20(2) <---------YAB1        <---------DAG2 <---------ZAT2      <---------ALFIN1     <---------YAB1        <----------DOF2        <-----------GT1 -----DOF2<---------At4g35610  <-------TEIL--------->YAB1<---------WOX13(1)         ----------->GT1 <   tgcagcttctgcagcacctctccctactccaggtacttatgtttttgataattttattgatagactctttacaattatacttaagcttgttactttttat  1600600                                                                          --------->ARR14(1)                                                                          --------->CCA1(2)      --------->MYB46(3)                                   --------->AtMYB61--------->ANAC58     ------>MYB83                                          <---------ALFIN1<-------TEIL     ------>MYB46(1)                                   <---------ETT(1)  --------->ARR11(1)    ----------->RAV1(1)                                ----------->HVH21 <---------GLK1(2) --YAB1 ---------->DOF2                               --------->SPL7------>ZmHOX2a(1)     ------>ZmHOX2a(2) --AHL20(2)                                           --------->DEAR3(2) --------->ARR14(2) ---->AGL15                                    <----------DOF2      =============================HOX2a_HOX2a -----AGL15                    ----------->HVH21    <-----------HVH21    <---------ARR14(2) -----------GT1<---------TOE2(3)         ------>ZmHOX2a(1)--------->MYB46(3)--------->ANAC58------>ZmHOX2a(1)   tgttaccaacaaaagctaatgtatagttcataactcacaggtcctgcgtctttcggtccgaccacttctcctacagattcgcaaacttctgatcctgaag  1600700                                                                                       --------->TGA2(1)                                                                                       <<<<<<<<<<HY5                                                                                       --------->bZIP60(1)                                                                                       <---------TGA1a                                                                                       --------->TGA1a                                                                                       --------->O2                                                                                       <---------O2                                                                                       <---------TGA2(1)                                                                                       --------->ANAC46                                                                                       --------->ANAC55(2)                                                                                       ==============                                                                                       --------->bZIP60(2)                                                                                  <-------GAMYB                                                                                  ===============MYC_MYB                                                                                 --------->MYB52(2)                                                                      <---------ARR11(3)<-----------TGA1                                                                      --------->ARR11(3)<-----------HVH21                                                                      <---------GLK1(2)<---------bZIP60(1)                                                                  ---------->DOF2<---------MYB46(3)                                                                  ===============================bZIP_DOF              <---------At5g28300                               <---------HSFB2a(2)   <-----------STF1             <-----------GT1                                    --------->HSFB2a(2)   ----------->STF1         <----------DOF2                               --------->GLK1(2)   <---------ANAC46 ---------         <---------DAG2                               <---------GLK1(2)   <---------LBD16   <--------   gtactcgcgaactttttactgcaacttctagttctaactccaaaacattttgttcagaatttgtttctaaaagattttcgggtttgttgacgtcacataa  1600800                          <---------ALFIN1                         --------->DEAR3(1)                         <---------ZAT18                       --------->At4g35610                       <---------At4g35610                     --------->SPL7                   <---------SPL7                  <---------ANAC58 ------>NtERF2         <---------At4g35610--------->O2                            <---------AHL20(2)     --------->ARR14(2)------>NtERF2                                --------->AHL20(2)     <---------ARR14(2)<------NtERF2                     --------->YAB1  <---------TOE1(2)<-----------HVH21                  --------->MYB52(1) ========================bZIP_DOF --------->ANAC46--------------->AGL15              ------->TEIL >ANAC55(2)       <---------ANAC58----------->HVH21  ------>ZmHOX2a(1)      ------>ZmHOX2a(1)  ------ -ANAC55(2)   <----------DOF2     <---------ETT(1)<---------------AGL15    --------->TOE1(2)  >>>>>>>   ctcgcagggtctgcttctttccgtccgcccacttctccgacaacttcgcaaactcctaatggtaaaccatataaattcctaagaatgtattttagtaaca  1600900                                                      ------>ZmHOX2a(2)                                                      ===================HOX2a_HOX2a                                                     ====================HOX2a_HOX2a                                                     <------ZmHOX2a(2)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                <---------At4g35610                                                --------->At4g35610   --------->CCA1(2)                                                <---------LBD16       <------ZmHOX2a(2)                                            =============================HOX2a_HOX2a                                            ------>ZmHOX2a(2)        --------->ARR11(3)                                           <------ZmHOX2a(2)         --------->ARR14(2)                                           ==============================HOX2a_HOX2a                                           --------->GLK1(1)         <---------ARR14(2)                                           <---------GLK1(1)         <---------ARR11(3)                                          --------->ARR14(2)         --------->AGP1                                          <---------ARR14(2)        --------->GLK1(1)               <-----------GT1            <-----------ARR10         <---------GLK1(1)            --------->AHL20(1)            --------->ARR11(3)      <------ZmHOX2a(1)                 <            <---------AHL20(1)            <---------ARR11(3)  ------->GAMYB                  <-------            --------->ARR11(3)            <---------AGP1   --------->MYB52(1)             --------->AtMYB61 --->YAB1   <---------ARR11(3)         --------->ANAC58   <---------WRKY12             <---------ALFIN1 >>MYB98    <---------ICU4             --------->ANAC58   <---------WRKY38(1)      --------->At4g35610   taatttgttactaatattttcgagtttattgacaagtagacaaggatctcagcggatcgggcaacggaggagatccaatggggtttgctccacctccacc  1601000  Previous    Next  AGI:  At1g05450.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP)-related Range:  from: 1600453    to: 1601209    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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