Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ANAC58                                               --------->ANAC58                                               --------->ANAC46               --------->HSFC1(2)         --------->ANAC46       --------->ANAC46               <---------HSFC1(2)------>MYB46(1)              <---------ETT(2)               --------->HSFB2a(1)      --------->ANAC46 <---------ZAT2               <---------HSFB2a(1)      --------->REM1(1)<---------At4g35610        <----------ID1           ------>MYB83  --------->RAP2.6(2)---------->DOF2  <------ZmHOX2a(1)    ----------->GT1<---------ALFIN1   --------->At4g35610       --------->ANAC58 ---WRKY38(1) ------->TEIL  <-----------GT1--------->MYB46(3) <---------ZAT18      --------->ANAC58 ---WRKY12 <---------MYB52(2)  --------->AtMYB61         --------->ZAT2<----------DOF2   tggaggaattacgacgaaccttgccaagttaaacctccccctacaccagacgcaaaaccagctgtccacaaagctttgaaatggcaagagacaatagctc  1595400                ==============HOX2a_HOX2a                ------>ZmHOX2a(2)              <---------ARR11(3)              --------->ARR11(3)                          --------->ARR14(2)          <---------ANAC58                           <-----------------AGL1          <---------ANAC58                   <---------TOE2(3)      --------->TOE1(3)          <---------ANAC46                  <-----------GT1         --------->TOE2(3)        <-------      <-----------RAV1(2)                  <-----------GT1<---------ARR14(2)              --------->ANAC46    <-----------HVH21  ------>ZmHOX2a(1)  --------->AHL20(2)     <---------ALFIN1  <---------ICU4   tagactcttcaggcgtgatcttctcctataacagagcaaacaaatttaacattttgcccaaatttgcacaccttaattcatacaacaattacacacattc  1595500                                                                                          -----------                                                                                          <---------ANAC46                           <------ZmHOX2a(1)                                             ----------->GT1                        --------->At4g35610                                          --------->ATHB12                        <---------At4g35610        --------->GLK1(2)         --------->YAB1         - --GLK1(2)     <---------ARR11(3)         ---------->DOF2                 <---------CCA1(2)        <-   tcaacttattcgaacaatatcaattcagaggaaaactaattgaacaaagaaacaatcttgctgaagtttgaaacctgtatcatacatagattgggtaaaa  1595600                                                                    -------->P                                                                --------->ARR11(3)                                                                --------->GLK1(2)                                                                <---------ARR14(2)                                                                <-----------ARR10                                                         ---------->DOF2<---------ZAT2                                       ----------->GT1 --------->CCA1(2)--------->ZAT2              -                          <---------HSFB2a(2)       ----------->GT1 ------->TEIL                   -- >GT1     ---------->DOF2 --------->HSFB2a(2)     ---------->DOF2  <-----------GT1            ------- -------->ATHB12          --------->HSFC1(1)  <---------WOX13(1)<---------ARR11(3)         <------ZmHOX2a(1) --------YAB1            <---------LBD16   <---------AHL20(2)   --------->ARR14(2)  <---------TOE2(3)   cttgattgtagaaaaagagttgatttttctggaattgtctagggtttaattgaaaagataaaagagtatctacctgctcgggttttgaggctaggacaac  1595700                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                     --------->ANAC46                                                     --------->LBD16          ---------->DOF2                           --------->HSFB2a(2)  --------->At4g35610                               <---------HSFB2a(2)  <---------At4g35610                              <---------LBD16 -------->DAG2                                 --------->At4g35610 -------->DOF2  ------>NtERF2                  <---------At4g35610 ---->RAV1(1)  --------->RAP2.6(2)      <---------GLK1(2)    ------->TEIL --------->ALFIN1 <---------   aaaaagctgatttaaagcggccatagccatcgtgttcttaaatattctcagttcccagaaacgaatcgaagaacaagtgtgtgattacttcttctttctc  1595800                                                                     <---------At4g35610                                                                     --------->At4g35610                                                                    --------->GLK1(2)                                                          --------->MYB52(1)                           --------->ANAC58              <---------ARR14(2)                           --------->ANAC58              --------->ARR14(2)                           --------->ANAC46            ----------->ARR10                         <---------ALFIN1      --------->ATHB12     <-----------ARR10                        ------>ZmHOX2a(1)      --------->YAB1       <---------ARR14(2)        -------                 *TSS   =============================HOX2a_HOX2a    --------->ARR14(2)      <-------- -DOF2        ------>ZmHOX2a(1)               <------ZmHOX2a(2)     ------->TEIL          <----------   atggaaacttatagtccttctctctcctcactccatcgaatcgaatcgatcatggggaagaaccggttcgaatctgacttaattcgacattataaccgga  1595900                                                                    --------->ARR14(2)       --------                                                                    <---------ARR14(2)       --------                                                                 --------->YAB1              --------                                  <-----------------AGL3        <---------ATHB12          <---------ATHB12  ----------->GT1               ------>MYB46(1)                 <---------YAB1          ------>MYB83 -->LBD16       ----------->GT1 ------>MYB83                  --------->YAB1            ------>MYB46(1) -LBD16  ------------>CBF  <-----------GT1               <---------ARR14(2)        <-----------GT1 -GT1   >>>>>>>>>>>>>>>>>LFY  <---------MYB59      --------->SPL7<---------ICU4<---------TOE2(3)   gagggcgaaaaaccaatgtggaaaaatataaaccgaactaaaattgaaatcgatacgacgatactaatcataaccggtgttaatgtaaccaaatcaagcc  1596000                                    ------>MYB83                              <------MYB83                                    --------->MYB52(1)                        <---------MYB46(3)                                    ------>MYB46(1)   --------------->AGL15   <------MYB46(1)                    --------->AHL20(1)                <----------DOF2        <---------AtMYB61                    <---------AHL20(2)                <---------------AGL15 <---------MYB52(1)        --------->AtMYB61         <---------MYB59    <-----------------AGL3<-------GAMYB      >>>>>>>>>MYB2--------->AHL20(2)              ------>MYB46(1)        <---------MYB46(3) ->ANAC46 -------->P--------->AHL20(2)             ------>MYB83       --------->DAG2        --------- ->ANAC58 ------>MYB83  --------->AHL20(2)        <---------CCA1(2)  ---------->DOF2      --------->ANAC58 ->ANAC58 ------>MYB46(1)<---------AHL20(2)   --------->REM1(1)     ---------->DOF2       --------->ANAC58   aaaatgaaaaccaactcgaaattttattaaatcaaaccgaactgagttacacctatcttttttgggttacaaaaggccgttggtttaccaaaacgaaagc  1596100                     ------>MYB46(1)                     --------->ANAC58                     --------->ANAC46                     --------->AtLEC2                     --------->ANAC58                     ------>MYB83                                       -------->P               --------->ZAT14                                          ------>MYB46(1)               <---------ZAT18                                          ------>MYB83      <---------At4g35610                                             <---------MYB46(2)      --------->At4g35610   --------->YAB1<---------ARR11(3)          <---------MYB59          ------ ->DOF2        <---------ZAT14           <------ZmHOX2a(1)    --------->LBD16             --------->MYB52(1)   gtttgggcttctcacagtgaaccaagcaaatgacaatgaaacaggaacttacaactagtacatccgagagtgcctacccttgtacaactagacaacgaat  1596200                        --------------->AGL15                        <---------------AGL15                     <-----------GT1           <---------ANAC58                                     --------->YAB1                      -           <---------ANAC58                                --------->At5g28300              ---------           --------->ALFIN1                      --------->REM1(1) --------->YAB1           <-------- ->TEIL  --------->ALFIN1         --------->ATHB12        ----------->GT1        --------->YAB1     -   cgaagaaccaagtgtgtgtgttcttactacattgagtcattgagtactactacaactagacagtaacaataacaagtacttgttcataactatacctaaa  1596300  Previous    Next  AGI:  At1g05430.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO71187.1) Range:  from: 1594056    to: 1595817    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05440.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO71189.1) Range:  from: 1596006    to: 1597847    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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