Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ANAC58                                                        --------->ANAC46                                               ------------>CBF                                              --------->RAP2.6(2)                      *TSS                    --------->ANAC58                    ------>MYB46(1)           --------->ANAC58                    ------>MYB83              --------->ANAC46                  <---------MYB46(2)      --------->WRKY38(1)                  --------->MYB46(3)      --------->WRKY12                     <---------MYB52(1)                 --------->ANAC46     --------->DAG2    --------->ANAC58    <---------LBD16         < ------->DOF2  <-----------GT1       ---------->DOF2--------->YAB1        <-----------GT1   <-------- ->DOF2   --------->ATHB12   <----------ID1<---------WRKY18(1)      --------->AHL20(2)      <--------   caaagacgttattgatttcaccaaacaaaaaaaaacaaaaaaagttgaccgcaataacaaggaaggaacataaatttatccggtctgttttaaagattgt  1564200                                                                       --------->ARR14(2)                                                                       ------->TEIL                                                                       <---------ARR11(1)                                                                       <-----------ARR10                                                                      <---------CCA1(2)                                                                    --------->ANAC58                                                                    --------->O2                                                                    --------->ANAC55(2)                                                                    <---------ANAC55(2)                                                                    --------->ANAC58                                                                    --------->ANAC55(1)                                             <---------ZAT18        <---------TGA1a                                          ====================================MYC_MYB                                          <-------GAMYB             --------->TGA1a                                     <---------ARR14(2)             <---------O2                   --                                     --------->ARR14(2)  <---------GLK1(2)                  ---------                                  <---------ANAC55(2) --------->HSFC1(1)                    ---------                                  <---------ANAC46    --------->HSFB2a(2)     --------->LBD16-------- ------ZmHOX2a(2)              <---------ZAT18        ------>ZmHOX2a(1)<---------ARR14(2) <---------At4g35610 ----CBF                  <---------MYB52(1) --------->ZAT18    <-----------HVH21         --------->At4g35610 -GLK1(2)         ---------->DOF2 --------->ANAC55(2) <---------HSFB2a(2)     --------->ANAC46 <-----   ggatcacactgggccttcaaaatagcccattagttcacgtatacggttgcactctcctagaatttttgtcacgtatcttcagggaacgcttaagatgacg  1564300                      <--------P                     --------->At5g28300                   --------->ANAC58                   --------->ANAC58                  ------>NtERF2               --------->ABI4(1)               ------>NtERF2              --------->ANAC58              --------->DEAR3(1)              --------->ANAC46              --------->ANAC58              --------->RAP2.6(2)              --------->DREB2C(2)              ------->GAMYB              --------->DEAR4(1)             --------->ATERF1(1)             --------->RAP2.3(1)             --------->MYB46(3)             <------NtERF2            <---------ATERF1(1)            ------>NtERF2          <---------MYB55(2)                                                               --------->ZAT2        --------->ANAC46                                                                   <---------ZAT2        --------->ANAC58                                                                  --------->ANAC58   <---------SPL7<---------ALFIN1                                                         --------->ANAC58 --------->HVH21 --------->DEAR3(1)           --------->AHL20(2)                     <----------ID1 -->TGA1--------->ANAC58  <----------DOF2    --------->AHL20(2)              <------ZmHOX2a(2) -->HVH21 --------->MYB46(3)                 <---------AHL20(2)             <---------ARR11(3)      < ->MYB52(1)<---------ALFIN1          ----------->GT1     <------ZmHOX2a(2)  --------->ARR11(3)     <- ----ANAC46--------->DEAR3(1)  ---------->DOF2<---------AHL20(2)  ------->TEIL<<<<<<<<<<<<<<<<<LFY --   gatgacgaacgagccaccgccacggtagctttagaaagcccgtttaaaaaaatttgtagatcaaaatgaatatttgtagatcacaatgggccaagcttgg  1564400                                                                                             --------                                                                                            <-------MYC3                                                                                            <-------PIF5                                                                                            <-------MYC2                                                                                            <-------MYC4                                                                                            ------->MYC2                                                                                            ------->MYC3                                                                                           ==========                                                                                           <---------ANAC55(2)                                                                                           <---------O2                                                                                           --------->ANAC55(2)                                                                                 <---------YAB1                                                                            --------->O2   --------->O2                                                                            --------->ANAC58------->MYC4                                                                            --------->ANAC58------->PIF5                                                                            <---------ANAC55(2)                                                             ========================================bZIP_DOF                                                <---------ARR11(3)        <-----------GT1  --------->TGA1a <---------MYB52(1)                             --------->ARR11(3)   <---------ANAC58      <---------TGA1a -------GAMYB ---------->DOF2                --------->MYB52(1)      <---------ANAC58 ----------->HVH21 --------MYB46(3)    --------->MYB52(1)    <---------MYB52(2)<----------DOF2--------->ANAC55(2)    <- ------->MYB52(2) ------------------------>ANAC81     ------>ZmHOX2a(1) <-----------HVH21  ==========   gtcgttacgaagttgataaagactaacaaaacaaaaaacaaaaaaactaacatctcctatagcctttgattccttgtcacgttatgaaatgacacgtggt  1564500               <---------YAB1     <---------ARR14(2)     --------->ARR14(2)  <---------HSFB2a(2)                                              --------->MYB46(3)  --------->HSFB2a(2)      ---------->DOF2                  <-----------HVH21 ->ALFIN1----------->GT1----------->GT1                    <---------CCA1(2)    --------->ARR14(2) =========bZIP_DOF   --------->MYB52(1)               --------->ANAC46    --------->MYB52(1)     *TSS ---------DOF2 ----------->TBP                       --------->ZAT18 ----------->RAV1(1)  <---------AtMYB61 =========bZIP_DOF  --------->MYB52(1)     ------------>CBF--------->bZIP60(2)  <---------ARR14(2)<--   tcttttggaaccggtttataaataaccggtaaaccgaagagaagaaccaatagaatgcgccatatcacatccaacaaaacgggaacctgattttggtcgc  1564600                              <------ZmHOX2a(2)                             --------->ARR14(2)                <------ZmHOX2a(2)                ========================HOX2a_HOX2a               <---------ARR14(2)<----------DOF2              --------->GLK1(1)------>ZmHOX2a(2)            --------->ANAC58            ==========================HOX2a_HOX2a           --------->ANAC58                  <------            <------ZmHOX2a(1)------->TEIL          --------->ARR14(2)                       ---------            =========================HOX2a_HOX2a   <---------ARR11(3)                      ----------        --------->TOE1(2)    <---------ARR14(2)    --------->ARR11(3)                  ------>ZmHOX2a(1)        --------->TOE2(2) <---------WOX13(1)       --------->GLK1(2)                 <---------ANAC58 --------->TOE2(3)      --------->ATHB12           --------->ARR14(3)                <---------ANAC58 --------->TOE1(3)    <---------WOX13(1)     --------->AtLEC2                      <-----------GT1 -------CCA1(2)--------->ARR11(3)------>ZmHOX2a(1) <---------ARR14(3)        <---------At4g35610   ataccttaaacataggagatcgagattgatggatcctttctcaatccatccaaaatcttcagacccaatgctcttcttcatctaatttcctgtctgacgg  1564700       --------->HSFB2a(2)                                      <-------TEIL --------->ARR11(3)                                    --------->At4g35610              --------->ATHB12 ---ANAC46                                             ----------->RAV1(2)          --------->ATHB12 >MYB52(1)                                             <---------At4g35610        <----------DOF2<--- ->HVH21               <---------GLK1(2)              ------->TEIL        <---------GLK1(2)      <---   acacatcttgtagaatcagagaccagtttcttcagtagagactcgacgagaagttgcacctgaaaattcatattcagattaggggtttattgattcgtag  1564800                                                           --------->ZAT18                                                           <---------ZAT18                                                        --------->At4g35610                                                        <---------At4g35610                       <---------GLK1(1)               <---------TOE1(2)          --------->CCA1(2)                           <-----------RAV1(2)         --------->ARR11(1)                         ------>ZmHOX2a(2)         <---------ARR14(2)                        <------ZmHOX2a(2)         --------->ARR14(2)                   =============HOX2a_HOX2a         <---------ARR11(3)          <---------HSFB2a(2)<---------ZAT2              ------>ZmHOX2a(1)         --------->ARR11(3)          --------->HSFB2a(2)--------->ZAT2              <---------------AGL15   ---------->DOF2     --------->GLK1(1)      ------>ZmHOX2a(1)                     --------------->AGL15 ------ANAC58      --------->HSFB2a(2)       --------->TOE1(2)                  ---------->ID1   <--- ------ANAC58      <---------HSFB2a(2)      ----------->RAV1(2)   <----------DOF2  ----------------->AGL3   catgcgaaagagatatgggttatggaaatcgagcttcttctaaaactcctgcgatctcaggtgcccttctttttctgtttttgttcctaaaatttgaaac  1564900                <------NtERF2               --------->LBD16              <---------ANAC46              <---------RAP2.6(2)        <---------YAB1    --------->GLK1(2)                                                     <---- <---------TOE2(3)   --------->YAB1                                                      <-----------GT1 <---------TOE1(3)  ----------->GT1        <-------TEIL                                <---------YAB1 -------DOF2 <---------LBD16           <-------TEIL         <-------TEIL            <---------YAB1   tttagggtttatagttgcggcattgaaaattctgtaatcgatgcatacattgtttagaaatatacatctgtgtgcgattcccttggatgattatccagtt  1565000                                                                                             --------                                                                                            ---------                                                                                     <---------ZAT6                                                 <---------MYB52(1)                <---------ANAC46                                            ------>NtERF2                      <---------ANAC58 <----                                           ----------->HVH21                   <---------ANAC46 <----                                           --------->DEAR3(1)                  <---------TGA1a <-----                                          --------->ATERF1(1)           ---------->DOF2     ---------                                         --------->At4g35610            =================bZIP_DOF                                    <---------ICU4                     <---------AHL20(2) <---------TOE1(3)  --------->ATHB12                  --------->YAB1            --------->GLK1(2)======================  --------->YAB1             <-------GAMYB--------->DEAR3(2)  --------->ARR14(2)   <---------ANAC58 <---------YAB1             <---------MYB46(3)  --------->TOE2(3)      --------->AHL20(2) <---------TOE2(3) --------->ICU4          <----------DOF2 <---------At4g35610  <---------ARR14(2)   <---------ANAC58 -----MYB46(3)    <-----------GT1  <---------ATHB12          <---------GLK1(2) <---------ANAC58<-----   gttatgattagaccagaaattttcggtctttggttgaatcatgagccgacccttaatttcttagaatctgaaattaaagtgacttgagtgttaatgttaa  1565100  Previous    Next  AGI:  At1g05350.1    Description:  thiF family protein. similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68299.1); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Molybdenum cofactor biosynthesis (InterPro:IPR009036) Range:  from: 1560677    to: 1564122    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71145.1); contains domain VACUOLE MEMBRANE PROTEIN 1 (PTHR10281:SF1); contains domain MEMBRANE ASSOCIATED PROGESTERONE RECEPTOR-RELATED (PTHR10281) Range:  from: 1564597    to: 1567464    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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