Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ANAC58                                                                                  --------->ANAC46                                                  ---------->DOF2                 --------->ANAC58  - ------ZmHOX2a(1)                            --------->ZAT2                   --------->YAB1      --- ------->ICU4                            ------>ZmHOX2a(2)             <------ZmHOX2a(1)      ------- ---->ALFIN1             <---------GLK1(2)   <---------ZAT2           --------->LBD16      --------->ANAC58 ---DEAR3(2)             <---------ARR14(2)  --------->At4g35610    <---------LBD16        --------->ANAC46 --DEAR3(1)              --------->ARR14(2)  <---------At4g35610    <-----------RAV1(2)--------->AtLEC2 -LBD16                ----------->ARR10 =====================================HOX2a_HOX2a  --------->ANAC58   gaggattacatttagacagagtggctagattctcaacatgtgatcgcagctgcaaagcccaaacacattttcaggagaattcataagcaatgcaaacaac  1563700                               --------->ARR14(2)                         --------->GLK1(2)                       --------->HSFC1(2)                       <---------HSFB2a(1)        --------->CCA1(2)                     ------->GAMYB                       --------->HSFB2a(1)       --------->ARR11(3)            --------->KAN4(2)-----                  <---------LBD16      <---------ICU4                    ------->MYC3   ----------->GT1 -------->DAG2--------->AHL20(2)      <---------ATHB12                   <-------MYC3  --------->ANAC58 ------->DOF2 <---------AHL20(2) <-------TEIL---------->DOF2     --------->AtMYB61     --------->ANAC58 ---->RAV1(1)--------->AHL20(2)<---------ARR14(2)<---------ARR11(3)    ------->TEIL  --------->MYB52(1)   aaaaggctaagtgaaattaattcggagattccagattcaaatcaatacaaagatatactcgtaaacaccaatgcatgtgaaaattcccaacggaaaaatc  1563800                                                                             <---------At5g28300                                                                         --------->ARR14(2)          --------->ANAC46                                          --------->ANAC58               --          --------->ANAC58          <------ZmHOX2a(1)               --------->ANAC58              <--     --------->ANAC46    <---------ICU4                     --------->WOX13(1)        <---------TOE2(3)     --------->AtLEC2   --------->AHL20(2)                --------->ICU4 <---------ARR14(2)      <--- ---->YAB1--------->ANAC58     ------>ZmHOX2a(1)          <---------ATHB12  <-----------GT1      ----   ataatccatgaaacgcaatttgagtattaattcctcgaggaatcaacagtattggaagaaatcattcactaagcaaattcacagcgttaagaaaaacgag  1563900                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                       --------->At4g35610                                       <---------At4g35610                                      --------->ARR14(2)                                      <---------ARR11(3)             <------ZmHOX2a(2)         ------                                      <---------AGP1              --------->ICU4               ------                                      <---------ARR14(2)     --------->ANAC58                 <------                                      --------->GLK1(2)      --------->ANAC58                 -------                                      <-----------ARR10 <---------HSFB2a(2)                  --------   ----------->GT1                   <---------ARR14(1) --------->HSFB2a(2)        <---------ANAC58 ---->ZmHOX2a(2)                     <---------CCA1(2)<---------HSFB2a(2)          <---------ANAC46 ----ZmHOX2a(2)                     --------->LBD16   --------->HSFB2a(2)          <---------ANAC58 ------ARR14(2)                 <---------ARR14(2)<---------GLK1(1) <---------ARR11(3)       ------>MYB83 ----->ARR14(2)  <---------ALFIN1 <---------LBD16 --------->GLK1(1) --------->ARR11(3)       ------>MYB46(1)   atcggaagtaaaaacccaaacaccttgttgatcagagccggatctgagagagatttctcgagaacgtcaagatcatcgagcaatgccttgaatccaacct  1564000                              <---------ARR14(2)                              --------->ARR14(2)       --------->ZAT2         <---------ARR11(1)       --------->At4g35610    --------->GLK1(2)                         <---------ZAT18       <---------At4g35610    ------->TEIL                              --------->ZAT18 ->GAMYB                     <---------ARR14(1)                     <---------------AtSPL8        --- --->TOE2(3)     <------ZmHOX2a(1)     <---------At4g35610       <---------GLK1(2)     ----------->GT1 ---MYB55(2)   <---------TOE1(2)--------->TOE2(2)              --------->LBD16        <---------TOE2(3) -->MYB46(3)   <---------TOE2(3)--------->TOE1(2)            <---------LBD16        ---------->DOF2 >P<-----------GT1      --------->GLK1(1)<---------YAB1  <---------ALFIN1   ---------->DOF2 ---------   ccatttttcagctctcttaggatgagaaatcgaatctgcgatgctgatttgggagagagacactccggaatttgtacacaaagtcacaaaggtttaaagc  1564100                                                        --------->ANAC58                                                        --------->ANAC46                                               ------------>CBF                                              --------->ANAC58                      *TSS                    --------->ANAC46                    ------>MYB83              --------->ANAC58                    ------>MYB46(1)           --------->RAP2.6(2)                  <---------MYB46(2)      --------->WRKY12                  --------->MYB46(3)      --------->WRKY38(1)                  <---------MYB52(1)                 --------->ANAC46     --------->DAG2    --------->ANAC58    <---------LBD16         < ------->DOF2  <-----------GT1       ---------->DOF2--------->YAB1        <-----------GT1   <-------- ->DOF2   --------->ATHB12   <----------ID1<---------WRKY18(1)      --------->AHL20(2)      <--------   caaagacgttattgatttcaccaaacaaaaaaaaacaaaaaaagttgaccgcaataacaaggaaggaacataaatttatccggtctgttttaaagattgt  1564200                                                                       <-----------ARR10                                                                       --------->ARR14(2)                                                                       <---------ARR11(1)                                                                       ------->TEIL                                                                      <---------CCA1(2)                                                                    <---------TGA1a                                                                    <---------ANAC55(2)                                                                    --------->TGA1a                                                                    --------->ANAC58                                                                    --------->ANAC55(1)                                                                    --------->ANAC55(2)                                             --------->ZAT18        <---------O2                                          ====================================MYC_MYB                                          <-------GAMYB             --------->O2                                     <---------ARR14(2)             --------->ANAC58               --                                     --------->ARR14(2)  <---------GLK1(2)                  ---------                                  <---------ANAC55(2) --------->HSFB2a(2)                   ---------                                  <---------ANAC46    <---------HSFB2a(2)     --------->LBD16-------- ------ZmHOX2a(2)              <---------ZAT18        --------->HSFC1(1)      --------->ANAC46 <----- ----CBF                  <---------MYB52(1) <---------ZAT18    <-----------HVH21         --------->At4g35610 -GLK1(2)         ---------->DOF2 --------->ANAC55(2) ------>ZmHOX2a(1)<---------ARR14(2) <---------At4g35610   ggatcacactgggccttcaaaatagcccattagttcacgtatacggttgcactctcctagaatttttgtcacgtatcttcagggaacgcttaagatgacg  1564300                      <--------P                     --------->At5g28300                   --------->ANAC58                   --------->ANAC58                  ------>NtERF2               ------>NtERF2               --------->ABI4(1)              --------->ANAC58              --------->ANAC58              --------->RAP2.6(2)              ------->GAMYB              --------->DEAR4(1)              --------->DREB2C(2)              --------->DEAR3(1)              --------->ANAC46             --------->ATERF1(1)             --------->RAP2.3(1)             <------NtERF2             --------->MYB46(3)            ------>NtERF2            <---------ATERF1(1)          <---------MYB55(2)                                                               --------->ZAT2        --------->ANAC46                                                                   <---------ZAT2        --------->ANAC58                                                                  --------->ANAC58   <---------SPL7<---------ALFIN1                                                         --------->ANAC58 --------->HVH21 --------->DEAR3(1)           --------->AHL20(2)                     <----------ID1 -->HVH21 --------->MYB46(3)                 --------->AHL20(2)              <------ZmHOX2a(2) -->TGA1--------->ANAC58  <----------DOF2    <---------AHL20(2)             --------->ARR11(3)      < ->MYB52(1)<---------ALFIN1          ----------->GT1     <------ZmHOX2a(2)  <---------ARR11(3)     <- ----ANAC46--------->DEAR3(1)  ---------->DOF2<---------AHL20(2)  ------->TEIL<<<<<<<<<<<<<<<<<LFY --   gatgacgaacgagccaccgccacggtagctttagaaagcccgtttaaaaaaatttgtagatcaaaatgaatatttgtagatcacaatgggccaagcttgg  1564400                                                                                             --------                                                                                            ------->MYC4                                                                                            <-------MYC4                                                                                            <-------MYC3                                                                                            ------->MYC2                                                                                            ------->MYC3                                                                                            ------->PIF5                                                                                           ==========                                                                                           <---------O2                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC55(2)                                                                                 <---------YAB1                                                                            --------->ANAC58<-------MYC2                                                                            --------->ANAC58<-------PIF5                                                                            <---------ANAC55(2)                                                                            --------->O2   <---------TGA1a                                                             ========================================bZIP_DOF                                                <---------ARR11(3)        <-----------GT1  --------->TGA1a <---------MYB52(1)                             --------->ARR11(3)   <---------ANAC58      --------->O2 -------GAMYB ---------->DOF2                --------->MYB52(1)      <---------ANAC58 ----------->HVH21 --------MYB46(3)    --------->MYB52(1)    <---------MYB52(2)<----------DOF2--------->ANAC55(2)    <- ------->MYB52(2) ------------------------>ANAC81     ------>ZmHOX2a(1) <-----------HVH21  ==========   gtcgttacgaagttgataaagactaacaaaacaaaaaacaaaaaaactaacatctcctatagcctttgattccttgtcacgttatgaaatgacacgtggt  1564500               <---------YAB1     --------->ARR14(2)     <---------ARR14(2)  <---------HSFB2a(2)                                              --------->MYB46(3)  --------->HSFB2a(2)      ---------->DOF2                  <-----------HVH21 ->ALFIN1----------->GT1----------->GT1                    --------->bZIP60(2)  --------->ARR14(2) =========bZIP_DOF   --------->MYB52(1)               --------->ANAC46    --------->MYB52(1)     *TSS ---------DOF2 ----------->TBP                       --------->ZAT18 ----------->RAV1(1)  <---------AtMYB61 =========bZIP_DOF  --------->MYB52(1)     ------------>CBF<---------CCA1(2)    <---------ARR14(2)<--   tcttttggaaccggtttataaataaccggtaaaccgaagagaagaaccaatagaatgcgccatatcacatccaacaaaacgggaacctgattttggtcgc  1564600  Previous    Next  AGI:  At1g05350.1    Description:  thiF family protein. similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68299.1); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Molybdenum cofactor biosynthesis (InterPro:IPR009036) Range:  from: 1560677    to: 1564122    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71145.1); contains domain VACUOLE MEMBRANE PROTEIN 1 (PTHR10281:SF1); contains domain MEMBRANE ASSOCIATED PROGESTERONE RECEPTOR-RELATED (PTHR10281) Range:  from: 1564597    to: 1567464    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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