Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->ALFIN1                                                                        <---------AtMYB61           <                                                                        <---------ANAC46            <                                                                      <---------MYB46(3)           <-                                                --------->MYB52(2)    --------->MYB55(2)           <-                                              <---------MYB52(1)     <---------DEAR3(1)            <-                                              <--------P             <---------AtMYB61             <-                                            <------MYB83             --------->ALFIN1              <-                                            <------MYB46(1)         <-------GAMYB                  <-                             ------>MYB83   --------->MYB55(2)      <---------ABI4(1)              <-                             ------>MYB46(1)<---------MYB46(3)      <------NtERF2                 ---                         -------->P         --------->MYB52(2)     <---------MYB46(3)             <--                         --------->MYB52(1)<---------AtMYB61      <---------DREB2C(2)             <--                      --------->ZAT2       <---------MYB46(3)     <---------DEAR3(1)             ----                      --------->At4g35610 <--------P             <---------ABI4(1)     --------->ETT(2)                      <---------At4g35610 <---------MYB55(1) ------>MYB46(1)           <---------ETT(2)                 ----------->RAV1(2)     <-------GAMYB       --------->MYB52(1)       <--------P-----            <---------DAG2 <---------MYB46(2)<-------GAMYB--------->MYB46(3)  <---------ANAC46  <---- -->TOE2(3) <----------DOF2<---------MYB59<---------MYB52(1) ------>MYB83<---------MYB46(3)     -----   agacttggtttccactttaccctgagctaccgaaccatgactcggttggttagtcgggtaaccaatcggcggtggtggtgatgtacaggtagacatcggt  1559500         <---------At4g35610         --------->At4g35610        --------->MYB52(2)        --------->MYB59      <--------P     <-------GAMYB    <------MYB46(1)    <------MYB83   <---------MYB46(3)   --------->MYB55(2)  <---------MYB55(1)  <---------ANAC46  --------->ALFIN1 <------NtERF2 --------->ATERF1(1) <-------GAMYB ---------MYB46(3) ---------DEAR3(2) --------ANAC46 --------RAP2.6(2) --------DEAR3(1) --------ANAC58                                                  <---------DOF5.7(2) --------ANAC58                                                --------->DOF5.7(2) --------DREB2C(2)                                            --------->TOE2(3) --------DEAR4(1)            <-------TEIL                     --------->TOE1(3) ------>ATERF1(1)       --------->AHL20(2)                  <---------TOE2(3) ----NtERF2          <---------ANAC55(2)                    <---------TOE1(3) -------ABI4(1)      --------->ANAC55(2)                   <---------DOF5.7(2) -->NtERF2      --------->ANAC46                           --------->MYB52(1) ----------->RAV1(1) ---->ALFIN1   <---------TOE2(2)                         --------->ARR11(3)  <----------ID1 -----DEAR3(1) <---------TOE1(2)                       <---------YAB1      --------->ANAC46   ------- ------>HVH21 ------>ZmHOX2a(1)  ---------->DOF2       <---------TOE2(3)---------->DOF2--------->AHL20(2)   ggcggtgggttagctcctacgttacataatatacataaagagtttacaaatattcttaagataacgttaatggttaaaggcaacaaaaaataaaaacaga  1559600                                                                                       <---------ARR11(3)                                                                         --------------->AGL15                                                                         <---------------AGL15 ------             --------->At4g35610                               --------->ARR11(3)      --------->ARR11(3)          ----------->RAV1(2) <---------SPL7                   <---------ARR11(3)    --------->ICU4      <---------ANAC58       ------>ZmHOX2a(2)             ---------->DOF2   ---------->DOF2 <-------      <---------ANAC58      --------------->AtSPL3     <---------TOE2(3)------>ZmHOX2a(2) <---------AHL20(2) ---->GT1-------->P      <---------YAB1         <---------TOE2(3) <----------DOF2    ----------->ARR10   gaaaattttcttacctgcagactggttgtgatcgtactggctcatcttctaacgattaatgtaaagaactttgatctactaaaggcaaagattttatgat  1559700                                                                                                   --                                                                                                  ---                                                                                  --------->ARR11(3)                                                                                  --------->AHL20(1)                                                                   <---------ANAC55(1)            <--                                                                   <---------ANAC58              ----                                                                   <---------ANAC58             -----                                                                   <---------ANAC46             =====                                                                   <---------ANAC55(2)         ------                                                          --------->ZAT14         <---------AHL20(1)                                                          <---------ZAT14        <---------------AGL15                                                          <---------ZAT18        --------->AHL20(2)<-                         --------->WOX13(1)         --------->ARR11(3)     ----------->GT1    ------- --->ARR11(3)         ------->TEIL                  <-----------ARR10--------->ALFIN1     =========== --YAB1              <---------CCA1(2)              <---------ARR11(3) --------->ALFIN1   ---------->DOF2   tttgtgtctgaaaaatgttttttgtatctatcaagaatgtttctaatctttgaatatctctgcacaaatgcgtgtgtgtgtaaatatatagagaaagata  1559800       ====================bZIP_DOF       ---------->DOF2     <---------YAB1 --------->GT1       <------MYB83                                                  --------->AHL20(2) -------->GT1        <---------DEAR3(2)                                          --------->AHL20(1) -------TOE2(3)      <------MYB46(1)     <---------ANAC46                        --------->AHL20(2) ----->DAG2      <---------O2         --------->ALFIN1              --------->AHL20(2) ----->DOF2      --------->TGA1a     <-------MYC3                   --------->AHL20(1) ==========================bZIP_DOF  ------->MYC3                   <---------AHL20(2)              < --->CCA1(2)--------->ANAC58   <---------ARR14(2)                  --------->AHL20(2)               - ---------ID1    --------->O2  --------->ARR14(2)  --------->TOE2(3)<---------AHL20(1)         ------ -->ARR11(3)--------->ANAC58--------->YAB1 <------ZmHOX2a(1) --------->At4g35610--------->YAB1------- ==========================bZIP_DOF <---------ANAC46     <-----------HVH21    --------->AHL20(2)   --   aaggaaaaataaagaagccaagtcggtttatgagaaccgcgtggaggatagaacattaatgtcaccagaataaattccaaaaaaataatatagtaatcaa  1559900                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                     ------>NtERF2<--                                                                                   <---------ANAC58 <                                                                                   --------->ATERF1(1)                                                                              --------->ALFIN1 >>>>>>                                                                            <---------ANAC46   ------                                                                            <---------ANAC58   <-----                                                                            <---------ANAC58   >>>>>>                                                                           <-------TEIL <----------DOF2                                                                        <---------ANAC58=============                                                                        <---------ANAC58<---------DAG2                                                                     --------->DAG2<---------ANAC58 <  *TSS                             <---------GLK1(1)                ================================= ---------MYB46(3)               --------->ATHB12                   ---------->DOF2<---------ANAC46 < ---------->GT1                  <---------ICU4                  --------->ANAC58<---------ANAC46 <-- ---->DOF2            ------------>CBF      ----------->GT1      --------->ANAC58--------->ALFIN1<--- -->YAB1    <---------YAB1      <---------ATHB12             <---------HSFB2a(2)<---------SPL7 ------ ------->ALFIN1    --------->MYB46(3)     ---------->DOF2 <-----------GT1 --------->ALFIN1    -------   agtggttcaaagtttttattaacaaacaatacaaatgatttctgtaaagtaatttggatatatccagacgaaaagcgtgcgtggtgcgggctttatgtcg  1560000          <---------At4g35610     <---------ANAC46    <---------AtMYB61    --------->ALFIN1  --------->ALFIN1 ------->MYC2 ------->MYC4 <-------MYC4 <-------MYC3 <-------MYC2 ------->MYC3 ---------ANAC46 -------->ANAC55(2) -------->TGA1a ---------O2 -------->O2 ----------OsbHLH66 ---------ANAC55(2) >>>>bZIP19 --->bZIP60(1) ----ETT(2) >>>>bZIP23 =========bZIP_DOF ---------TGA1a                    <-----------HVH21                                       <--------- =========bZIP_DOF          ----------->HVH21                                           --------->GLK1(2) --------ABF1             --------->At4g35610                                          <---------ARR11(3) -------ALFIN1           <---------ARR11(3)                                            <---------GLK1(2) ------REM1(2)           --------->ARR11(3)   --------->HSFB2a(2)                    <---------YAB1 --->ETT(2)        --------->HSFB2a(2)      <------NtERF2                    --------->ANAC58     <-- -->DDF1  --------->At4g35610  <---------ALFIN1                              --------->ANAC58   <----   acacgtgtggtgttctgacttctcaaacatctcacacggtcgagtcgtcgagaccaagttttgttgaattgttgagagaacgacatcaagattcttttct  1560100     <----------DOF2                                                                            <----    <---------ANAC58                                                                ----------->GT1    <---------ANAC58                                   ----------->GT1       --------->DOF5.7(2)<---- -DOF2                    --------->YAB1              --------->ZAT6     --------->MYB52(1)     ----- -------AHL20(2)  --------->YAB1                    --------->MYB52(1) --------->MYB46(3)--------->DAG2 ------DOF2     --------->GLK1(2) <---------LBD16   <-----------GT1 <----------ID1 ----------->GT1   ttatttgctttgttgaagaatcatgtactaatagtcttcggaagttaactaaattaacagtaatatgaattcgacaaacgataactgggaaaaattggag  1560200                                                      --------->TOE1(3)                                                      --------->TOE2(3)            --------->ANAC58               <---------AHL20(2)                                      <-     --------->At4g35610                   --------->AHL20(2)   --------->ATHB12                  <--     <---------At4g35610                --------->ARR11(3)     --------->ICU4                     --- -----At4g35610            <---------ICU4--------->CCA1(2)     <---------YAB1                 ------- -----ZAT2  --------->ANAC58  <------ZmHOX2a(1) --------->AHL20(2)--------->ICU4             ------>ZmHOX2a(1) ---->At4g35610      --------->YAB1     <---------ARR11(3)   ----------->GT1                 ========   ctgatttagctaaaacgaaatattcaaaatcaggactacaaagatttaaattaaaacctcaaatagtgattagtaatctcttattagcggtattcctaaa  1560300                                                                      --------->MYB52(2)                                                                 --------->ICU4                                                              --------->TGA2(2)                                                             <-----------TGA1                                                             <-----------HVH21              --------->AHL20(1)                            --------->ANAC58              --------->AHL20(2)                            --------->ANAC46              <---------AHL20(2)                            ==================bZIP_DOF             <---------ATHB51                               --------->ANAC58             --------->ICU4                                 --------->bZIP60(2)                  ----             <---------AHL20(2)                             --------->TGA1a             <---------YAB1             --------->AHL20(2)                             <---------O2               <---------ARR11(3)       <---------TOE2(3)                                    --------->ANAC55(1)        --------->ARR11(3)  <---------YAB1                                            --------->ANAC55(2)        --------->AHL20(1) -----ZmHOX2a(2)                    --------->ANAC58        --------->O2               <---------AHL20(1) -------ARR11(3)              --------->YAB1               <-----------STF1           --------->CCA1(1) ------>ARR11(3)   <------MYB83     --------->ANAC58    <-----------GT1       <------MYB46(1)    <--- --->DOF2--------->AHL20(2)  <---------ATHB12    --------->TOE2(3) <----------DOF2    --------->RVE1(1) =====HOX2a_HOX2a  <------MYB46(1)  --------->ANAC46    --------->CCA1(2)     <------MYB83<----------DOF2   gatcatgttaatgaaataatttggtttcccactcataaacgcaattgccattctcaatatacacgtcatctttagttgataggttgaaatatctttgaat  1560400  Previous    Next  AGI:  At1g05340.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32210.1) Range:  from: 1558843    to: 1559902    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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