Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <-----------GT1                                                           ----------------------->TaNAC69(2)                                                       --------->LBD16             --------->WRKY12                  <---------YAB1                      <---------ANAC46             --------->WRKY38(1)       --------->TOE2(3)                             <---------LBD16             <----------DOF2    <---------GLK1(1)                               --------->MYB52(1)  <---------ANAC55(2) -AHL20(2)     <---------YAB1        ----------->RAV1(1)<------NtERF2 <-----------GT1            <---   atatagatttcttaattgttattgtagtaactaaatcgacaacatactagtacatgccggagtttatccaaatcacgttccttctttgactgaaattccc  1552100                 <---------ZAT14                 <---------ABI4(2)         --------->DEAR3(1)                          --------->AtLEC2      <---------DEAR3(2)        --------->ANAC46                             --------->ANAC58     <---------At1g77200        --------->ANAC58                             --------->ANAC58     <---------DEAR4(1)        --------->ANAC58                             --------->ANAC46     <---------DEAR3(1)        --------->MYB46(3)                 <---------MYB52(1)             <---------DREB2C(2)      <---------ALFIN1               --------->MYB46(3)                   --------->ETT(1)     <---------WRKY12               <---------At4g35610                <---------ANAC46  <---------ANAC58      <---------ANAC46<------------AtMYB77     --------->ARR11(3)     ----------->GT1  <---------ANAC46   --------->DEAR3(1) --------->MYB46(3)      <------ZmHOX2a(1)   <---------ATHB12  <---------ANAC58  --------->DEAR3(2) -------->P   <---------LBD16    <-----------RAV1(1)    <------ ------ALFIN1    --------->ZAT18    --------->At4g35610      --------->CCA1(2)  ----------------->AGL1   cactgcgtccacggccgattgcaccgtcgtgaaattgcagcaaccgttcttatccacgcagagataggatgttgtgtcggtgtccaatggaggtatattt  1552200                                                                     --------->ICU4                                                                  <---------YAB1                                                                --------->YAB1                                                                <XXXXXXXXXXXXXXXXXXXXMIR414                                                               <---------YAB1                                                               --------->ICU4                                                          <---------MYB46(3)                                                         --------->ALFIN1                                                         <---------ANAC46                                                         <---------AtMYB61    --------->ICU4                                                       <---------MYB46(3)     <---------YAB1                                                       --------->MYB55(2)   --------->YAB1                                                      <---------AtMYB61    <---------YAB1                                                    --------->LBD16--------->YAB1                                                   <---------DEAR3(1)<---------YAB1                                                   <---------DREB2C(2)     --------->ICU4                                   <---------ARR14(2) <---------DEAR3(1) --------->YAB1        <-----------HVH21         <---------GLK1(1)<---------ATERF1(2)  <---------YAB1    --------->GLK1(1)       <----------DOF2       <---------LBD16 --------->ICU4                <----    <---------GLK1(1)   <----------DOF2--------->LBD16--------->ALFIN1--------->YAB1   <---------AtMYB61 ---AHL20(2)        <-----------GT1--------->ARR14(2)<---------MYB52(1) --------->ICU4XXXXXXXXXXXXXXX   ttagggaaatcgtcgcatattgatacctttcttttggtatccgaaggtttatgccggtggtggtgatgatgatgatgatgatgatggtgatggtgatcac  1552300                                                                                        <--------ATHB1                                                                                        -------->ATHB1                                                                                        --------->ATHB12                                                                                        --------->YAB1                                                                                        <---------ICU4                                                                                        --------->ATHB51                                                                                       <---------YAB1                                                                                       --------->ICU4                                                                                       <---------ATHB51                                                                                       <---------ATHB12                                                                                  ----------->GT1                                                                                 --------->ANAC58       <---------ANAC58    <---------ANAC58                                      --------->ANAC58       <---------ANAC58    <---------ANAC58                                     --------->RAP2.6(3)       <---------ANAC46    <---------ANAC46                                     --------->SPL7    <---------GLK1(1)--------->ARR11(3)                                        --------->ARR14(2)    --------->GLK1(1)<---------ARR11(3)                                        <---------ARR14(2)  <------ZmHOX2a(1) --------->YAB1              <------ZmHOX2a(1)      --------->At4g35610 -----ANAC55(2)    <---------YAB1     ---------->DOF2     ---------->DOF2      --------->MYB52(1) XXXXX>MIR823   ------->TEIL<----------DOF2  <-----------RAV1(2)       <---------At4g35610   ataaggatttcttgaatgaatatgatattgctttgataccaaaagcttcaggatgtgttttaaagagagttttagatgccagaacggcaattattgcgat  1552400                                                                      <---------WOX13(1)                                                                    <---------MYB46(3)                                                                    <------MYB46(1)                                                                    <------MYB83                                                               <---------YAB1                                              <---------ARR11(3)  <---------WOX13(1)                -      --------->CCA1(2)                       --------->ARR11(3)--------->ATHB12                <----     --------->ARR14(2)               --------->YAB1         <----------DOF2                   ------     <---------ARR14(2)         --------->TOE2(3)    <---------ANAC46 <--------P            ---------   acctatggatatggataatgagattattttcatacctgaataatagaagataattctgtgaaactttgattggttgatttaggggtttgagagggaaagg  1552500                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                             <---------ZAT6                                                                           <---------ANAC46                                                                      <---------ANAC46                                                                      <---------AtLEC2            <-- --------->DOF2                                                       <---------ANAC58            <-- --ZmHOX2a(1)                            <---------AHL20(2)           <---------ANAC58 <---------MYB46(3) ----->GT1                             <-----------TBP            <------------CBF <------ZmHOX2a(1)- ->DOF2         *TSS              ----------->GT1               <---------AHL20(2)--------->ICU4  <--   ataaaaggaacttaatgaataagatgatgcataagagagttatttatacgaacaaatatgaaatatgaaattgcatgaagtgtaaggatttgttggaatg  1552600                                                                  ---------->DOF2                                                             ------>MYB46(1)                                                             -------->P                                                             ------>MYB83                                                            --------->MYB55(1)                                                           <---------MYB111(1)                                                           --------->MYB46(3)                                                           --------->AtMYB61                                                           <---------MYB55(2)                     ---                                                           <---------MYB46(2)                    ----            <----------DOF2<----------DOF2              <---------ALFIN1                   --------->AHL20(2)       <-----------GT1    <---------ANAC58             --------->MYB46(3)               --------->YAB1 -------ANAC46            <---------ANAC58            <------ZmHOX2a(2)         <----------DOF2 ----- -------ANAC58       <---------ICU4                  --------->ARR14(2)        --------------->AGL15 -------->AtLEC2     --------->ATHB12                <---------ARR14(2) <-------TEIL --------->HSFB2a(2) -------ANAC58     <---------TOE2(3)       <-----------GT1 <---------MYB111(2) <---------------AGL15   ccttgcaaattaccctttgctaatgtttgctttcttacaaatattaaactatctcgatccacctaccaaaaaggctcatagcctttactagaataaaaaa  1552700                          <---------AHL20(2)                         --------->AHL20(1)                         <---------AHL20(1)                         --------->ARR11(3)                         <---------ARR11(3)                      <---------DAG2                         <---------AHL20(2)                      <----------DOF2                         --------->AHL20(2)      --------->AHL20(2)               <---------MYB52(1)               <---------ARR11(3)                            <------ -------->GT1<---------ANAC46                   --------->AHL20(1)                         ---------- ----->DAG2  <---------ANAC58                   <---------AHL20(1)                       ----------->GT1 ----->DOF2  <---------ANAC58       >>>>>>>>>>>>>>>>>LFY   --------------->AtSPL8  ---------->DOF2   aagtgaatatcaatttcgtttgtataatatatttgagaacccattgtcaatatatatactctgagtactttatctcacatgtaaacaaagaaggtgataa  1552800                                       <---------YAB1                                              --                                    --------->ICU4                                            -------                               ----------->GT1                      --------->AHL20(2)        <------ ---YAB1                      --------->DAG2                        <---------AHL20(2)      <-------- ->GT1     <-----------GT1   ---------->DOF2<---------STY1(2) ----------->RAV1(1) --------->AHL20(2)   atgatatatcatttttcatgtttctaactaataaagtgattatgctagctatatgtataatgtgcaacaaaaaattaagagaaaaaaaatagtcatctac  1552900                                                    <---------ZAT2        <---------AHL20(2)                          --------->At4g35610       --------->AHL20(2)                           --------->ZAT2 --------->ANAC58           <--------HAHB4 <---------ARR14(2) --------->ANAC58           --------->ATHB12        <---------At4g35610   <---------TOE2(3) -------->DOF2              <---------ICU4 <---------ARR11(3)            --------->YAB1 -------->AGL15            --------->ICU4  --------->ARR14(2)         --------->YAB1      ---------->DOF2 ---------AGL15            <---------ATHB12--------->GLK1(2)         <---------YAB1  --------->AtLEC2 -At4g35610              --------->YAB1--------->YAB1             ---------->ID1<-----------GT1     -   ttaaagcaattttatagaatgccatactaatcatttatcaaacaaaatctgttcagctctgatgttttgttgttataatgtttcactatgcaaaaagaaa  1553000  Previous    Next  AGI:  At1g05310.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G36710.1); similar to Pectinesterase [Medicago truncatula] (GB:ABN08648.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 1550542    to: 1552516    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version