Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------ARR11(3)                    <---------ARR14(2)                    --------->GLK1(2)                    --------->ARR11(3)                    --------->ARR14(2)                  <---------HSFC1(2)             --------->LBD16            <---------LBD16           <---------LBD16                         --------->CCA1(2)          ------->TEIL                            <---------ARR14(2)       ----------->HVH21                          <---------ARR11(3)      --------------->AGL15                       --------->ARR11(3)      --------->TOE2(3)                           --------->ARR14(2)      --------->TOE1(3)                         ----------->ARR10                      --------->ANAC58     ----------------->AGL1                    <------ZmHOX2a(1)                       --------->ANAC58     <---------ANAC55(2)                   <------ZmHOX2a(1)   <---------AtMYB61  --------->ANAC58  -     ----------->RAV1(2)               --------->LBD16  --------->GLK1(2)         --------->ANAC58  -     <-----------------AGL1          <---------LBD16 <---------YAB1            <------NtERF2        -   <-----------GT1--------->HSFC1(2)--------->MYB52(1)  ------->TEIL        --------->RAP2.6(3)------   ctaaattacctgaaccgggaagtatcttgggaaacacaaaccggaggaaggagatatgaatctgtgtggttttgagaagacggcaagggacgctcaacaa  1537100                                                                 --------->ARR11(3)                                                             --------->O2                                                        --------->ANAC46                                                      <---------ALFIN1                                                     <-------TEIL<---------ARR11(3)                                                     --------->ZAT18                                                     --------->ZAT14                                                  <---------ANAC58                                          <---------GLK1(2)  --------->ANAC58                                          --------->ARR14(2) --------->ANAC58                                          <---------ARR14(2) <---------O2                                       --------->ANAC55(2)  ------>NtERF2    ------>NtERF2                     <---------TOE1(3) --------->bZIP60(2)   --------->DEAR3(1)                 <---------TOE2(3) --------->ANAC58 -------->ANAC58                     --------->MYB52(1) --------->ANAC58        <---------ARR14(2) -------->ANAC58                  --------->TOE1(3)  <---------ZAT18            --------->ARR14(2) -------->ANAC46              ---------->DOF2     <---------ANAC46 ------>ZmHOX2a(2) ---->DOF2                   --------->AtMYB61    <---------ANAC58<------ZmHOX2a(2)  ---------->DOF2   agacgcagcctctcattttctgagcatcccaccaaagcttaacgtattctctacgtgcacgccacgagatcgcgcttgagcctatcccaaagacgatgtg  1537200                        <---------ARR11(3)                        --------->ARR11(3)                     <---------WOX13(1)                                                      <------ZmHOX2a(1)         --------->ETT(1)                                          <<<<<<<<<RAP2.2------>NtERF2      <-----------RAV1(1) ------>ZmHOX2a(2)       <---------AtLEC2<---------TOE2(3)  <------NtERF2<--   ctcgatttttgtcgggctctgagattgatcttgatcagaagatgagaagtatgcatgaatagagtttttagattgaagtcttgaggccgagatgaggagg  1537300                                                 --------->ANAC58                                                 --------->ANAC58                                                 <---------YAB1                                             <-----------HVH21                                             <-----------TGA1                                            --------->ANAC46    ------>MYB46(1)                         --------->bZIP60(2)                     <---------HSFB2a(2)    ------>MYB83                          --------->ANAC55(2)            --------->YAB1 <---------O2   ----------->RAV1(1)                    --------->ANAC46               --------->AHL20(2)  --------->AtMYB61 --------->DAG2     <---------SPL7            <----------ID1     --------->HSFB2a(2) -------ETT(2)     ---------->DOF2 <-----------GT1           >>>>>>>>>TBF1  <---------AHL20(1)   tagaccaacaaaatgaatacaaaaagtagtatgcagtttaccatacgcgtcacgatagtcgaagaagaagacgaataatatgttttcgagacgggtcgaa  1537400                                                                      <---------------AGL15                                                                      <---------AHL20(2)                                                              <---------ZAT14                                                              <---------ZAT18                                                              --------->ZAT18                                                              --------->ZAT14                                                       ==================================HOX2a_HOX2a                                                       ------>ZmHOX2a(2)            <---------DEAR3(1)                                                      ===================================HOX2a_HOX2a                                                      <------ZmHOX2a(2)            <---------ORA47(1)                                                     <---------ARR14(2)           <------ZmHOX2a(1)                                                     <---------AGP1   --------->AHL20(2)------>NtERF2                                                     <---------ARR11(3)          ----------->HVH21                                                     <---------ARR14(3)          <------MYB83 -------                                                     --------->ARR14(3)          <------MYB46(1)-----                                                     --------->ARR14(2)          <---------SPL7 <----                                                   ----------->ARR10 <-----------------AGL3   <------                                           --------->ATHB12<---------ANAC46    <--------P<------NtERF2               <---------YAB1         <---------YAB1 --------->ARR11(3) <---------AHL20(2)    <------   atggaagacacatatttatgaaacagaacaaatttgggttataaatgagtggaaagatcttaagtggactatatatatatggtaggacggtggcaatata  1537500                               ----------->GT1                          --------->ALFIN1                         <------ZmHOX2a(1)                        *TSS<------ZmHOX2a(1)                       --------->ALFIN1                      <------NtERF2                      --------->ATERF1(1)                    <---------ANAC46                    <---------DEAR3(1)                    --------->ALFIN1                   --------->ATERF1(1)                   <---------LBD16                   <------NtERF2 <--------P                  <---------RAP2.3(1)                                                       <-------- ---------->DOF2 --------->DEAR3(1)                                                       <---------TOE2(3) -->AHL20(1)     <---------RAP2.3(2)                                                    <---------AHL20(2) ---->AHL20(1)   <---------DEAR3(1)                                                 <------ZmHOX2a(1) -----AHL20(1)  --------->At4g35610                                               --------->ANAC58 ---AHL20(1)    <---------At4g35610                         ----------->GT1       --------->ANAC58 <- ---ARR11(3) <---------At4g35610<-------GAMYB   ------------>CBF              <---------ZAT6<--------   tattaaagtgtttgtagcagcggcggaggaggagggttgatcagagggagagcaatggagtcatgttaaaaatggttttagtgtaaggaattaatgctga  1537600                                               <---------ANAC58                                               ----------->GT1                                   <---------ANAC55(2)                                   --------->ANAC55(1)                                   --------->ANAC58                         <---------YAB1                                   --------->ANAC58                       --------->YAB1                                   --------->ANAC46                   <---------AHL20(1)           <-                                  <---------LBD16     ---------->DOF2 --------->AHL20(1)    <--------         --------->AHL20(2)   --------->MYB59  <---------ANAC46       --------->AHL20(2)    <-------- -At4g35610              <---------YAB1        <---------ANAC58       <---------AHL20(2)    <-------- --------ZAT14       <------------CBF   <---------At4g35610          --------->AHL20(2)--------->ANAC55(2) -ICU4 ----------->GT1 ----------->GT1  --------->At4g35610  <------ZmHOX2a(1)         <---------ANAC55(2)   ctaaactatatgtaaataactagtattgtgattaggcacggaagctaaggcgtaaataaagaaggagtctaataaattatactagtaatacgtttcttgt  1537700                                                      --------->AHL20(1)                                                     <---------------AGL15                                                     <---------CCA1(2)                               --------->TOE2(3)    <-----------------AG                       --------------->AtSPL8       <-----------------AGL3                       --------------->AtSPL3    <---------ANAC58                       <---------------AtSPL8    <---------ANAC46                  <---------TOE2(3)              <---------ANAC58                 ---------->DOF2      --------->ATHB12<---------AHL20(1)                <---------AHL20(2)   --------->AHL20(1)     <------MYB83                     <-------            <---------------AGL15    --------->AHL20(2)     <------MYB46(1)          <-------MYC3       <---------AHL20(2)  ------->TEIL      <---------At4g35610     --------->GLK1(2)       -------- ---------DOF2  --------->AHL20(2)   <---------AHL20(1)    --------->MYB59           ------->MYC3 -ANAC46    --------------->AGL15    <---------AHL20(2)<---------AHL20(2)           --------->O2 -ANAC58    =========================================================MADS_MADS      <---------O2 -ANAC58 <-----------GT1   <-------TEIL      <---------GLK1(1) ---------->DOF2 --------->ANAC46   ---   actttgtattttttcaaattaaagtaatgtacatcttaattaattggagatgcttatatatttggtaaaggaatctattactcgacacatgtcaaattat  1537800                                               --------->DAG2                              --------->AHL20(2)                    --------->ZAT6                          --------->AHL20(2)  ---------->DOF2      <---------TOE2(3)         -------- --ATHB51                 --------->YAB1  --------->ANAC46        <-----------GT1    <---------ANAC55(2) ->AHL20(2)            --------->YAB1     <----------ID1     <---------YAB1          --------->ANAC55(2) ------>TOE2(3)  --------->AtLEC2   --------->TOE2(3)        <---------AHL20(2)    <-----------GT1   tctcaattcacttagttccatacaacaataaaaaaaattcttaaacgaaaaagcgagtttttttttattaacaatagagacatttttacttaacaaaaag  1537900                        <---------AHL20(2)                       <---------AHL20(2)                       --------->AHL20(2)                  <---------DAG2                  <---------AHL20(2)                       <----------DOF2                 --------->AHL20(2)                     --------------->AGL15                 <---------AHL20(2)                     <---------------AGL15                     <--            <---------MYB52(1)                         <-----------------AGL3             <-------TEIL          ------>ZmHOX2a(2)                            <-----------------AGL1         --------->ANAC58         <------ZmHOX2a(2)                             <-----------------AGL2         --------->ANAC58        <---------ARR11(3)                     <---------GLK1(1)     <---------AHL20(2)  --------->CCA1(2) -->DOF2--------->ARR11(3)          --------->YAB1 <----------DOF2   --------->AHL20(2) <---------ARR11(3)   aaacaatagagatcgttttttaaattttaattttgccataacaatatagaattcttttctacttttggtcattaattagcaagaatgcaagatacatgtt  1538000  Previous    Next  AGI:  At1g05280.1    Description:  fringe-related protein. similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT4G15240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24168.1); contains InterPro domain Protein of unknown function DUF604 (InterPro:IPR006740) Range:  from: 1535443    to: 1537524    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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