Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------DAG2          --------->AHL20(2)        <----------DOF2          <---------AHL20(2)--------->ZAT6                                    <<<<<<<<<TBF1      <--- ------>ANAC58           --------->AHL20(2)                          --------->ETT(2)      <---------AHL20(2) ------>ANAC58           <---------AHL20(2)                          <---------ZAT18   ----------->GT1 ------>ANAC46          --------->AHL20(2)                <----------DOF2<---------GLK1(2) --------->AHL20(2)   actccaagaagattaattagtctaaaattaatactaaactttttcttatcaatttctcttctttttttttgtccacattcttcttcaagttgtttaattt  1490500                                                           <-----------GT1                            --------->ARR14(2)           --------->ICU4       ----------->GT1                <-----------GT1                     --------->ANAC58    <------ZmHOX2a(2)          --------->TOE2(3) <---------ARR14(2)      --------->ANAC58    =============================          --------->TOE1(3) --------->GLK1(2)       --------->ANAC46   <---------ARR11(3)      ---------->DOF2      --------->RVE1(1)        ----------->GT1    --------->ARR11(3)           - ------YAB1     --------->YAB1   <---------MYB52(1)------->TEIL   <---------ANAC55(2)       <--------   tgatcagttaaagcttaattacaactaaaaaatccgttgattcgacctctctgaacgtaattttcaatacgtagatcaacaagtgaatttcactaagttt  1490600       <---------HSFC1(2)       --------->HSFC1(2)       --------->HSFB2a(1)       <---------HSFB2a(1)  --------->LBD16  <---------------AtSPL8                  ----------->RAV1(1)  ------>ZmHOX2a(1)<---------------AtSPL3              --------->MYB46(3)  <---------HSFB2a(2)  --------->SPL7                 ------>MYB83  --------->HSFB2a(2)<---------SPL7                   ------>MYB46(1)                             <-- <---------LBD16   --------------->AtSPL8 --------->ARR14(2)                                     <--- ========HOX2a_HOX2a--------->ALFIN1      <---------ARR14(2)                             ------->MYC3 ----->ZmHOX2a(2) <---------ANAC46 --------->ZAT6    ----------->RAV1(1)                 <-------MYC3 -TOE2(3)  <---------YAB1       --------->ZAT14     --------->AtMYB61--------->YAB1   <---------ALFIN1   gatcctggaaatttcgattagggtgtacgactacttcacactcggattcagacaccaacaacaacaaaaaatcaaaactttggtagacacacatggagag  1490700                                                                            --------->TOE1(2)                                       --------->ANAC58                   --------->ARR14(2)                                       --------->ANAC58                   --------->GLK1(2)                                      --------->DAG2                     <---------ARR14(2)           ---------->DOF2           ---------->DOF2                     --------->ARR14(2)       ----------->GT1           <---------TOE2(3)                     ----------->ARR10      --------->DAG2             <---------YAB1                 <---------WRKY18(1)     ---------->DOF2     --------->TOE1(3)                     --------->WRKY12 -------ARR14(2)         --------->TOE2(3)                     ----------->HVH21 ---ZmHOX2a(1)         <---------ARR11(3)                    --------->O2<---------GLK1(2)   gaatcgataaagtaaaagagaaccagaccttaattaagataaagcaatgagagagaagagaccacttgaccctcagattctgcgaatggctcaataaact  1490800                    <-----------------AGL1                    ----------------->AGL1                                               <-----------RAV1(2)                   <---------At5g28300                                                  <------NtERF2                  <-----------GT1                                                 <---------ANAC58              <------NtERF2                                                    <----------DOF2            <---------DEAR3(1)                                               --------->ZAT2--------->At4g35610          <-----------HVH21                                                  --------->At4g35610  <---------HSFB2a(2)                                           <---------ANAC46  <---------ANAC58  --------->HSFB2a(2)                   <---------ARR11(3)   <----------DOF2 <---------At4g35610   ggttccagtactcgtcggagttaccatcttcggcatcaccaagttctctcacaagggtttcgactttcgagtaagaagcagctttcgggcctcagacgac  1490900                                              *TSS ------>MYB46(1)                                       ----------->HVH21                                     --------->O2  ------>MYB83                                     <---------O2 ----------->RAV1(1)                                     --------->ANAC55(2)                                     <---------ANAC55(2)                        <----------DOF2                                     ================================bZIP_DOF <---------TOE1(2)  <---                                ----------->HVH21--------->AtMYB61    <---------DAG2             <---                   ============================bZIP_DOF   ---------->DOF2    ------>ZmHOX2a(1)<------                   ---------->DOF2   --------->TGA1a--------->MYB46(3)<----------DOF2 <---------TOE1(2)   cgaaacccaaaccaatagaaccaaagtgtctgttttgacatgtgaccaagaccaacaaataaaagtctctaactttatcctactttcccaagttttatac  1491000                                                               ----------->GT1                                                   --------->ATHB12                                                  <---------ATHB12                                                  <---------YAB1                                          <---------ZAT18--------->HSFB2a(2)                                       <---------At5g28300--------->LBD16                                     --------->ZAT14 --------->GLK1(1)             --------->GLK1(1)  ---------->DOF2               <---------At5g28300<---------ICU4                  <---------GLK1(1) ------------AGL15             <-----------GT1    --------->ICU4             --------->ARR14(2) -------DOF2              <---------TOE2(3) ------>NtERF2<---------HSFB2a(2) <---------ARR14(2) -----GT1          <------------CBF  <---------ZAT14 <---------GLK1(1)       --------->GLK1(2)   ttttcaaagtaattttagagacattgttaagttttacagtttactgcgcctaatgatttccagagaggttattacacagtatccgatttctgtctatgca  1491100                                                                                  --------->ANAC46                                                                                 --------->MYB46(3)                   --------->GLK1(2)                                           ------>NtERF2              ---------->DOF2                                                 --------->DEAR3(1)   <-           ------>ZmHOX2a(2)                                               --------->ANAC58       ---          <------ZmHOX2a(2)                                                --------->ANAC46       <--         ------->TEIL                                                      --------->ANAC58 ---------         <---------ARR14(2)                 <---------TOE2(3)   <---------ANAC58--------->ANAC58  <--         --------->ARR14(2)    <---------ZAT6----------->GT1    <---------ANAC58--------->ANAC58  ---   atagttttatggatccaaaagaatcagggcatagtgttttgtatttgatgtaaaaatccacaagttgcttcattttcaagccacccaaaacgaacaaagc  1491200                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                         <---------ARR14(2)                                                                         --------->GLK1(2)                                                                         <-----------ARR10        --------->ZAT18                                       --------->ANAC46        --------->ZAT14                                       --------->ANAC55(2)     --------->ALFIN1                            ----------->RAV1(1)  <---------ANAC58 ----------RAV1(2)                            --------->ANAC46--------->ANAC58 ------>ZAT2 --------->ZAT14               --------->ARR14(2) --------->ANAC58 -------ZAT2 <---------ZAT14      ----------------->AGL1   --------->ARR14(2) ->DOF2 <---------ZAT14      ------>ZmHOX2a(1)--------->ANAC58<---------ANAC55(2) -------At4g35610           --------->TOE2(3) --------->ANAC58--------->ANAC55(1)                  -- ------>At4g35610<---------ZAT6  <-----------------AGL1--------->YAB1 <---------ANAC58    <----------   agcaggggtgttcactgtagtgttcagtttccttataccaaaatggaaacgccacaatcacaatacgcaattgcgattcttgccagaggttttcacactt  1491300                                                                                      <---------At4g35610                                                                                   ------>MYB83    <-                                                                      --------->ARR14(2)          <--                                                     <---------ARR11(3)     --------->SPL7   <-------                                             --------->DAG2           --------->ARR11(3)  --------->ARR11(3)            ------>ZmHOX2a(1)       <---------ATHB12 --------->ARR11(3)  <---------HSFB2a(2)------>ZmHOX2a(2)          ----------->RAV1(2)       <---------YAB1  <---------GLK1(1) <---------ARR14(2)  <---------ARR11(3)        ------>ZmHOX2a(1)        --------->TOE1(2)  <---------CCA1(2)<---------GLK1(1)------>ZmHOX2a(1) ------->ZAT6                    --------->TOE2(2)  --------->GLK1(1)<---------CCA1(2)=============HOX2a_HOX2a -GT1 <---------ICU4           ------->TEIL ---------->DOF2      ----------->GT1   ------>MYB46(1)---   atctctaatccttcctgcctcttctattctatgtacctatgaatacaaaagtggatatctcttggaattgtatatctggacgaccttcctctgatctttg  1491400  Previous    Next  AGI:  At1g05160.1    Description:  CYP88A3 (ENT-KAURENOIC ACID HYDROXYLASE 1); oxygen binding. Identical to Ent-kaurenoic acid oxidase 1 (KAO1) [Arabidopsis Thaliana] (GB:O23051;GB:Q9C5Y3); similar to KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G32440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70436.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70435.1); similar to ent-kaurenoic acid oxidase [Cucurbita maxima] (GB:AAG41777.1); contains InterPro domain Cytochrome P450, B-class; (InterPro:IPR002397); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 1487377    to: 1490946    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05170.1    Description:  galactosyltransferase family protein. similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT2G32430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23998.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) Range:  from: 1491110    to: 1494247    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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