Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------------AGL15                                                              =======================================                                                              ----------------->AG                                                              <-----------------AG                ---                                                       <---------MYB52(1)                        ----                                                      <-------GAMYB                              >>>>                                                     <---------MYB46(3)      --------->At5g28300 ----                                                     <---------ZAT6         ----------->GT1--------->AHL20(2)                                         --------->ANAC46     <-----------------AGL1       <---------YAB1         --------->HSFB2a(2)           <---------MYB52(2)     <-----------------AGL3       <---------AHL20(2)         <---------HSFB2a(2)    ----------->GT1  --------->MYB46(3)      ----------->RAV1(1)   <-----   agattaatcttctggtatagaaatcaaactaggccagtgaaacaaacaacaacgactgttacttcacaaatttggcaacagtgaattggctatattatta  1441000                                                                                                 ----                                                                  ------>MYB46(1)           <--------                                           <-------TEIL           ------>MYB83             --------->LBD16 ==============MADS_MADS             --------->At4g35610        ------->GAMYB --------->LBD16   ----- ------>MYB46(3)----------->GT1      <---------At4g35610        --------->AtMYB61         <---------DEAR3(1) ------------->AG                   --------->MYB52(1)         --------->MYB46(3)        <---------LBD16 >>>>>>>>>>>>>LFY                --------->ANAC58    --------->DAG2         <---------At4g35610 <---- ------------->AGL1              --------->ANAC46   ---------->DOF2         <---------LBD16------>NtERF2 ------GT1  ---------->DOF2      --------->ANAC58 <------ZmHOX2a(1)         --------->At4g35610<-----   cccaatgtgataaccaaagagaaaattggccatagaagcaactgatacatgaggaaaagccgataaccatcccaaatcagcggagaatttctccggcgga  1441100                     --------->At4g35610      <---------ARR11(3)      --------->ARR11(3)     --------->GLK1(1)     --------->AHL20(2)     <---------GLK1(1) ----------->GT1 ----->ZAT2          <---------At4g35610                                            <--------P -LBD16   --------->ANAC55(2)                                                     <------MYB83 ---->ARR14(2)   <-----------HVH21      --------->DAG2                   ---------->DOF2 <---------WRKY12 -----ARR14(2)  ------>ZmHOX2a(2)      ---------->DOF2            --------->ATHB12<------MYB46(1) -NtERF2  <---------ANAC55(2)     <---------YAB1           ----------->GT1      <---------WOX13(1)   actggcgatatctcgtgatcgtcatctgttaaaattttgaataaagttagaatatttcaaacagataaacattggcaaagagattggtaagtcaatggag  1441200                                                                             --------->DAG2                                                                            ---------->DOF2                                                                     --------->CCA1(2)                                        ------->GAMYB             --------->ANAC58          ------->TEIL            <---------ANAC58                --------->ANAC58                 <-     --------->At4g35610          <---------ANAC58   <----------DOF2 --------->MYB52(1)            --     <---------At4g35610 <---------ETT(2)          ------>ZmHOX2a(1)--------->ARR11(1)            ---  ---------->DOF2        --------->ETT(2)--------->ANAC46       ---------->DOF2         <----------DOF2   gtgagaaagctgaacctggtttcttcgtcgacaatgtcgtaacccgcttcttcctctttgaagaccgaaagaaacgggaaaaggaagaggctttacgaga  1441300                        ----------->GT1                       --------->DAG2                                       <---------ALFIN1             <---------MYB46(3)                                             ----------->RAV1(1)            <---------ANAC46                                          <-----------TGA1          <-----------HVH21                                           <-----------HVH21        <---------DEAR3(2)                                           --------->ANAC46  <---------ANAC58   ---------->DOF2                       <---------SPL7  --------->MYB46(3)  <---------ANAC58--------->ANAC58                       <---------------AtSPL8 --------DEAR3(1) --------->ANAC58                       --------------->AtSPL3 ------->ZAT18  <--------P                   --------->MYB59      --------->ARR14(2)------>ZmHOX2a(2) ------>ALFIN1----------->GT1      <-------TEIL          <---------------AtSPL3  --------->ATHB12   gtgggcgagtcgggtcgggtaagaaaaggttaatcggttcatagaattgggtcgatatagaagtacggtattcgtcacccacatgatcggagagctagac  1441400                                                                                         <-------MYC2                                                                                         ------->MYC2                                                                                         <-------PIF4                                                                                         <-------MYC3                                                                                         ------->PIF4                                                                                         ------->MYC3                                                                                        <---------O2                                                                                        <---------TGA1a                                                                                        --------->TGA1a                                                                                        <---------ANAC55(2)                                                                                        <---------ANAC58                                                                                        --------->ANAC55(2)                                                                                        --------->O2                                                                                        <---------ANAC58                                                                                        =============                                                                                       ------------>OsbHLH66                                                                                      <------------OsbHLH66                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                               ----------->HVH21                                                                              <-------MYC3                                                                              <-------PIF4                                                                              ------->MYC3                                                                              <-------MYC2                                                                              ------->MYC4                                                                              ------->MYC2                                                                              <-------MYC4                                                                              <-------PIF5                                                                              ------->PIF4                                                                              ------->PIF5                                                                             =====================bZIP_bZIP                                                      ----------->GT1        --------->bZIP60(2)                                                     --------->ANAC58        ========================                                                     <---------ANAC46        <---------O2------->PIF5                                                     --------->ANAC58        --------->ANAC58                                                   ------>NtERF2             --------->O2<-------PIF5                                 --------->YAB1   --------->DEAR3(1)         --------->TGA1a                       <---------------------WRI1 <---------DEAR3(1)         <---------TGA1a                       <------NtERF2   --------->AHL20(2)                    --------->ANAC58                      <---------DEAR3(2)<---------AHL20(2)                   --------->ANAC46                      ------>NtERF2    <---------AHL20(1)    --------->YAB1  <---------ANAC55(2)                *TSS <---------DEAR3(1)<---------AHL20(2)  --------->AHL20(2)--------->ANAC55(2) --------->ANAC58  <-----------HVH21--------->YAB1----------->HVH21        <------------OsbHLH66 --------->ANAC46 --------->ANAC46--------->AHL20(2)<------NtERF2        --------->ANAC58------->MYC4 --------->ANAC58<-------TEIL----------->GT1     --------->ATERF1(1)     --------->ANAC58<-------MYC4   tagacggaagagagagaaatacgtcggcgaagcgaaaataataaaatttgaggcgacggaaaataataaacttgtaagcacgtgacactcacgtgctcaa  1441500                                                                           xxxxxxxxxxxxxxxx>smallRNA(i)                                                                           <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           --------------->AGL15                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                           <---------------AGL15                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                           xxxxxxxxxxxxxxxx>smallRNA(i)                                                          <-----------------AGL1                                                          ----------------->AGL1                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          ----------------->AG                             <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                            <-----------------AGL1        ----------------->AGL2                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    <------ZmHOX2a(1)                     ===========================================                  <---------TOE2(3)                       <-----------------AGL2             <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            ================================================================MADS_MADS            <---------------AGL15                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            --------------->AGL15                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <-----------------AGL3                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           ----------------->AG                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           ----------------->AGL1                    --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)           <-----------------AGL1                    <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <-----------------AGL2                   --------->AHL20(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           ----------------->AGL3                xxxxxxxxxxxxxxxx>smallRNA(i)           <-----------------AG             --------->HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           =================================================================MADS_MADS           ================================================================MADS_MADS        --------->GLK1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        <---------GLK1(1)----------->HVH21  <---------HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------WOX13(1) ----------->GT1   <----------DOF2<-----------GT1<----------DOF2      <-------- =======================bZIP_DOF         <---------DAG2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <-- =======================bZIP_DOF         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->CCA1(2)  <--   atactgagtgatttcctttttaggaatgtgacaagtttaggcacttttagaaaattttattccatttgaggcactttgcagagatgaggcattttttcaa  1441600                                                                                           xxxxxxxxxx                                                                                         --------->MYB55(2)                                                                                         <---------MYB46(3)                                                                                       <---------MYB52(1)                                                                                       <xxxxxxxxxxxxx                                                                                      <-------GAMYB                                                                                     <---------MYB46(3)                                                                                     --------->MYB52(2)                                                                                     --------->MYB55(2)                                                                                     <---------DEAR3(1)                                                                                     <xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <------MYB46(1)                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 <---------MYB46(3)                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                             --------->ATHB12                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                            <---------YAB1<---------AtLEC2                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <------MYB83 --------->ALFIN1                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 ----------->GT1               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                          --------------->AGL15                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          <---------------AGL15        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) =========================================MADS_MADS    <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---GT1    <---------AHL20(2)   --------->DAG2         <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------DOF2       --------->ARR14(2)   ----------->GT1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   -- -------DAG2  <---------YAB1   ---------->DOF2    <----------DOF2  <------MYB46(1)<------MYB83     <-   ctttttcatcgaatttatgacaaatttgcccctaaaagtgaaaacgaaaatactttagcgtttggaagttggtatatgatgagtgggtcgttggatggaa  1441700           --------->YAB1        --------->YAB1       <---------YAB1    --------->ICU4  <-----------GT1 xxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxsmallRNA(fl3) xxxxxxsmallRNA(se3) >smallRNA(i) xxxxx>smallRNA(se3)                                   --------->KAN4(2) xxxxxx>smallRNA(si3)        <---------AHL20(2)       <---------KAN4(1) xxxxx>smallRNA(se3)         --------->AHL20(2)       --------->KAN4(1) xxxx>smallRNA(le3)         --------->AHL20(2)       ------->TEIL                  xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxsmallRNA(fl3)         <---------AHL20(2)    <---------YAB1               <-----------GT1 xxx>smallRNA(le3)          <---------AHL20(1)    --------->ICU4          <---------DAG2 xx>smallRNA(si3)       --------->AHL20(2)      --------->YAB1         ---------->ID1 >smallRNA(si3)         <---------AHL20(2) ----------->GT1             <-----------GT1---------->ID1 >smallRNA(i2)      <---------AHL20(2)    --------->DAG2              <------------------------ANAC81 >smallRNA(le3)     --------->AHL20(2)   ---------->DOF2            --------------->AtSPL8 --------->GT1<---------GLK1(2)     <---------------AGL15      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------REM1(1)--------->AHL20(2)  --------------->AGL15  <----------DOF2<----------DOF2   gttgtaactattatcagattatatatataatttaattactcaaaaaagtataatgaatattctttctctatttgtactttttttcttcgtcttcttcatc  1441800                                                                                     --------->TOE1(2)                                                                                    --------->YAB1 <x                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                        --------->AtLEC2         <xxx                                        <<<<<<<<<GATA-1               <---------ANAC58           <xxx                                    <----------DOF2                   <---------ANAC58        <------          <-----------GT1       <----------DOF2           <----------DOF2   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <----------DOF2      <----------DOF2      <----------DOF2   <----------DOF2  <xxxxxxxxxxxxxxxxx   gtctacttcttttttcttcatcgactcttcttttctttctttatctatctctttcttcatctttcagtctttccttgcaaaatcaaacatgagagacttt  1441900  Previous    Next  AGI:  At1g05030.1    Description:  hexose transporter, putative. Identical to Probable plastidic glucose transporter 1 [Arabidopsis Thaliana] (GB:Q0WVE9;GB:Q5XF02;GB:Q9ZVN7); similar to GLT1/PGLCT (GLUCOSE TRANSPORTER 1), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT5G16150.2); similar to GLT1/PGLCT (GLUCOSE TRANSPORTER 1), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT5G16150.3); similar to GLT1/PGLCT (GLUCOSE TRANSPORTER 1), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT5G16150.1); similar to unnamed protein produc Range:  from: 1438151    to: 1441416    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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