Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------NtERF2                              ------>NtERF2                              <---------At5g28300                             --------->DEAR3(1)                            --------->MYB46(3)                          --------->ANAC58                          --------->ANAC46                          --------->ANAC58                       <------NtERF2                      ------>NtERF2                   <-----------HVH21                   --------->REM1(2)                  --------->ALFIN1   --------->AHL20(2)<---------ETT(2)                   <----------DOF2 --->GLK1(2)     --------->LBD16              <---------ICU4 -->ARR14(2)    <---------ANAC58              --------->YAB1                                    ----- ---ARR14(2)    <---------ANAC58 --------->LBD16<---------YAB1                               -------- ---GLK1(2)     <---------ANAC55(2)          <---------ATHB51                              <---------At5g28300 -->ARR11(3)    <---------ANAC55(1)          <---------ATHB12                             <---------- ---ARR11(3)    <---------ANAC46--------->DEAR3(1)     <---------DAG2  --------->TOE2(3)<---------WOX13(1) -->ARR10       --------->ANAC55(2)          --------->ICU4     <----------DOF2    <----------DOF2 --   ctcgattaattctctgttccgtgtcgccaagccaccgcgagagaccaattatgacacccttttgccctttagacctcaattttagctttgatttaccaca  1410800                                     <---------HSFB2a(1)                                     --------->At4g35610                                     --------->ZAT2                                     <---------HSFC1(2)                                     --------->HSFC1(2)                                     <---------At4g35610                                     --------->HSFB2a(1)                                  --------->LBD16                                 --------->LBD16        <----------DOF2          --------->ANAC46                                                  <- ----->DOF2                     --------->LBD16                                             <-------- ------->AGL15                 <---------LBD16 --------->AHL20(2)                        --------->ANAC46 -GT1<-----------GT1        -------->P         <---------AHL20(2)  *TSS                  --------->ZAT6 ------->YAB1              <-----------GT1    --------->YAB1     ------>ZmHOX2a(1)     <-----------GT1   aagataaatacttttcaaaacttatgttcttacccccgaagcttccaattttaatcgaactattgtccttagacacatattagaatatttaacaccactt  1410900                                                                                                <----                                                                  --------->ZAT18           ---------                              ----------->GT1                     <---------ZAT18          <---------YAB1                        <---------------AtSPL8      <-----------TBP                      <----------DOF2                  --------->TOE2(3)         <---------ANAC55(2)  <-----------GT1   <----------DOF2       <-------TEIL     --------------->AtSPL8     ------->TEIL<------------CBF  <---------At4g35610 --------At4g35610--------->TOE1(3)       --------->AHL20(2) <---------YAB1      --------->At4g35610 -ALFIN1         ----------->GT1     ------------>CBF      <----------DOF2   --------->AtMYB61<------   gagcttatatacatatcaaacgttaatatgtacagtatatacaattacatatgtatttatacttttattgccctatagacctcagctttagctttgattg  1411000                          --------->ANAC55(2)                 <-----------GT1                                        ------------>CBF            <---------AHL20(1)                                         --------->ANAC58            --------->AHL20(1)                                    <-----------RAV1(2)            <---------AHL20(2)                                   <---------LBD16          <---------TOE2(3)       --------->ANAC58              --------------->AGL15         --------->AHL20(2)       --------->ANAC58             <-----------------AGL1      --------->TOE2(3)  <-----------------------TaNAC69(2)<---------GLK1(2)--------->AtLEC2       <- -----WRKY18(1)<---------AHL20(2) --------->ANAC46      --------->YAB1 --------->ANAC58       ------- >ATHB12 --------->YAB1<---------AHL20(2)<---------ALFIN1 --------->At4g35610                <------- ---WOX13(1)--------->AHL20(2)  <-----------GT1 <----------DOF2<-----------------AG          <-------   accagaaacattaatattttaacaatttatgtattcaccccaaacacttccttttgaatcagattaccccagaaggcaatgcaaatcgaatgactaaggt  1411100                                      --------->ZAT14                               --------->ANAC46                               <---------ANAC55(2)                               --------->ANAC55(2)                               --------->ANAC55(1) --------YAB1          --------->ANAC46 ---->GT1        --------->YAB1--------->ANAC58                                                  <--- --TOE2(3)      <---------ATHB12      <---------ZAT14                             --------->AtMYB61 --TOE1(3)  ------------>CBF   --------->ANAC58 <-----------GT1      *TSS--------->CCA1(2)  ---------   tattttagacatttctcaataatccaaaccattacgcaacttcactgtattaacctgttttcttcatcgaagaagatagagagaccaaaacaaaaaaagc  1411200                <---------MYB46(3)                <-----------RAV1(1)        --------->LBD16        ------>NtERF2       --------->ANAC58       --------->ANAC46      <---------LBD16    <---------ARR14(2)    --------->KAN4(2)    --------->ARR11(3)    --------->ARR14(2)    <---------ARR11(3)             <----------DOF2                                       <-------TEIL   <---------GLK1(1)         <----------DOF2                                     <---------ZAT14 -------DOF2   ------->TEIL <---------ANAC58                                     --------->ZAT14 ->DOF2--------->ANAC58     <---------ANAC58             <<<<<<<<<TBF1           <---------ABI4(2)   tttgaatatccgccatggatgttggacgatgctttctctttcttctattaccaagtttcttcttcttgccttcacaaacgcagagcaccgattcattcac  1411300                                                                                                  ---                                                                                             --------                                                                                        --------->LBD16                                                                                       <---------HSFB2a(2)                --------->MYB52(1)                                                 --------->GLK1(1)         --------->ARR14(2)                                                       <---------ARR14(2)         ------->TEIL                 --------->GLK1(2)                <-----------GT1<---------LBD16         <---------ARR11(1)           <---------ARR11(3)        <------NtERF2     --------->ARR14(2)         <---------ARR14(2)           --------->ARR11(3)      <---------ANAC46    <---------GLK1(2)        <---------CCA1(2)      --------->TOE2(3)    ---------->DOF2   --------->KAN4(2)--------->HSFB2a(2)   atcggttctcgtatctcaaaacggactcgatttcgtcaaaaatcttctagttaacaaagctatcgcgtcgattatacctctccagattcccagaattgag  1411400                                                                              <---------At4g35610                                                                         --------->bZIP60(1)                                                                         <---------bZIP60(1)                                                                         --------->ANAC55(2)                                                                         <---------ANAC46                  <---------ANAC58                       --------->CCA1(2)<-----------TGA1                  <---------ANAC58                     --------->CCA1(2) <---------ANAC58                  <---------ANAC46                  --------->ANAC46     <---------ANAC55(2)                  --------------------->WRI1        --------->ANAC58     <---------ANAC58    <------MYB83                 --------->MYB52(2)                 --------->ANAC58<---------bZIP60(2)      <------MYB46(1)         <---------ARR14(2)                   <-----------ARR10    <---------TOE2(3)    <---------TOE2(3)         --------->ARR14(2)                   ------->TEIL       ----------->HVH21      <---------TOE1(3)     --------->YAB1       <---------ARR14(2) <---------CCA1(2)  <----------DOF2    <---------YAB1---- ------>GLK1(1)<---------MYB52(1)            <---------GLK1(2) <---------ANAC58   <---------TOE1(2) --->GT1<---------GLK1(1)<------ZmHOX2a(1)--------->HSFB2a(2)  <---------ANAC58   <---------TOE2(2) <   aaatctatgaaaatcccgttccttggaggaatcgatgttgttgtctcgaatctcacgatatacgagcttgacgttgcgtcatcttatgttaagcttggtg  1411500                   <-----------HVH21                 <---------DEAR3(2)                                       <---------ANAC58 <---------ARR11(3)       <---------bZIP60(1)                                           <---------ANAC58      --------->ARR11(3)       --------->bZIP60(1)    <---------ANAC46                  --------->ZAT6    ------>ZmHOX2a(1)    --------->ALFIN1 <-----------RAV1(2)                      <-----------GT1  ------>ZmHOX2a(1) ------->HVH21<-----------HVH21 ----------->GT1           <---------YAB1  <---------ANAC58--------->CCA1(1) -----------RAV1(2)<----------DOF2                     --------->ICU4<---------ANAC58     --------->RVE1(1)   agacaggtgttgtcatcgtcgcttcagggacgacttgtaatttgagtatgaattggcattattcttacagtacttggcttcctcctattgaaatatctga  1411600                           --------->YAB1                          <---------YAB1                        -------->HAHB4                        <---------ICU4                        --------->YAB1                       <---------ATHB51                  ----------->GT1                  --------->ANAC55(2)                                                              <-                 <---------TOE2(3)                                                                 <-                 <---------TOE1(3)                                                       <---------ARR11(3)                <-----------RAV1(2)                                                      --------->ARR11(3)          <---------At4g35610       <-----------GT1                       --------->ATHB12     <-----         ------->TEIL  --------->ICU4                     --------->At4g35610   ---------->DOF2<-----     ----------------------->TaNAC69(2)     --------->TOE2(3)      ----------->GT1       <---------GLK1(2)   tcagggtattgcatctgttcaggtaattatgatcaattttactaattcttagttttgatcatctcaatcttgtgaatcaatggaaagacaagatttttct  1411700  Previous    Next  AGI:  At1g04960.1    Description:  similar to bZIP family transcription factor [Arabidopsis thaliana] (TAIR:AT1G27000.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73938.1); contains InterPro domain Protein of unknown function DUF1664 (InterPro:IPR012458) Range:  from: 1407800    to: 1410867    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g04970.1    Description:  lipid-binding serum glycoprotein family protein. similar to lipid-binding serum glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G20270.2); similar to lipid-binding serum glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G20270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24091.1); contains InterPro domain Lipid-binding serum glycoprotein; (InterPro:IPR001124) Range:  from: 1411169    to: 1413626    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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