Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                      --------->ARR14(2)                                                                       <---------ANAC58        <-----                                                        --------->ARR14(2)            <---------GLK1(2)                 --------->ZAT14                        <---------ARR14(2)            <---------ARR14(2)                 <---------ZAT14          ----------->GT1              <---------ANAC46      --------             <-----------GT1      --------->AtMYB61    <------ZmHOX2a(1)      <---------At4g35610   -            --------->ZAT14   ================================HOX2a_HOX2a     --------->At4g35610   < --->YAB1   <---------ZAT14   ------>ZmHOX2a(2)--------->ICU4          <---------ANAC58--------->GLK1(2)   aaattcgaatacatttcactgtagcaaattgatcgaccaaaaattagtaaatatgaaggacctgcttcttcttgcgagtgagatgccagattctccaaca  1395500          ------->GAMYB                                                ==============================         --------->MYB46(3)                                            ------>ZmHOX2a(2)        -------->P                <---------ANAC58                    <------ZmHOX2a(2)        ------>MYB46(1)  --------->ANAC46                             ===============================        ------>MYB83   <---------DOF5.7(2)                           --------->ARR14(2)   <-----------GT1    <-------TEIL<---------ANAC58                   <---------ARR11(3) ---------ARR14(2)   --------->DOF5.7(2)                             --------->ARR11(3)   --------->YAB1 ----ALFIN1        <---------ANAC58                           --------->LBD16           <-----------HVH21 --->RAV1(1)  <---------ZAT6      <---------ANAC46          <---------LBD16         ------>NtERF2   - -------->ARR14(2) <---------ANAC46             <----------DOF2      <---------ARR14(2)--------->ANAC46 ---------GLK1(2)  <---------ANAC58         --------->REM1(1) --------->At4g35610  --------->ANAC46--   catattctccaaccgagagttacgttcacgagaattgcgagtggctacaactttgagccaagtccggtgaagatcggtttcatcgacaccagtcacaact  1395600                                                                             <---------ANAC46                                                                         <---------ZAT2          <---                                                             <---------ANAC58<---------ANAC58    <---                                                             <---------ANAC58<---------ANAC58   <----                                                            --------->HSFC1(2)  <---------ARR14(2)                                                  <---------ARR14(2)     <---------At4g35610    -----                                                  --------->ARR14(2)     --------->ZAT2    ---------- ======HOX2a_HOX2a                                <---------GLK1(2)      --------->At4g35610<-------- ======HOX2a_HOX2a                --------->WOX13(1)<-------TEIL        <-----------RAV1(1)<---------LBD16 ----->ZmHOX2a(1)     ----------->GT1<---------ALFIN1       <---------HSFC1(2)  --------->ARR14(2) ------->TOE2(3)     <---------WOX13(1) <---------DAG2 --------->ANAC46 =============================   tcctcaacgaagtatttagtcggattgaaatattgtccatcaccttctctcagattcacagaagcttgtggtttctgctgcgtttcttcaatcccctgag  1395700                                                                                         <---------DEAR3(1)    <-----------HVH21                                                      <---------HSFB2a(2)   <--- ------ANAC58                                                              --------->HSFB2a(2) <----- ------ANAC58                                  ------>NtERF2             <---------HSFB2a(2) <------- -----ZAT2            --------->ARR14(2)      --------->ANAC58           --------->HSFB2a(2) -------- ---->ZAT2            <---------ARR14(2)      --------->ANAC58   ------>ZmHOX2a(1)       ------>ZmHOX2a(2) ->RAV1(2)       ------>NtERF2                --------->ANAC46   ===============================HOX2a_HOX2a --CDC5   --------->ARR14(2)                 <---------LBD16     ==============================HOX2a_HOX2a ==RAV    <---------GLK1(2)     <-----------GT1--------->LBD16---------->ID1            <------ZmHOX2a(2)   cttggctgtcaagaatcgcctccaaatacccatttatccactcgttccccgccattctgagtttgtcctctgtttctcgagaaaactgagatcggtgctc  1395800    <---------ANAC46    <---------ANAC58                    ---------->DOF2               ----------->GT1    <---------ANAC58                <---------ZAT6                   --------->DAG2             ----- -------DOF2                      --------->MYB52(2)     <---------ZAT2 ----------->GT1         ----- -----DOF2     --------->ANAC58 <--------P               <---------At4g35610        ----------->GT1 --ZAT18       --------->ANAC58<-------GAMYB---------->DOF2    *TSS ---------->DOF2<---------HSFB2a(2) ->ABI4(2) ----------->GT1   <---------TOE2(3)           --------->At4g35610 ------------>CBF -------   tttgtttcttggagagtaagaaactagaattggggttagtgtgaaagaaagaaacagagagctgaaaatgaaaagtgtaaacaatcgagaaaaatagaaa  1395900                  --------->DAG2           <---------ANAC58           <---------LBD16           <---------ANAC58           <---------ANAC46                                <---------ANAC58        <---------WOX13(1)                                 <---------ANAC58       <---------ANAC58                     --------->ARR14(2)       <------------CBF                     <---------ARR11(3)                                     <-       <---------ANAC58                     <---------ARR14(2)                                     --      --------->ATHB12                     <------ZmHOX2a(1) <------NtERF2               <---------MYB52(1) ---->ANAC58     ---------->DOF2  --------->DAG2           <---------ANAC46        <------ZmHOX2a(2) ---->ANAC58--------->LBD16      --------->DAG2           <---------LBD16         <---------ARR11(3) --->DOF2 <---------LBD16       ---------->DOF2 <-----------GT1                   --------->ARR11(3)   gcaagagttgattgcgggaaaaagtttacttcagaaaagggaagaggattttacagaaatggcggattaaacgtgagcgagagagatcatcggtagttta  1396000                                                       <---------MYB46(3)                                                  ------->MYC2                                                  <-------MYC3                                                  ------->MYC3                                                  <-------MYC2                                                  <-------MYC4                                                  ------->MYC4    <---------ANAC55(1)                                                 <--------ABF1    <---------ANAC58                                                 --------->O2     <---------ANAC55(2)                                                 <---------O2     <---------ANAC46                                                 =============================================bZIP_DOF                                                 ===============MYC_MYB          --------->ALFIN1                       ===============MYC_MYB        --------->ALFIN1                         --------->ANAC55(2)       ------->MYC2                              --------->TGA1a  <---------ANAC58       <-------MYC2                              <---------TGA1a  <---------O2       ------->MYC3                              <---------ANAC55(2)       <-------MYC3                         ----------->HVH21     <---------bZIP60(2)        --------    <---------ANAC46                     <---------DEAR3(1)       --------->ANAC55(2)        <-------    <---------ANAC58                    <------NtERF2  --------->MYB52(2)                 -----------    <---------ANAC58                   <---------RAP2.3(1)      <-----------GT1          ----------->GT1    <---------AtLEC2                  <---------DEAR3(1)    <---------YAB1         ---------->DOF2 --------MYB46(3)                    --------->At4g35610 ---------->ID1          ------->GAMYB ------->MYB111(1) --------->YAB1    <---------At4g35610<-------GAMYB         --------->MYB52(1)   gtagttgcatgtgtggagcaatgacaaaaattagttcttagcggcgatgacacgtgtttgttgtaattacgtggcaaatgtaacggaaagagagtttaaa  1396100                        --------->At4g35610       <---------MYB46(3)                        ---------->DOF2                               ------       --------->MYB52(2)                    <---------HSFB2a(2)                             -------- ->AHL20(2)             <------NtERF2 --------->GLK1(2)                                      <------- --AHL20(2)           <---------ZAT18<---------GLK1(2)                              <-----------GT1 >GT1<---------MYB52(1) <---------At4g35610  --------->HSFB2a(2)            <---------ALFIN1<--------   tatgagcgtttgttatcttctctgtccgcttccctatgcgattctctctcgaaaagcctctaatccaattagagacttccacctatttactacaaaatct  1396200                                                                     <---------At4g35610                                                            <-----------GT1                                                         <---------ICU4 --------->ATHB12          --------->ARR11(3)                            <---------AHL20(2)       ------->MYC3          <---------ARR14(2)                            --------->AHL20(2)<---------WOX13(1) --->TOE2(3)           ----------->GT1           ----------->GT1   <---------ZAT14 <-------MYC3 ->ARR11(3)           --------->DAG2           ---------->DOF2     --------->ZAT14 ------->MYC3 --ARR11(3)          ---------->DOF2    ----------->HVH21<---------AHL20(2)----------->HVH21 -GLK1(2)<---------CCA1(2)  <---------YAB1     --------->ZAT14 <---------ALFIN1  <-------MYC3     ---   caatttttctcaaatcttgtttataaagttacaattagtcgaatgacagtaaagtttatttattaccacttcgctgattgacacatgtgtaagagaagaa  1396300                                            <-----------GT1                               <---------TOE2(3)                               <---------TOE1(3)     <----------DOF2                           <----------DOF2 <-----------GT1 <---------YAB1      --------->At4g35610  <---------AHL20(2)    <------ZmHOX2a(1) <---------AHL20(2)  <---------At4g35610 --------->AHL20(2)   <---------TOE2(3)   --------->ATHB12 ------>ICU4      ---------->DOF2<------ZmHOX2a(1) ------>ZmHOX2a(1)       --------->ZAT6      ------   atttttattgtcaaattagtaaaagctgactttaaggaaacaattttatcttcctctttagttttaggaagaatgaaacactattcattgagtagtccta  1396400  Previous    Next  AGI:  At1g04920.1    Description:  ATSPS3F (sucrose phosphate synthase 3F); sucrose-phosphate synthase/ transferase, transferring glycosyl groups. similar to ATSPS1F (SUCROSE PHOSPHATE SYNTHASE 1F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G20280.1); similar to ATSPS4F, sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G10120.1); similar to ATSPS4F [Arabidopsis thaliana] (TAIR:AT4G10120.2); similar to sucrose-phosphate synthase isoform B [Nicotiana tabacum] (GB:ABA64521.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50074.1); similar to hypothetical Range:  from: 1391501    to: 1395863    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g04930.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT2G32840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67192.1) Range:  from: 1396292    to: 1399052    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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