Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <----------DOF2               ------>ZmHOX2a(2)              <---------RVE1(1)              <------ZmHOX2a(2)             <-----------ARR10             --------->AGP1             <---------ARR11(3)             <---------AGP1             --------->ARR11(3)             --------->ARR14(2)                 --------->At4g35610             <---------ARR14(2)                 <---------At4g35610          --------->MYB52(1)     -        --------->MYB52(1)              <---------GLK1(2)                  <---------WOX13(1)       <       ----------->HVH21            ---------->DOF2              <-----------GT1                  ---   tctaaatccctaacagatcttttctctacatttctcacaaaagattgttctgctgatgaattggagtttacctgttgattaactgatacggttttctcaa  1382200                                           --------->ARR14(2)                                           <---------ARR14(2)                                       --------------->AGL15                                       --------->TOE2(3)                                      ----------------->AG                                  <---------ANAC58                                  <---------DAG2        <---------ATHB12          <---------ANAC58   ------>NtERF2               ------>ZmHOX2a(1)  --------->LBD16            --------->At4g35610  ------>NtERF2              ----------->RAV1(2)                                  <---------YAB1 <---------RAP2.6(2)         <---------At4g35610                        <---------MYB59 -------->RAP2.6(3)      <---------ALFIN1  --------->GLK1(2)        --------->ANAC58             ---- ---------LBD16       <---------ZAT18 <-----------------AGL1        --------->ANAC58--------->KAN4(2) ------>GLK1(2)       --------->ZAT18-------->P<---------------------WRI1       --------->YAB1   ----   attccggccaatgagatagattagtcccctctcctgccttaccacaatctgcaatacatccaagaagagcaaggcctaacattgattattcgaatgtaga  1382300            --------->TOE2(3)                 --------->TOE2(3)     --------->TOE2(3)               ---------->DOF2      <---------ICU4              --------->REM1(1)   --------->ARR11(3)              --------->ANAC58       --------->ATHB12           <------NtERF2   <---------ARR11(3)         <---------TOE1(3)          --------->ICU4         --------->DAG2 ----->ANAC58       <----------ID1 --------->ANAC58      <---------YAB1     --------->YAB1 ----->ANAC58  ---------->DOF2<---------TOE2(3)<----------DOF2             <---------YAB1   agcaaaatctcaatccataaagaagacaagttaaggtaagaaagaaaacctttttggtcatcattggaacatgtctcatcataaggctgcatcaaattgg  1382400                                      ------>ZmHOX2a(2)                                     --------->CCA1(2)                                     <------ZmHOX2a(2)                                    --------->AGP1                      ------>ZmHOX2a(1)                                    --------->ARR14(2)              ------>ZmHOX2a(2)                                    <---------ARR11(3)             --------->GLK1(1)              ---                                    <---------AGP1                 <---------GLK1(1)            <----             ---------->DOF2        --------->ARR11(3)            <---------ARR11(3)            -----   <---------ANAC58                 <---------ARR14(2)     --------->ANAC58                 <--------   <---------RAP2.6(2) <---------At4g35610                 --------->ANAC58                 <--------   <---------ANAC58    --------->At4g35610                 --------->ANAC46              <---------MYB52(1) <-----------GT1    <---------At4g35610               --------->ZAT14   =============================   tttttgcggtctcatcaaaggcttctgatgaagaaatagatctgagacttgcacagtttacacgacctgatctcctatggtttttaagaccgtttcttga  1382500                                                                           --------->YAB1                                                                        --------->WOX13(1)                                                                     --------->TOE2(3)                                              =========================HOX2a_HOX2a      <-----------GT1                         <------ZmHOX2a(2)     ----------->GT1 --->ZmHOX2a(2)                              --------->ARR11(3)    <---------YAB1 -----ARR11(3)                               <---------ARR11(3) ------>ZmHOX2a(1) ---->ARR11(3)                         --------->YAB1          --------->TOE2(3)        <---------CCA1(2) -ANAC58                             <-----------HVH21      <---------ARR11(3)       <-------TEIL  -- -ANAC58                       ----------->HVH21  --------->ARR14(2)<---------ZAT6<------MYB46(1)  <- ====HOX2a_HOX2a     <----------DOF2----------->GT1   -------->P<---------YAB1    <------MYB83    *TSS   tcttcttgtaacaaaacgtttgcctttcatgccctgaacggtcataagatcaaatctaccaagttccttattgttaatcacatttggttcgtctcttgac  1382600                                        <---------ALFIN1                                      >>>>>>>>>>>>>>>>>LFY                              <---------ANAC58                           --------->MYB52(1)              --------->TOE2(3)      <-----------GT1                    --------->MYB52(1)     ------              <----------DOF2 <---------ANAC46                         ------->GAMYB --------->YAB1   ------>ZmHOX2a(1)          <---------ANAC58                        --------->MYB46(3) <-----------TGA1 ------->ARR14(2)         <------------CBF      <----------DOF2       <---------MYB52(2) <-----------HVH21 --------ARR14(2)  --------->ZAT6 <---------CCA1(2)         <----------DOF2         <---------ATHB12   aaatcctctgtttcatctttaactctagcattgcttatatcaccactgttctttctcaccagctttaactcaacaaaccggttcgaatcatcgtcactag  1382700                                                                            <---------ARR11(3)                                                                            <---------ARR14(3)                                                                    ----------->RAV1(1)                                                                  --------->MYB46(3)        <--------                                                --------->GLK1(2)<------ZmHOX2a(2)          ---------                     <---------DAG2            <---------GLK1(2)--------->ARR14(2)         --------->GLK1(1)                     <----------DOF2         ----------->ARR10  <---------ARR14(2)         <---------GLK1(1)                    <---------ANAC58     --------->At4g35610  --------->ANAC58          <------NtERF2                    <---------ANAC58     <---------At4g35610  --------->ANAC58   <---------AtLEC2        ---------->DOF2                --------->ANAC46 <---------At4g35610 --------->ARR14(3) --->YAB1         <-----------GT1     <---------LBD16   --------->At4g35610 --------->ARR11(3)  -----   taatcgaaccaaaagggattttgctttttatcgatcgatctacggctgagattctgtctgatgcacgatccaccagaaggtcttcatggaggcatttcct  1382800                      <-------TEIL                     >>>>>>>>>>>>>>>>>LFY                                  <------ZmHOX2a(1)    -----  <---------ZAT6  --------->HSFC1(2)                                       <---------------------WRI1 -ARR14(2)        <---------HSFC1(2)              --------->TOE1(2)     <-----------RAV1(2)     <---- >ARR14(2)   --------->ANAC46       <---------HSFB2a(2)            --------->TOE2(3)        <-------- ->ZmHOX2a(1)<---------------------WRI1    ----------->GT1      <---------GLK1(1)     ---------->DOF2   catagtgtttgatacaccgaaacgtccattgtgaaattttggaagaggtaaacctagaaaccctagaaatctcaacaggagatgtatacaaagagatgta  1382900                                                                             --------->ANAC58                                                                             --------->ANAC46                                                                             --------->ANAC58                                                                             --------->ANAC55(1)                                                                          <---------REM1(2)                                                                    --------->ARR14(2)                                                                    <-----------ARR10                                                                    <---------ARR14(2)                                                                    ------->TEIL                                                                    <---------ARR11(1)                                   ------->TEIL                    <---------CCA1(2)                              <---------GLK1(1)                    <---------ARR14(1)   --------->ANAC58           ---------->DOF2                    <---------ANAC58   --------->ANAC58      <-------TEIL                            --------->ANAC55(2) -->TEIL   --------->ANAC58   --------->GLK1(1)                  <---------ANAC58 ---TEIL   --------->ANAC58  --------->ARR14(2)             <---------ATHB12<---------LBD16 -------AtSPL8          --------->GLK1(2)      ----------->GT1   <---------ANAC55(2) <---------YAB1   catagaagcaaataagctatggagagattcagaaatgcgcctatgagaccagtgaaattccaatagtgcgtatctaaacacggcattttgataaatagat  1383000                                       --------->AtMYB61                                       --------->DEAR3(1)                                       <---------ALFIN1                                    --------->ANAC46                                 <---------ARR14(2)                                 --------->ARR14(2)                                ------>MYB46(1)                                    <---------YAB1                                ------>MYB83            --------->ANAC58         <----------DOF2                           <-----------GT1    ----------->GT1         <---------ANAC46<---------WOX13(1)                    <-----------ARR10 --------->MYB46(3)--------->ANAC58--------->ALFIN1   tagtttctatagctctgagtcaaatctattcaccaaatccaccacctatgggaaaatcaagaaacatggatgatgtgttcgaactttgatagacccattt  1383100  Previous    Next  AGI:  At1g04890.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43544.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) Range:  from: 1380381    to: 1382598    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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