Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ATHB51                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                --------->HSFB2a(2)                                                <---------HSFB2a(2)                                         --------->AHL20(2)                                    <-----                                        <---------ARR11(3)                  <---------REM1(1)  <-----                                        <---------AHL20(1)             ---------->DOF2        -------            ----------->GT1             --------->AHL20(1)        ----------->GT1             ------- ---------ICU4            <---------AtMYB61  <-----------GT1    <---------ANAC58     <---------DAG2<- -------->ATHB51         <---------TOE1(2)<---------ICU4        <---------ANAC58     <----------DOF2 ----->YAB1 <---------ANAC55(2)         --------->ARR11(3) <---------ICU4  --------->ARR11(3)<-------   cataatttcatattaagtgaaaactcgtatggtctaagagaaaatatttactagaaaataattctgacttgataaaagatgtagtcgctttataggttgg  1349800   --------->ANAC46   --------->ANAC58                                                             <---------DAG2 -MYB46(1)                                                                <----------DOF2 -MYB83 --------->bZIP60(2)                                             --------->At4g35610 -->ALFIN1  --------->WOX13(1)                                 --------->AHL20(2)                <--- -->MYB111(2)                                      ----------->GT1    <---------ZAT18 <---------ANAC58 -----ZmHOX2a(1)                            --------->TOE2(3)  <---------AHL20(2)     <---------ANAC58 -P--------->ANAC58                         --------->TOE1(3) --------->AHL20(2)<----------DOF2------   aggacaggccatgtcaatctatggaatattgaactatctatataaaccctaaaatgtgatttcatttatttgtgagctttagctttttaggtgtcatcaa  1349900                                                                          <------MYB46(1)                                                                          <------MYB83                                                                   <---------MYB52(1)                                                                  <------NtERF2  --------->YAB1                               ---------->DOF2    --------->At4g35610         ------- <---------ATHB12                             <---------ATHB12  <---------RAP2.6(2) --------->ZAT6 ------ATHB12           <---------------------WRI1    <---------YAB1  --------->ATHB12       <------- --->WOX13(1) <---------GLK1(2)       <---------MYB52(2) <---------YAB1 <---------WOX13(1)   --------   tcaatgatgtaaactagaaactcatatgctatacttccaaacaaaccaataaagtttttattatgggccgctagattggtccattaacactataagatat  1350000                   <---------MYB59                                <---------AHL20(2)                  --------->ANAC46                          --------->YAB1            --------->TOE2(3)                            --------->WOX13(1)           <--------HAHB4                               ------>ZmHOX2a(2)    ---------->DOF2          <---------YAB1                                <-------TEIL       ----------->HVH21          --------->ICU4                       <---------YAB1    <---------AHL20(1)    --------->TOE2(3)          <---------ATHB12                 --------->ARR11(3)    --------->AHL20(1)    --------->YAB1 -->CCA1(2)<---------ICU4                <---------YAB1<------ZmHOX2a(2) <---------ANAC58 --ARR11(3)--------->YAB1            <---------DAG2   --------->ARR14(2) <---------ANAC46    <------- ->ARR11(3)--------->ATHB12          <----------DOF2  <---------ARR14(2) <---------ANAC58   ---------   atagtctggcccatcattagacccaattttgtattccgactttatgattttgtttggatccatcatatatatttggggtgaaagtgtaatcttattaaac  1350100                                 <---------ANAC58                                 <------MYB46(1)                                 <---------ANAC46                                 ----------->GT1                                 <---------ANAC58                                 <------MYB83                     <---------ANAC58                     --------->ANAC55(2)                     <---------ANAC58                     <---------ANAC55(2)<---------ARR11(3)                                     <-----                   <---------AHL20(2)   --------->ARR11(3)                                     <-----                   <-----------GT1 <--------P                              --------->ATHB12    ------                <---------ICU4  --------->MYB59                           <---------YAB1       ------       <------------CBF   <---------ANAC58--------->TOE2(3)    <---------GLK1(2)           --------->DAG2 ----GT1       --------->ICU4   <---------MYB46(3)          --------->HSFB2a(2)           ---------->DOF2 >AHL20(2)----------->GT1 <---------ANAC58--------->YAB1    <---------HSFB2a(2)*TSS ----------->GT1   atttaggggtattggtaaaaattacttgacttgttgggtaagtatcttaatattcgataagtctagaatttcgattttgattagacttgtgaaaaagtga  1350200                                                                                                  <--                                <---------ANAC58                                               <-----                                <---------ANAC58                                               ------                              <---------ARR14(2)                                              <------                              --------->ARR14(2)                                       -------------- ----ZAT18                  <------MYB46(1)                                            -------------- ----ZAT14                  <------MYB83                                              <-------------- --->ZAT14                 --------->MYB59   <-----------HVH21                        <-------------- --->ZAT18        ---------->DOF2         ------>ZmHOX2a(1)       <---------ALFIN1   <-----------GT1   actcagaaattgtgctcgcccaaagtagttcggttcttgtgttcctccgtctgatcaactcttcttctccacctctaggtttctaattttccgattagga  1350300                 ----------->ARR10                 --------->MYB52(2)                 --------->MYB59               <---------MYB52(1)       --------->DEAR3(1)       --------->DREB2C(2)       <---------ATERF1(2)       --------->ANAC46       --------->RAP2.3(2)       --------->RAP2.3(3)       --------->ATERF1(2)       --------->RAP2.6(2)       --------->RRTF1(3)      --------->ATERF1(1)      --------->RRTF1(1)      --------->ORA47(2)      --------->RAP2.6(1)      --------->DEAR4(2)      <------NtERF2      --------->RAP2.3(1)     <---------RAP2.3(1)     ------>NtERF2 --------->ARR14(2)     <---------At4g35610     --------->At4g35610     <---------DREB2C(1)     <------NtERF2 <---------ARR14(2)     <---------DEAR4(2)     --------->ATERF1(1)     --------->DREB2C(1)          --------->MYB52(2)     <---------ATERF1(1)       <-------GAMYB    <---------ATERF1(2)       <------MYB46(1)    --------->RAP2.6(2)       <------MYB83    --------->ATERF1(2)      --------->MYB55(2)    --------->ANAC46         <---------MYB46(3)    --------->DEAR3(1)      <---------MYB55(1)                  <---------ANAC58    <---------DEAR3(1)      <--------P                       ------>ZmHOX2a(1)   <---------RAP2.6(2)      --------->ALFIN1            <---------ALFIN1                            < -------ICU4   <--------P<---------DEAR3(1)          --------->ANAC58                  --------->ARR11(3) -ZmHOX2a(1)--------->ICU4<---------DEAR3(2)         --------->ANAC58                  <-----------ARR10 --->YAB1  --------------------->WRI1               ------->TEIL<---------ANAC58       <---------ARR11(3) ---YAB1<---------RAP2.6(3)<---------MYB52(1)     ------->GAMYB <---------ANAC46      <---------CCA1(2) --->AG--------->RRTF1(2)<---------ATERF1(2)     --------->MYB46(3)                 --------->YAB1  < --->AGL1<------NtERF2   --------->ATERF1(2)     <---------MYB52(2)         --------->ANAC58        < ---AGL1------>NtERF2  ------>NtERF2           --------->MYB52(1)           --------->ANAC46      <-- ---AG--------->ERF1   --------->LBD16        <---------WRKY38(1)           --------->ANAC58 <-------   taatggccgccgccatggttagttccgccggtgggttactggcaatgctcaacgaaccccatccttccttgaaacttcacgctctctcatatctcatcag  1350400      <-----------------AGL2      <-----------------AGL3      ----------------->AGL1      ----------------->AGL2      <-----------------AGL1    <---------WRKY18(1)   --------->WRKY45                    --------->WOX13(1)   --------->WRKY38(1)  ------>ZmHOX2a(2)   --------->WRKY12    <------ZmHOX2a(2)  <---------WOX13(1)   <---------GLK1(1) <---------ANAC58      --------->GLK1(1) <---------ANAC58     --------->ARR14(2) ------MYB46(1)       --------->ARR14(3) ------MYB83          <---------ARR14(2)    <---------ANAC55(2)                <-----------GT1 ---------MYB46(3)    <---------ARR11(3)    --------->ANAC55(2)         <---------AHL20(2)         <- -------WOX13(1)      <---------ARR14(3)  --------->YAB1                <---------YAB1          ----- --At4g35610          --------->ARR11(3) <---------ATHB12        <----------DOF2      <---------ANAC46   attggttgaccaattttggcccgagatctccactagtgtcccaatcatgtattcaattctctcttctcttttttttaattgtttcccttcgtgaggctat  1350500     <---------ANAC58     <---------ANAC58 <---------MYB52(1)          --------->ARR14(2) --------YAB1                <---------ARR14(2)       <---------ARR11(3)  <-----------GT1<-----------GT1 ---->GLK1(2)    ---------->DOF2           <-----------GT1          <---------TOE1(3)   <-----------GT1   tctgtttgcttactgggagtaaagcttatgggatttggatgagttttagcactcttgatatttcttagttagggtattacattccaagtttttccactct  1350600                                 ----------->HVH21                               =====================bZIP_DOF                               =====================bZIP_DOF                               --------->O2                         <---------MYB52(1)                               ============================================MYC_MYB                               <---------TGA1a                     <-------GAMYB                               <---------O2           <----------DOF2                     <---------MYB52(1)              <---------ANAC58                    --------->TOE2(3)                <---------ANAC58      <---------YAB1        ----------->ARR10      --------->TGA1a <---------AHL20(2) <-----------RAV1(1)  <---------ANAC46 ----------->GT1       <----------DOF2  --------->ANAC55(2)      >>>>>>>>>>>>>>>>>LFY   tgtgtcgagttagatttgaatgcgttaattcacaagtgacaaactttattgaattgctttacttaattctgttgattctgaatagaaccattgttatctg  1350700  Previous    Next  AGI:  At1g04810.1    Description:  26S proteasome regulatory subunit, putative. similar to 26S proteasome regulatory subunit, putative [Arabidopsis thaliana] (TAIR:AT2G32730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81101.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44405.1); similar to 26S proteasome subunit RPN2A [synthetic construct] (GB:AAP82172.1); contains InterPro domain 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); contains Inte Range:  from: 1350179    to: 1355441    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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