Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ANAC58                                                                               --------->ANAC58                                            --------->MYB59                 --------->MYB46(3)                                            --------->MYB46(2)              <---------ABI4(2)                      --------->GLK1(1) <------MYB83                       --------->ANAC58              <------ZmHOX2a(1)         <------MYB46(1)                    --------->ANAC58 ---------           <---------LBD16       ------->TEIL                         <---------TOE2(3)<---------ANAC46        <---------ZAT14       --------->ANAC46          --------->TOE1(2)<--------P    <---------REM1(1)   gaaatcagactactcaggatgcacaaatccatacgaatcgataggttaggcaaataaacctagaaacaaatcgaggtaagcaccgaatggtgtaagatta  1333200                      ----------->GT1                                            <------MYB46(1)                     --------->DAG2                                        <-------GAMYB                 --------->ANAC58                          <---------TOE2(3)   <--------P                 --------->ANAC58                          <---------TOE1(3) <---------REM1(1) --------->TOE2(2)  ---------->DOF2          --------->HSFB2a(2)     <-----------HVH21 -->GT1     <------ZmHOX2a(2)                <---------HSFB2a(2)----------->HVH21<------MYB83   aaacctatgcatagatcaaacgaaaagtgacttactgaatccatcttcgacaaggtaattgaaggtatgaccgtcgcagttgtaggtgaacttgttgttc  1333300                                                                                       --------->ZAT2                                                                                       --------->At4g35610                                                                                       <---------ZAT2                                                                                       <---------At4g35610                        <---------ZAT2                                                --------->ANAC58                        --------->ZAT2                                                --------->ANAC58                 <------NtERF2                                                     ------>NtERF2            <---------HSFB2a(2)                                                    --------->LBD16            --------->HSFB2a(2)                                                   <---------ANAC46         --------->GLK1(2)                                                      --------->SPL7       <---------HSFB2a(1)                                               <------ZmHOX2a(2)       <---------At4g35610                                              --------->ARR11(3) --------->ANAC58       --------->HSFB2a(1)                                 --------->ZAT14     --------->ALFIN1       <---------HSFC1(2)          ----------->GT1         <---------ZAT18   --------->DEAR3(1)       --------->HSFC1(2)         <---------TOE2(3) <---------GLK1(1)   <---------ARR11(3) --------->ANAC46  --------->ANAC58      --------->At4g35610   --------->TOE2(3)        <------ZmHOX2a(1)   --------->ANAC58  --------->ANAC58      <---------At4g35610<-----------GT1 <---------ZAT14 <---------At5g28300   gaagacggaagcttctggaggcactgagcagcgattgaggtgaaattacctttgaaatcagtgaactcaacgaggatcaccgtgccgcgagctacgaaac  1333400                                                                                      <---------ANAC46                                                                                      <------NtERF2                                                                                     <---------LBD16                                                                                     <------NtERF2                                                                                   --------->ATERF1(1)                                                                                  --------->ATERF1(1)                                                                                  <-------GAMYB                                                                                  <-----------HVH21                                                                                 <---------MYB46(3)                 ------>NtERF2                <------ZmHOX2a(2)                  <---------ATERF1(1)           <---------MYB46(3)        <---------CCA1(2)                           <---------DEAR3(2)           <-----------RAV1(1)      ---------->DOF2                              <---------SPL7           --------->MYB52(2)    --------->TOE2(3)                              <---------RAP2.6(2)   <------ZmHOX2a(2)             --------->TOE1(3) <---------ATHB12             <---------DEAR3(1)  <---------ARR11(3)        <----------DOF2  --------->ARR14(2)         <---------AHL20(2)  --------->ARR11(3)     <-----------GT1     <---------ARR14(2)       --------->GLK1(2)--------->LBD16   tgtagatcaacgattgttgcgccattttttctttaccttaaatctccgatccaatcgaccgtctgatcagagaattttttgggcggtcgcggaaaaaaac  1333500               <---------YAB1     <---------HSFB2a(2)     --------->HSFB2a(2)     <---------HSFC1(1)    ------>ZmHOX2a(2)    ===================================HOX2a_HOX2a   ====================================HOX2a_HOX2a   <------ZmHOX2a(2)                         --------->TOE1(2)  --------->ARR11(3)                     --------->ZAT18               ------>NtERF2          <------  <---------ARR11(3)                     <---------ZAT18          --------->DAG2        <------------  --------->ARR14(2)                 --------->DAG2               *TSS--------->ZAT18  --------------  <---------AGP1                    ---------->DOF2              ---------->DOF2 --------->DAG2  --------->AGP1 ---------->DOF2<------ZmHOX2a(1)         --------->DAG2        ---------->DOF2  <---------ARR14(2)<----------ID1  <---------ZAT14      ---------->DOF2     ----------->GT1  <------   tacagatctagaagactatgaaagaacaaaacgaggactaaagtggacatgggagaagaaaaagttgaaaagcgggcaagggtaaagttgtcatttaagg  1333600                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---        ----------->GT1                                                                          <---    --------->ARR14(2)                                                                          -----    <---------ARR14(2)                                                                  ---------->DOF2    <------------CBF                                                                 <---------HSFB2a(2) ---TOE1(3)                 --------->TOE2(3)                                        --------->HSFB2a(2) ---AGL15                   --------->TOE1(3)       ------------>CBF    <------ZmHOX2a(2)       ----- --->AGL3         ----------->GT1       <------ZmHOX2a(1)              <---------ARR11(3)       <---- ---TOE2(3)    --------->YAB1         <---------TOE2(3)       --------->MYB52(1)    <---------ETT(2)-   tagtcagattgggtcaaaaatagtataaaaccttgaatttaaggactaaaaaaaaacaatttcaaaacggagagatcaaacaaatgtcgagaaagttgga  1333700        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->ARR14(2)      <-----------ARR10      <---------ARR14(2)    --------->LBD16   --------->LBD16  <---------LBD16 ------->ANAC58 ------->DEAR3(1)                                            <----------DOF2 ------->ANAC46                                            ------>MYB83 ------->ANAC58                                            ------>MYB46(1) ------>MYB46(3)         <---------ZAT18                 ============================================ ------>ATERF1(1)        --------->ZAT18                 --------------->AGL15--------->PCF2 ------ATERF1(1)         --------->WRKY38(1)             <---------MYB59     <-----------HVH21 ---->ARR14(2)         <-------PIF5                   <-----------GT1       <---------At4g35610 ---->PCF2             ------->PIF5                  --------->ICU4         --------->At4g35610 -----ARR14(2)   --------->DAG2 <---------At4g35610<---------ICU4 <------ZmHOX2a(1) ----->NtERF2   ---------->DOF2 ------>NtERF2   ----------->GT1  <----------ID1                ------   cccgcccggatccagccaaaaagctcgtggactctgccgatggcacaaattagtaattaccaactttaggacaagttcaggtcccatggtcgaagagagt  1333800                           <-----------GT1                      <----------DOF2                   <---------AHL20(1)                   --------->AHL20(1)      --------->YAB1                   <---------ARR11(3)  <---------ICU4                   --------->ARR11(3)  --------->ATHB12                         --------->DAG2                  --------->CCA1(1)   <---------YAB1                 <---------MYB52(1)                  --------->RVE1(1)   --------->ICU4           <---------At4g35610           --------->TOE2(3)        --------->YAB1             --------->At4g35610 =======================================================================MADS_MADS        --------->YAB1 --->GLK1(2)------>ZmHOX2a(1)      <-------TEIL       ----------------->AGL3  ---------->DOF2   ctgtctctgtcttcctcaaaatatctttttttccaaattcatcattgatcagtgattccagtattagctcagttacgaacaaaaggcttaaacataaaaa  1333900                 <<<<<<<<<SARD1                 <<<<<<<<<CBP60g                      --------->YAB1                ------>MYB83                 --------->At4g35610                ------>MYB46(1)          --------->ALFIN1   <---------ARR11(3)              <---------MYB59        <---------DEAR3(1)     --------->ARR14(2)                 <-----           <-----------GT1   <---------YAB1  <---------At4g35610         ----------->RAV1(1)   ------      <---------YAB1        --------->TOE2(3)<---------ZAT2 <---------ARR14(2)                <------    ----------->GT1  --------->TOE2(3) --------->ALFIN1     --------->ARR11(3)             <---------At5g28300   caaatgttgtaattaaccaaatttcttaattcttaatggacggggggagctcatagtcatagtatcttgttacagcaacaaaattcgaacttctaccgtt  1334000                                                                                         -------->HAHB4                                                                                         --------->ATHB51                                                          --------->ALFIN1               <---------ICU4                                                        <---------ANAC58                 --------->ATHB12                                                        <---------ANAC58                 <--------ATHB1                                                        <---------ANAC46                <---------AHL20(2)                                                        --------->ANAC55(2)         --------->AHL20(2)                                                        <---------ANAC55(1)        <<<<<<<<<ARR2                                                       <---------TOE2(3) <---------YAB1 <---------ATHB51        <---------At4g35610                  <---------AHL20(2)      <---------ARR11(3) <---------ATHB12    <-----------HVH21                       <---------AHL20(1)       <---------GLK1(2)  --------->ICU4 ----MYB52(1)         --------->ZAT14       --------->AHL20(2)   ---------->DOF2--------->MYB46(3)  - --->DOF5.7(2)        <---------ZAT14       <---------AHL20(2)  ------>ZmHOX2a(1)--------->WOX13(1) < -GAMYB --------->At4g35610         --------->TOE1(2) <-----------GT1--------->ARR11(3) --------->AHL20(2)   atctcttgtcatctacaattgctctgcattgtttagaacctgctaattaatttgtttaacgtgttcctaaagattttgatcaacaatcaaataattgaaa  1334100  Previous    Next  AGI:  At1g04750.1    Description:  VAMP7B (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B). Identical to Vesicle-associated membrane protein 721 (VAMP721) [Arabidopsis Thaliana] (GB:Q9ZTW3;GB:O23011;GB:Q9MAS4); similar to SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT2G33120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68808.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 1331465    to: 1333566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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