Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------ --------->GLK1(2)                                                                            ------- <---------ARR11(1)                               <--------P                     ----------->RAV1(1) <---------ARR14(2)                              <---------MYB52(1)       ----------->RAV1(2)------>ZmHOX2a(1) ------->TEIL                                   <---------DEAR3(2)        ===================RAV --------->ARR14(2)                             <------MYB83             <-----------------------TaNAC69(2) ---------ARR14(1)                        <---------ANAC58           --------->YAB1          -------- ---------CCA1(2)--------->MYB52(1)       <---------ANAC58         <---------ZAT14          <-------- -------ANAC58   --------->YAB1        --------->GLK1(2)           --------->ZAT14         ---------- -------ANAC58  <---------ATHB12---------->DOF2 <------MYB46(1)--------->ZAT6    ====================   gcgtatctgcaaattccaataacgagattactaaaaaagaaattccgagtcggtaagtctcatgaacagtatagtaacctggacaacatagtctcctggg  1330700                                         ------>ZmHOX2a(1)                                        --------->TOE2(3)                                        --------->TOE1(3)                              --------->ZAT18                       ------>ZmHOX2a(1)                             --------->DOF5.7(2)                  --------->YAB1 --------->YAB1             --------->TOE1(3)                    <---------ATHB12 ---LBD16                  <---------ANAC58                     <---------ARR14(2)            ------- -->LBD16                  <---------ANAC58                     ------>MYB83                <-------- ->LBD16                   <---------ANAC46  <---------LBD16    ------>MYB46(1)        --------->LBD16 -LBD16             ------>ZmHOX2a(1)  ----------------->AG<---------ARR14(2)        <---------LBD16 ->RAV1(2)       ------>ZmHOX2a(1)     ----------------->AGL1--------->MYB46(3)    <---------REM1(2) ==RAV     <<<<<<<<<TBF1   <---------ANAC55(2) --------->LBD16  --------->ARR14(2) -------->P--------   gaatgacaacttcttcttcctcctccataacgtgaactacttccttaaccggagagaagcgtaaccaatcctcatcttcaatttctacccggttatcatc  1330800                                                                    ------>ZmHOX2a(1)                                                                   <---------LBD16                 --                                                     ======================HOX2a_HOX2a            <--                                                     ------>ZmHOX2a(2)                            <--                   --------->At4g35610              =======================HOX2a_HOX2a            ---    <---------ANAC58                                <------ZmHOX2a(2)                            ----    <---------ANAC58                               --------->ARR14(2)    <---------MYB46(3)      <--- -->TOE2(3)        --------->ZAT2                  <---------ARR14(2)    <---------ANAC46        <--- -YAB1            --------->GLK1(2)      <-------TEIL----------->GT1--------->LBD16              ---- ->YAB1       --------->YAB1           --------->ARR14(2)         ----------->RAV1(2)    <---------GLK1(1)   aattttgcttctcttatcagaagctggagagacttcgtcgagattcacaatcggatcggaaattagactcctgggtcgtttacaacccttgatatcagaa  1330900                                                                                          ------>ZmHOX2a(1)                                                                                       ------>NtERF2                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                                     <------NtERF2                                                                                     <---------At4g35610                                                                                     --------->ATERF1(1)                                                                                    <<<<<<<<<AtERF-7                                                                                    <---------ERF1                                                                                    <<<<<<<<<AtERF-5                                                                                    ------>NtERF2                                                                                    <<<<<<<<<AtERF-4                                                                                    <---------ATERF1(1)                                                                                    <<<<<<<<<AtERF-1                                                                                    <---------DEAR3(2)                                                                                    <<<<<<<<<AtERF-3                                                                                    <---------ORA47(2)                                                                                    <<<<<<<<<AtERF-2                                                                                    <---------RAP2.3(1)                                                                                    <---------RRTF1(1)                                                                                   <---------RAP2.3(2)                                                                                   <---------DREB2C(2)                                                                                   <---------RAP2.3(3)                                                                                   <---------RRTF1(3)                                                                                   <---------RRTF1(2)                                                                                   <---------ANAC58                                                                                   <---------DEAR3(1)                                                                                   <---------ANAC46         --------->ETT(1)          ------>NtERF2                                   <---------ANAC58  <---------YAB1                  <---------ANAC46                            --------->CCA1(2)    -- ------->GLK1(2)               ----------->HVH21                             --------->ARR11(3)    <- -------ARR14(2)               --------->ANAC46                  --------->ATHB12  <---------RAP2.6(2) -------GLK1(2)                <---------DEAR3(1)             ------>NtERF2  --------->ARR14(2)    -- ------>ARR14(2)             --------->ANAC46                 <-----------HVH21    <---------ATERF1(2) ----->HSFB2a(1)            <---------ZAT18     <----------DOF2<------NtERF2 <---------ARR14(2)    <- ------HSFC1(2)             --------->ZAT18    --------------------->WRI1 <---------TOE2(3) --------- ------HSFB2a(1)       <---------ANAC46   <<<<<<<<<TBF1      --------->DEAR3(1)   --------->RAP2.6(3) ----->HSFC1(2)        --------------------->WRI1         --------->DEAR3(1)<------ZmHOX2a(1)      --   gattccgattgtcggacatgaggctccttgtgcgcgacgcgttcttcttccttttcttcatcgccgtcgattgggtaaggatatggcggctcctcaaagt  1331000                                                  --------->ANAC58                               <---                                                  --------->ANAC58                               <---                                        --------->HSFB2a(2)                                     <---- ------------->AtSPL3                   --------->HSFC1(1)           <---------GLK1(1)          <---- --------TOE2(3)                        <---------HSFC1(1) --------->LBD16                     ------ ------------->AtSPL8                   <---------HSFB2a(2)------>NtERF2                      <------ --------------AtSPL8               <---------ANAC58     <---------LBD16                     <------- ->DOF2                             <---------ANAC58    ------>ZmHOX2a(1)                   --------- ------->MYB59<<<<<<<<<TBF1--------->YAB1    --------->At4g35610     --------->GLK1(1)     <---------YAB1   ttaggtactcatcttcttcttcgtagaaatgagaattggcttctagaagctcaagctcctccggcaatgggatatcgaattccattctctgatatgattg  1331100  <---------ARR14(2)  --------->ARR14(2)         <---------DEAR3(1)                     <---------WRKY18(1) ------At5g28300       <------MYB83                        <---------ANAC46 --------------AG      <---------ANAC58              <---------ARR14(2) -------GT1            <---------ANAC58             <---------GLK1(2) -----WRKY18(1)        <------MYB46(1)         --------->GLK1(2)--------->At4g35610            ------ ----->HVH21          --------->MYB111(1) ----------->GT1  <---------ANAC58                 --------- ---WOX13(1)       --------->ARR14(2)   ----------->GT1    <---------ANAC58                <---------ANAC46 -----CBF          <---------ARR14(2)  --------->DAG2--------->ARR14(2)                    <---------LBD16 >ATHB12    <-----------RAV1(1)       ---------->DOF2--------->GLK1(2)                    <---------LBD16   accgtatcggaattttgttgggatttggtgctcggtgaacaaaagtgaaaatcggaatctggtgtgagcttgagcgggaatgagagtgttttagcgggaa  1331200              ------>ZmHOX2a(2)             <------ZmHOX2a(2)             --------->GLK1(1)            <---------AGP1            <---------ARR14(2)            --------->ARR14(2)            <---------ARR11(3)            --------->ARR11(3)           <------ZmHOX2a(1)  --------->ANAC46    <---------ANAC58          <---------RAP2.6(2)    --------->ANAC46    <-------GAMYB      <------MYB83                <---------ALFIN1    <---------ANAC58   <------MYB46(1)            <---------ZAT18                               <----   <---------MYB46(3) --------->MYB59 --------->AHL20(2)                           <------------CBF  <---------AtMYB61   <---------TOE2(3)<---------AHL20(2)                       >>>>>>>>>>>>>>>>>LFY ---->DOF2 <---------GLK1(2) <---------At5g28300------>NtERF2                  <-----------GT1  <---- >LBD16  <---------TOE1(2)  <-----------GT1     --------->PCF2           --------->AHL20(2) <--------   agttttggttgcaggatctcaaattaggttttacggcccattaaatattcggcccacttaactaaaatagcccaaatatttataccattgtgactacaga  1331300                                                                                <---------YAB1                                                                               <---------TOE1(2)                                                                               ------->TEIL                                                                               <---------TOE2(2)                                                                            --------->ANAC58                  <---------ANAC58               <--------P<---------ZAT6   --------->ANAC46                  <---------ANAC58              <---------ANAC58            --------->ANAC58      <---------ANAC58   ------->TEIL           <---------ANAC58            --------->ANAC55(1)      <---------ANAC58   --------------->AtSPL8<---------MYB46(3)           <---------ANAC55(2) --------CBF     <---------HSFC1(2)           <---------AtMYB61 <---------At4g35610 -----GLK1(2)    --------->HSFC1(2)         <------------CBF    --------->At4g35610             ----- -ZAT14        <---------ARR11(3)  --------->ZAT14      ------>ZmHOX2a(1)   --------->ANAC55(2) -----   ttgttgtttcttgacaagatgcttctgtatgtactactaaactctgtattggttgctcctactgatagcagagtaaacacgtatgtttgaactcataaac  1331400                                                                                       --------------                                                                              <---------ANAC55(2)                    --------->ANAC46                                          <---------ANAC46                 ===========================HOX2a_HOX2a                      <---------TOE2(2)                 ------>ZmHOX2a(2)                                           ------->TEIL                --------->CCA1(2)                                            <---------TOE1(2)                <------ZmHOX2a(2)                                          <---------SPL7                ============================HOX2a_HOX2a                   <---------ANAC58               <---------ARR14(2)                                         <---------ANAC58               --------->AGP1                                             <---------ANAC55(2)               --------->ARR14(2)                                         <---------ANAC46               --------->ARR11(3)                                        --------------->AtSPL8               <---------ARR14(3)                                        <---------------AtSPL3               <-----------ARR10--------->LBD16                          <---------------AtSPL8         <---------RAP2.6(3)   <---------ANAC46                          --------------->AtSPL3         ------>NtERF2         <---------ANAC58                     ---------->TaMYB80 --------------        --------->RAP2.6(2)    <---------LBD16                  --------->ETT(1)       <-------------        ----------->HVH21      <---------ANAC58              <---------MYB46(3)     <---------AHL20(2)        <---------ETT(1)      <---------LBD16                --------->MYB55(2)  ------->TEIL     --- ---->ANAC46   --------->ARR14(3)                           <---------AtMYB61<-------TEIL         --- ---->MYB46(3) <---------ARR11(3)    <------ZmHOX2a(1) --------->TOE2(3)<---------TGA2(2)       -----   gacccgatggccgacaagatctactcaagcgttgcgggaggagtttgaacaaaacaaccttggtggtcggaatatgacgtacgtatatatatgtactacc  1331500                                                                 <---------ANAC46                                                              --------->ANAC58                                                          <-----------HVH21                                                         --------->bZIP60(2)                                                       --------->ANAC58                                                       --------->ANAC58      <-----------GT1                                 <---------ZAT18      --------->MYB52(1)                             <---------ALFIN1 ->AtSPL8                                           --------->At4g35610 ->AtSPL3                                           --------->ZAT2                                <-- --AtSPL8                                  <---------TOE2(3)  --------->ANAC46                    --- --->MYB83                     <---------CCA1(2) --------->MYB46(3)       --------->TOE2(3)      <--- --->MYB46(1)        --------->ZAT18      ---------->DOF2--------->ANAC46--------->YAB1         <---- ---->AtMYB61        <---------ZAT18     <---------AHL20(2)   --------->ANAC58       --------->TOE2(3)   atccctagtaacgatatagagagggcactactcttatctaaatttaaagtaaccagcacacatcacgccgtataatcgtcaatacaatctcaaattttta  1331600  Previous    Next  AGI:  At1g04730.1    Description:  AAA-type ATPase family protein. similar to ATRFC1 (REPLICATION FACTOR C 1), ATP binding [Arabidopsis thaliana] (TAIR:AT5G22010.1); similar to ATPase, AAA family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95127.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP06831.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 1325384    to: 1331085    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g04750.1    Description:  VAMP7B (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B). Identical to Vesicle-associated membrane protein 721 (VAMP721) [Arabidopsis Thaliana] (GB:Q9ZTW3;GB:O23011;GB:Q9MAS4); similar to SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT2G33120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68808.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 1331465    to: 1333566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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