Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <-------TEIL <------MYB83 <------MYB46(1) -------->MYB46(2) -------->MYB111(2)                                                        <----------DOF2 -------->MYB111(1)                                                <---------ARR11(3) -------->MYB59           --------->WOX13(1) ---------->ID1        --------->ARR11(3) ---------MYB46(3)  ---------->DOF2        --------->WRKY12        --------->GLK1(2) -------P           --------->ZAT14        --------->WRKY38(1)     <-----------ARR10 --------MYB55(1) --------->ANAC46         ----------->HVH21      --------->RVE1(1)             ----- ---MYB46(1)   --------->ZAT14             --------->WRKY45    --------->YAB1             <---------- ---MYB83      <---------ZAT14        --------->GLK1(2)       --------->AHL20(2)    <----------DOF2 ----WOX13(1)  --------->ZAT18       <---------GLK1(2)<------ZmHOX2a(1)  --------------->AGL15  -----   ggtaggtacatggagactacactaaagtcattcacatgggattctttgacccattaggagccaaataaaaatcttctctttttagtcttttttttccatc  1313200               <------ZmHOX2a(2)              --------->ARR11(3)          <---------ANAC55(2)                                              --------->ANAC55(2)    <---------YAB1--------->ANAC58                                         <---------ANAC55(2)   --------->AHL20(2)                                               --------->AHL20(2)   <---------AHL20(2)                                               <---------AHL20(2)  <---------AHL20(2)                                               --------->YAB1  --------->AHL20(2) <----------DOF2                          --------->ANAC58  --------->YAB1  --------->ANAC58             <---------ARR11(3)  --------->AHL20(2) ---->TOE2(3) <---------ARR11(3)   <---------TOE1(1)          --------->ANAC58               <------- -GT1   <-----------GT1  <----------DOF2  <------ZmHOX2a(2)<------ZmHOX2a(2)        <-----------GT1 ---->YAB1--------->ANAC55(2)      <---------TOE2(1)      --------->ARR11(3)     <---------AHL20(2)--   ttaattaaaattacgagatcacgctttcttttttagtacgagggatcagcatcttaattagatcacgaattaaaatcacatattttatacaaattgcgac  1313300                                                                         ------>MYB46(1)                                                                         ------>MYB83                                                                       <---------MYB111(1)                                                                       --------------->AGL15                                                                       <---------MYB59                                              <---------LBD16          <---------------AGL15                                            <---------ARR14(2)         <---------MYB46(2)                                            --------->ARR14(2)        ----------------->AGL1                                            <---------ARR11(3)        ----------------->AGL3                                            --------->ARR11(3)        --------->ANAC55(2)                                       --------->MYB46(3)             <-----------------AGL1                                      --------->ANAC58            <------MYB83                                      --------->ANAC58           --------------->AtSPL8           <----------DOF2           ------->GAMYB               <---------------AtSPL3        <---------ARR11(3)          <---------MYB55(2)           <---------------AtSPL8        --------->ARR11(3)          <---------MYB111(1)          --------->MYB111(1)   --------->LBD16                  --------->MYB46(3)           <---------MYB46(3)             -----  --------->ANAC46                  <---------MYB111(2)          <---------AtMYB61  --------->LBD16-- <---------LBD16   ----------->GT1 ------>MYB46(1)               --------->MYB46(2)--------->HSFB2a(2) --RAP2.6(2)       --------->LBD16 ------>MYB83                  --------->MYB59   <---------HSFB2a(2) ------->MYB52(1)<---------LBD16  --------->ANAC46    <-------TEIL<------MYB46(1) <---------LBD16 <--   ttaaccggaatacctttagaccggataaattcttaccaacaaccaatatctggaggttcaatatggtttggtacctaattttgtaccggaaattgcagaa  1313400                                                                                                  <--                                                                                                  <--            --------->ALFIN1                                                                     ----            <---------ZAT6  --------->ARR11(3)                            --------->LBD16------>MYB83            <-----------RAV1(1) <-----------GT1                   <---------YAB1         ------>MYB46(1)           >>>>>>>>>TAC1    <---------ARR11(3)             <---------WOX13(1)          --------->AtMYB61     <---------ARR14(2)    --------->YAB1                  <--------P   <---------LBD16<---------MYB59     --------->ARR14(2)   <---------YAB1          <-------TEIL  --------->YAB1 ----------->GT1   <--- ---->GLK1(1)      <---------GLK1(1)          <---------------AtSPL8   --------->MYB52(1)--------->MYB52(1) ------->YAB1     <---------ARR14(2)          --------->MYB59   <---------ICU4--------->DAG2   <----- -------ATHB12    --------->ARR14(2)  --------->YAB1     <---------MYB46(3)  ---------->DOF2  <------   atcatcgtattcgagtgttggatttgctatgatattacattcaaaattttggtacatattggttgatcatgaaaaccggaaaagtaaaaccaaaccggta  1313500                                     <------MYB46(1)                                     <------MYB83                                  <------------CBF      <---------ARR14(2)         --------->ATHB12 <---------At5g28300            <---------TOE2(3)                                ------->GAMYB -------ANAC58                  <---------YAB1           --------------->AtSPL8 <---------MYB52(2) -------ANAC58           <---------ANAC55(2)        <------------CBF            <------------MYB.PH3(2) ----->At4g35610     <-----------HVH21            --------->ICU4                --------->MYB46(3) ------At4g35610    --------->bZIP60(1)           <---------YAB1<<<<<<<<<TBF1<----------ID1      ---- ---P --------->ARR14(2) --------->ANAC55(2)  <---------ZAT18  *TSS     <---------ICU4         <----- ---MYB52(1)        <---------bZIP60(1)     <---------------AtSPL8      --------->YAB1 <----------DOF2   gcttaccgtattttgctaagtgttgtcacttattaagattggtaatagagtacttattgtctgttcttcttcattcattacaacaaactctttgagacct  1313600                                                                                    ----------->GT1                                                                                <---------ARR14(2)                                                                               --------->GLK1(1)                                                                               <---------GLK1(1)    -                                                                          <---------LBD16           -                                   --------->ARR14(2)                 <---------ARR14(2)           <-                                   <---------GLK1(2)                  --------->ARR14(2)           --                                   <---------ARR14(2)                 --------->GLK1(2)          ---- ------>DOF2                  ----------->RAV1(1)         --------->AtLEC2--------->LBD16        <--- ----MYB59                  <------ZmHOX2a(2) <---------GLK1(1)      <---------GLK1(2)    ---------->DOF2   aaagagagagagagcgatagtgagatttagatcaacagatttgaatcgatttctgaaaacatgcagtacaagaatctggggaaatcgggtttaaaagtga  1313700                             <---------HSFB2a(2)                             --------->HSFB2a(2)                           <-------TEIL               <---------ANAC58               <---------ANAC58       <---------SPL7   <---------ANAC58                                     <---------ANAC46    <------------------SPL14<---------LBD16                                  <---------ANAC58 -------->ANAC58        <---------ANAC58                                     <---------ANAC58 -------->ANAC58        <---------ANAC46                                --------->ZAT14 --------ZAT18 --------->ALFIN1                ---------->DOF2          <---------ZAT14 ------->ZAT18 <---------ANAC46      --------->At4g35610               <-----------RAV1(1)     <----- ----->At4g35610    <-------GAMYB    --------->ZAT2                <---------ZAT14<---------YAB1 ------At4g35610 --------->ALFIN1    <---------ZAT2           <---------GLK1(2)   --------->ICU4   gcacgctctcgttcggagcgtgggttacgttcgggaaccagctcgatgtgaaagaagcgaaatcgattcttcagtgttgtcgtgatcatggagtcaattt  1313800                                                                                ------>ZmHOX2a(2)                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                        <------NtERF2                                                                       <------MYB46(1)                                                             --------->ZAT14  <---------ARR14(2)                  --------->ANAC46                           <---------ZAT14  --------->ARR14(2)                  --------->ANAC58                        <---------ANAC58   <---------DEAR3(2)           <---------TOE2(3)                       --------->ANAC58    <------MYB83           <---------TOE1(3)                     <---------WRKY12     <---------DEAR3(1)        <----------CDC5                  --------->GLK1(2)<---------ANAC46  ----------->ARR10    ---------->DOF2                      --------->ICU4   <---------ANAC58 <------NtERF2    ---------    <---------DOF5.7(2)         <----------CDC5 --------->WRKY18(1) <-------GAMYB       <-----------HVH21  --------->DOF5.7(2)          <---------At4g35610 --------->ANAC58 <---------ANAC58    <-----------TGA1 --------->HSFB2a(2)         <------NtERF2     <-----------HVH21    <---------ANAC58--------->GLK1(1) ----ARR11(3)     --------->ANAC58   <------ZmHOX2a(1)   <-------TEIL<--------P<------ZmHOX2a(2)   cttcgataacgctgaggtttacgctaatggtcgcgctgaggagattatgggtcaagcgattcgtgaactgggttggcgtcgatccgatatcgtcatctct  1313900               <------MYB83               <------MYB46(1)               <---------MYB46(3)              --------->ALFIN1              <---------AtMYB61            <---------ANAC58            <---------ANAC46         <-----------RAV1(1)        <---------LBD16       ----------->RAV1(2)     ============================HOX2a_HOX2a     ======================HOX2a_HOX2a     ------>ZmHOX2a(2)    =======================HOX2a_HOX2a    <------ZmHOX2a(2)    =============================HOX2a_HOX2a   --------->ARR11(3)   --------->ARR14(2)   --------->AGP1   <---------ARR14(3)   <---------ARR14(2)   --------->ARR14(3)      --------->MYB52(1)   <-----------ARR10      ------>ZmHOX2a(1)   <---------ARR11(3)    <---------MYB59                                 <---------GLK1(2) ----------->ARR10  ------>ZmHOX2a(1)                                ---------->DOF2 >At4g35610 <---------ANAC58                   <------ZmHOX2a(1)--------->ZAT18   accaagatcttctggggtggtcctggtcctaacgataagggtttatctaggaaacatatcgttgaaggcactaaagcttctctcaaacgacttgatatgg  1314000                           >>>>>>>>>>WRKY38                           >>>>>>>>>>WRKY26                                                 ------>ZmHOX2a(2)                          ----------->HVH21                                                --------->CCA1(2)                        --------->O2                                                       <------ZmHOX2a(2)                        --------->TGA1a                                                   <----------                        <---------O2   <---------ARR14(2)                                 --------->ARR14(3)                        <---------TGA1a--------->ARR14(2)                                 <---------AGP1                        --------->At4g35610                                               --------->AGP1                        <---------At4g35610                                               <---------ARR14(2)                      <-----------RAV1(2)                                                 <---------ARR14(3)            <----------DOF2>>>>>>>>>>WRKY43       <---------AHL20(2)     <-----------GT1  --------->ARR14(2)            ======================bZIP_DOF  ---------->ID1    --------->AHL20(2)          <---------ARR11(3)          --------->ZAT18 --------->WRKY38(1)    <---------AHL20(2)<---------AHL20(2)     --------->ARR11(3) <---------ANAC46   ----------->RAV1(1)<---------GLK1(2)      <---------AHL20(2)   <----------DOF2   attacgttgatgtgctctattgccacaggtgaccaatttcagatttgtttttttatttagtgattttattttttttcacttggttctttgaagatctagg  1314100  Previous    Next  AGI:  At1g04690.1    Description:  KAB1 (POTASSIUM CHANNEL BETA SUBUNIT); potassium channel. similar to aldo/keto reductase family protein [Arabidopsis thaliana] (TAIR:AT1G60690.1); similar to unknown [Populus trichocarpa] (GB:ABK94399.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71569.1); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395); contains InterPro domain Potassium channel, voltage-dependent, beta subunit, KCNAB-related; (InterPro:IPR005399) Range:  from: 1313563    to: 1315749    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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