Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->AHL20(2)                 <---------AHL20(2)               --------->AHL20(2)               <---------AHL20(2)             <---------AHL20(2)             --------->AHL20(2)           --------->AHL20(2)           <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)     --------->AHL20(2)               <---------------AtSPL8     <---------AHL20(2)             <---------TOE1(2)   --------->AHL20(2)              <-----------RAV1(2)   <---------AHL20(2)         <---------ICU4 --------->AHL20(2)          <---------YAB1                             <---------DAG2 ---------ARR11(3)    --------->ARR11(3)                 --------->ANAC46     <---------At5g28300 -------->ARR11(3)    <---------ARR11(3)                 --------->ANAC58    <-----------GT1      <-- ---------AHL20(1)   <---------CCA1(2)<------ZmHOX2a(1)  --------->ANAC58<----------DOF2<---------AtLEC2   aatatatatatatatatatatatatatcttcatcatcgcaggagtacaaacttacttccaaggaaaacatttcgcctttttaccgagcctgcatggacca  1293900               ----------->HVH21        ------>ZmHOX2a(2)        <-----------GT1           --------->TOE2(3) ---------RAV1(2)     --------->YAB1  <---------ARR11(3)                    <-----------GT1       ---   tcaggttttatttcccactgacagtcatcacatataccttgatctctctgagcatcatatatatcaaacgacttgaattgactgtcccattggaaactgc  1294000                                                                   ------->PIF5                                                                   ------->MYC3                                                                   <-------MYC3                                                                   <-------MYC2                                                                   ------->MYC2                                                                   <-------PIF5--------->ARR14(2)                                                                  <---------ANAC55(2)                           =================================================MYC_MYB                           <-------GAMYB                          --------->ANAC46           <-------                          <------MYB83                            <---------TGA1a          ----------                          <------MYB46(1)                         <---------O2 --------->ARR11(3)                         <---------AtMYB61                        --------->TGA1a       <---------ANAC46                       --------->CCA1(2)                          --------->O2 <---------ARR11(3)                       --------->ARR14(1)                       <---------ALFIN1 ------>ZmHOX2a(2)                      --------->ARR11(3)                ====================bZIP_DOF    <---------AtLEC2                      --------->ARR11(1)                ---------->DOF2        <---------ARR14(2)  <-                      <---------ARR14(2)            <---------ANAC46        --------->HSFB2a(2)    --             <---------GLK1(1)                      <---------ANAC58   --------->GLK1(1)<---------ANAC58        --------->YAB1--------->ARR14(2)            <---------ANAC58   <---------GLK1(1)<---------ANAC58 ------->DOF2--------->GLK1(1)           --------->ALFIN1      <------NtERF2------>ZmHOX2a(1)--------   aaaagaacaatgttgatttccaaagatttggttgaaacttgaagtggtactcttgcttgaaaggcaccacgtgaattcctagatcgtcttgcttggattt  1294100                                                                   --------->MYB55(2)                          <---------ATHB12               <------NtERF2                        --------->WOX13(1)              ----------->RAV1(1)                    --------->RAP2.6(2)                 ------>NtERF2                    --------->DREB2C(2)                --------->ANAC46                   --------->MYB46(3)                  --------->ANAC58     <------NtERF2                   --------->DEAR3(2)                  --------->ANAC58    <------NtERF2                 ----------->TCP11(1)                 --------->ZAT18    --------->PCF5                 <---------PCF5                       <---------ZAT18   <---------ATERF1(1) --ARR14(2)     --------->ETT(2)                     <---------ANAC58   --------->ATERF1(1)        -- ->ARR10  <---------TOE1(1)--------->YAB1          --------->SPL7  <---------MYB46(3)          ------ --------------AGL15--------->ANAC58            ------->GAMYB--------->MYB52(1)               ------- ------------->AGL15--------->ANAC58        --------->MYB46(3)    --------->ALFIN1         ------>MYB46(1) ->ARR14(2)    --------->ALFIN1        <---------ICU4<---------ANAC58  <---------ATERF1(1) ------>MYB83   gcaatgtatggtaagaggtggaccgccaatcaagtttgtcatcgtgacaaccgtagcgcgccagaacggtgggaggcccccataacccgaaccaaataaa  1294200                                                              <----------DOF2                                                              *TSS    <--------P                                                             <---------ANAC58                                                             <---------ANAC58          --------->ANAC58                              ======================RAV      >>>>>>>>>TBF1       <----------DOF2           <---------YAB1 <---------TOE2(3) -------->DOF2--------->ANAC58                   --------->ICU4   <-----------RAV1(2)   <---------AHL20(2) ---->DOF2--------->ANAC58<---------DAG2<---------YAB1 ------->TEIL<---------TOE1(3)   <-----------TBP -->AHL20(2)  --------->ANAC58         <---------TOE2(3)<-----------RAV1(1)            --------->AHL20(2)   agaaagaagaagaagcaaacaatagaaactttttccattttgatgtttgtatttatgaatgtggcttttcaggttgctcttggagttgattttatagtat  1294300                                                                                        ------>MYB46(1)                                                                                  ----------->HVH21                                                   ------>MYB83                 --------->TGA1a                                                   ------>MYB46(1)              --------->At4g35610                                                 <---------MYB59                <---------At4g35610                                              <-----------GT1                   --------->ANAC55(2)                                              <---------WRKY18(1)               --------->O2                           <-----------GT1   --------->WRKY38(1)                <---------TGA1a                 --------------->AGL15     <------------CBF                     <---------O2                 <---------------AGL15   >>>>>>>>>>>>WRKY18          <---------ZAT6   <---------MYB59           <---------DEAR3(2)         --------->WRKY38(1)      <---------GLK1(1)<---------ANAC55(2)           <---------MYB46(3)       <------------CBF      ---------->DOF2=================bZIP_DOF        ------------>AtMYB77 <---------MYB52(2)<---------------------WRI1---------->DOF2------>MYB83       ----------->HVH21----------->GT1  <---------YAB1   ================================bZIP_DOF   tccaagggctcgacggtttcttcacatagtaactatcccattgactattgaccaaacaaacaaagaaatcagtgtaaaagtcatgtgaccaaacaaacat  1294400                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                               <---------AHL20(2)                                                          --------->AHL20(1)                                                         --------->YAB1                                                         --------->AHL20(2)                                                      --------->YAB1                                                    --------->AHL20(2)                --------->GLK1(2)                --------->AHL20(1)            --------->YAB1       -------->ZAP1   <---------AHL20(2)--------->TOE2(3)    ----------->GT1           ----------->HVH21  --------->AHL20(2)--------->YAB1          ------>ZmHOX2a(2)  <---------ATHB12      <---------AtMYB61   --------->AHL20(2)--------->AHL20(2) --------->ANAC46   ccaaatcagtaaaatgagaatttagtgtggttttgacccagacaaaaaaaataaaataataatattaaatcttaatggattatgcgaaattgatcgtcca  1294500                                                                                 <-----------GT1                                                                            <---------AHL20(1)                                              <---------ARR11(3)            --------->AHL20(1)                            <---------At4g35610                           <---------TOE2(3)                  <---------ALFIN1            <---------AHL20(2)         --------->AHL20(2)                  ----------->RAV1(1)         <---------AHL20(1)         --------->YAB1            --                 <------NtERF2                --------->ARR11(3)         <---------AHL20(2)        <-                --------->TCP23               --------->AHL20(2)       <---------YAB1           -----               <---------TCP15(1)             --------->AHL20(1)    --------->AHL20(1)  <---------TOE2(3)               --------->PCF5                --------->AHL20(2)     --------->AHL20(2) <---------ICU4               <---------TCP20        --------->ANAC58             --------->AHL20(2)  --------->YAB1               --------->PCF2         --------->ANAC58        ----------------->AGL3--------->YAB1 <-          <----------DOF2   --------->At4g35610      ---------->DOF2<---------AHL20(2)<---------ATHB51   aaaaaacatgggctttggccccacattttctgatgaaattaagcaaaatatattacaaagaagtcccaattttattaatatttttacaataatgttttta  1294600           <-----------GT1       <---------TOE1(3)       <---------TOE2(3)    --------->AHL20(2)    <---------AHL20(2) <---------AHL20(1) --------->AHL20(1)                               <---------YAB1--------->ETT(2) --------->AHL20(2)      <---------ICU4        --------->ARR11(3) ------->AHL20(1)       --------->AHL20(2)     --------->GLK1(2)<---------ETT(2) --------AHL20(2)       <---------ATHB51 <------NtERF2      <---------MYB52(1)    <---------MYB46(3) ---->AHL20(2)          --------->ICU4---------->ID1       <-------GAMYB         <---------TOE1(2) --------AHL20(1)       <---------AHL20(2)     <---------ARR11(3)               <---------MYB52(1) <-   aaatattttaatgttaccttgagaaaataattaagcctttggccccaaaaatcttatagtccgttgtcgacaacttaacctcgtttgttcaaaaatttcg  1294700               --------->LBD16              --------->ANAC46           <---------ARR14(2)           --------->ARR14(2)          <---------GLK1(1)         >>>>>>>>>GT-1                ----------->GT1                     ---------->DOF2         ----------->ARR10          --------->YAB1             <---------ARR14(2)      ----------->GT1            <-----------GT1               <---------ARR11(3)   <---------TOE1(1)         <---------DAG2<---------YAB1      --------->ARR14(2)                   - --------MYB46(3)            <----------DOF2     <------ZmHOX2a(1) ------>ZmHOX2a(1)            <----   gtggtaagaggtaaatccgctactatttcaactttttatcatgttataagaggaaagtttgtcaagttcctcttgtgaaagtgtatttgagagaagcgct  1294800  Previous    Next  AGI:  At1g04645.1    Description:  self-incompatibility protein-related. similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT3G16970.1); similar to self-incompatibility protein 1 [Cucumis melo] (GB:ABY56091.1); similar to self-incompatibility protein 2 [Cucumis melo] (GB:ABY56092.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 1293769    to: 1294262    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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