Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->DAG2                                                                                    --------->DAG2                                                                         ----------->GT1                                                                        ------>ZmHOX2a(2)                                           <-------TEIL                <------ZmHOX2a(2)                                           ------>ZmHOX2a(2)          <---------ARR14(2)                     --------->HSFC1(2)   <------ZmHOX2a(2)           --------->ARR14(2)----------->GT1                     <---------HSFC1(2)  <---------ARR14(2)       <---------LBD16  ---------->DOF2               ---------->DOF2           --------->ARR14(2)  >>>>>>>>>GATA-1     --------->YAB1          <---------TOE2(3)              --------->AGP1    ----------->GT1 <----------DOF2 -->DOF2 <---------DOF5.7(2)  <----------DOF2    ---------->DOF2<-----------GT1<---------TOE2(3)   aattggcccattaacgagaaagacgcttctctcttttctattagatccgttgaaagcgagatagataaaccggatcggtttaatgaaaaggggtaacatc  1261700                                                            ----------->GT1                     <<<<<<<<<TBF1                        <---------ANAC46               --------->ANAC58                <---------GLK1(2)                        <---------ANAC46                --------->ANAC58              <---------YAB1                            <---------LBD16             --------->GLK1(2)              --------->ICU4    <----------DOF2     <---------MYB52(1)         --------->ANAC58            --------->YAB1 <---------MYB52(1)    <-------TEIL                  --------->ANAC58  ----           <-------TEIL   <---------SPL7      --------->MYB46(3)      <-----------RAV1(2)--------->ANAC46   ggaattacaaagtttcatgattcttcttcgttcgctttccaagttccaacgtccgttttggggggaaataaaccaggggacaagaaaatccaagaaaaaa  1261800                                                                                                    -                                                                                                   <-                                                                                               ------                                                                                               ------                                                                                            ------>ZmHOX2a(1)                                                                                            ---------                    --------->GLK1(2)                                                     ------>ZmHOX2a(2)                    --------->ARR11(3)                                                   <------ZmHOX2a(2)                    --------->ARR14(2)                           ----------->GT1        <---------GLK1(2)                    <---------ARR14(2)                           <----------ID1         --------->ARR14(2)              <---------HSFB2a(2)                               ----------->GT1         <---------ARR11(3)              --------->HSFB2a(2)                     <---------AHL20(2)                --------->ARR11(3)    <---------TOE2(3)                          --------->HSFB2a(2)                      <---------ARR14(3)    <---------TOE1(3)                          <---------HSFB2a(2)                      --------->ARR14(3) ----->AHL20(2)     <---------ARR11(3)        <---------LBD16---------->DOF2            <---------ARR14(2)   aaaattcaggtttctgcgagaaaatctggatgaaacagacctatgtgttctgggattttttttcaaagggaaaaaaactcaagggtttaagatcctctgc  1261900     --------->ANAC58     --------->ANAC55(2)     <---------ANAC55(2)     --------->ANAC46     --------->ANAC58                                                          ----------->GT1 <-----------TGA1                                        --------->YAB1 --------->TOE1(2) <-----------HVH21                                      <------ZmHOX2a(2)     --------->DAG2 -------->YAB1                                    <---------bZIP60(2)  --------->At4g35610 --------ATHB12<---------ANAC46                   --------->O2         <---------ZAT2 ------>CBF    <---------ANAC58                   <---------O2         <---------At4g35610 --->ZAT14     <---------ANAC58          <-----------RAV1(1)---------->DOF2  ---------->DOF2 >At4g35610   <---------LBD16    <---------YAB1   <---------ANAC46     --------->ZAT2     <XXXXXXXXXX   aatcgtcacgaaattttgcgcatgtagcctcgtttatgtttctatgttgttgacgtcgatcagaaagttttgaagctgggaaagtgaaattttggttctt  1262000                                                                          <---------ZAT2                                                                  <------------CBF               <---------MYB52(1)                              <---------ANAC58        <---------HSFB2a(2)            ------>ZmHOX2a(2)                                  <------MYB46(1)         --------->HSFB2a(2)           <------ZmHOX2a(2)                                   <---------ANAC58   ------>ZmHOX2a(2)          ------->TEIL   <---------GLK1(2)                     <------MYB83   <------NtERF2          --------->ARR14(2)                                   <---------ANAC46 --------->ARR14(2)          <---------ARR14(2)                                  --------->MYB59--------->LBD16     --------->YAB1  <---------WOX13(1)                   <---------MYB46(3)<---------LBD16   <------    <---------YAB1<---------YAB1                         <---------MYB52(1)<---------LBD16    <------ <---------AHL20(2)--------->ATHB12                     <-------GAMYB     --------->ZAT2      ------- XXXXXXXXXXMIR832-5P<------------CBF         <---------TOE2(3)<---------MYB46(3)<---------ARR14(2)   gattttatcatggatccgttgtgattggattttcaaaagtttgtgttgatgtttctcccgttgttgggtattgtcgagccgggatcgttttagaaaaatc  1262100                                                                                                 <---                                                                                                 <---   ------>MYB46(1)                                                                  <---------GLK1(1)   ------>MYB83------------>CBF                    <---------TOE2(3)             <---------YAB1  <--- <---------MYB59       --------->SPL7   <---------AHL20(2)             <---------YAB1          <----- -----ARR10--------->YAB1             --------->TOE2(3)             <---------ARR11(3)        <------ ---ARR11(3)  <<<<<<<<<<<<<<<<<LFY    <----------DOF2               --------->GLK1(2)        <-------GAMYB -->GLK1(2)<---------ICU4    <----------DOF2   <----------DOF2      --------->ARR14(2)      <--------   tgaccaaattccatcataacaatggtacgagctttctcttctttaatcgcattgtggtttcttctaacaaaatctgattcgttttgatttctctctgttg  1262200          <---------AHL20(2)          --------->AHL20(2)         --------->YAB1                                    --------->YAB1             ----------->GT1 ------ANAC58                                             <---------YAB1              <---------ANAC46 ------ANAC46                                           <-----------GT1          <---------ANAC58 ------ANAC58                                          --------->AHL20(2)        <---------ANAC58 ----ANAC46                 --------->MYB52(1) <---------TOE2(3)                 <---------ANAC46   < ---MYB52(1)              --------->MYB46(3) <---------AHL20(2)       <-------TEIL   <---------AtMYB61 ---RAV1(1)<---------AHL20(2)         ----------->GT1  <---------AHL20(2)   ------->TEIL<---------ANAC46   tgtgatttcaattttaatttttctgtgaacaaacgttttttggttaatttatgtaaatttatcatactgtgatacatgaattttcgtatggtgtatcaaa  1262300                                                                              <---------ANAC46                                                                            <------MYB83          ---                                                                          <---------WOX13(1)      <--                                               --------->AHL20(2)       --------->ATHB12 <---------WOX13(1)                       --------->ICU4   <-------GAMYB                  <---------YAB1  --------->ATHB12            --------------->AGL15      <---------ANAC46           <----------DOF2     <---------YAB1 ---------YAB1    ----------->GT1   <-----------RAV1(1)   --------->AHL20(2)<------MYB46(1)    ------   ttgttattgagtttctaaatgtgtaaaaatggaaccatatgtcgttgaattaaaaaacaaaaaaattccttttttgattggtttgtatatgattgaacaa  1262400                                                             <---------CCA1(1)                                                             <---------RVE1(1)                                                            --------->ARR11(3)                                                            <---------GLK1(2)          <-----------RAV1(1)          <---------DAG2                                ---------->DOF2        <---------At4g35610 ------>ZAT2                                     ----------->GT1            <-------TEIL -------ZAT2<-----------GT1                    ---------->DOF2 <---------AHL20(2)    <----------DOF2 ---->DOF2<----------DOF2                  ---------->DOF2  <---------ARR11(3) <---------CCA1(2)   agctgtgaacaactttactctctctattgattttgttttggatgagaaagaaagaaaaaaaagatttttttgagaaaattcatctctctttgttgttgtc  1262500                                                                                                    <                        <---------ANAC46                                                            <                    >>>>>>>>>ARR2                                                                  --                   --------->ATHB12                                                               <--            <---------ANAC58                                                                     ----            --------->ANAC55(2)                                            <------MYB83          <---            <---------ANAC55(1)         <----------DOF2             --------->MYB52(1)           ----            <---------ANAC46       <---------bZIP60(2)<---------At4g35610  <------MYB46(1)       ----            <---------ANAC58       <---------ANAC46   --------->At4g35610<--------P             <----            <---------ANAC55(2) <---------YAB1     --------->ATERF1(1) ------->GAMYB       --------->ALFIN1         <---------MYB52(1)  --------->ICU4    --------->ZAT14 ---------->DOF2           <---------ANAC46   ttcgattttcagttacctgtttgattgtgtagttatgatgtggtttatgtgcaggctgcttcagccaaagtaacggtagggtctcatgtctgggtggagg  1262600  Previous    Next  AGI:  At1g04600.1    Description:  XIA (Myosin-like protein XIA); motor/ protein binding. similar to XID (Myosin-like protein XID), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT2G33240.1); similar to MYA2 (ARABIDOPSIS MYOSIN) [Arabidopsis thaliana] (TAIR:AT5G43900.1); similar to XIB (Myosin-like protein XIB) [Arabidopsis thaliana] (TAIR:AT1G04160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64632.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40520.1); contains InterPro domain Myosin S1 fragment, N-terminal; (InterPro:IPR008989); contains InterPro domain Myosin, N-termi Range:  from: 1262122    to: 1272375    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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