Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------RVE1(1)                    --------->TOE1(2)                                   <---------ARR11(3)                    --------->TOE2(2)                                   --------->ARR11(3)                  --------->GLK1(2)                                     <---------GLK1(2)     <------                  --------->ARR11(3)                                  <---------TOE2(3)      --------          <------MYB46(1)                                       <---------AHL20(2)          <--------          <------MYB83             --------->MYB46(3)        ----------->GT1   --------->ATHB12 ->DOF2  --------->MYB59<------ZmHOX2a(1)                  ---------->DOF2    <---------YAB1---------   gagactaaaattaggtctaaaatctaggagcaatgtaaccaatacatagtatatgaaatataaaagttaatttagattttttgattagcccaaattaaag  1240000                                        --------->ANAC58   ----------->GT1                      --------->ANAC58         ----------->GT1 ---TOE2(3)                           ---------->DOF2          ---------->DOF2 -->DOF2 <---------AHL20(2)    ---------->DOF2              <---------TOE2(3)        ---------->DOF2 -AHL20(2)                    ------>ZmHOX2a(1) <---------------AGL15        ---------->DOF2 >AHL20(2)                   --------->TOE2(3)  --------------->AGL15     ----------------->AGL1 ----   aaaaatggtatttaaaacagagactcttcatcctaaaggctaaagcaatacaatttttggttaagaaaagaaaaaaaccacaagcggaaaagaaaacaaa  1240100                              --------->ANAC58                    ------->GAMYB           <---------YAB1     --------->ANAC58         --------->YAB1----------->RAV1(1)                             <---------ANAC46           <--        <---------AHL20(2)  ---------->DOF2<---------ZAT18             <---------ANAC58           <-- ------>DOF2     ----------->RAV1(1)    --------->AtLEC2               <---------ANAC58           <--   aaagaactatattatgatgcaacagcaacacaaagcaaaaccttgcacacacacatacaactgtaaacaagtttcttgggactctctattttctcttgct  1240200         --------->YAB1         --------->ANAC46                                                                       -----       ------>MYB46(1)                                                                   <---------AHL20(2)       ------>MYB83              <---------ZAT14      <<<<<<<<<<AtTINY2               --------->AHL20(2)     <---------MYB59             <---------ZAT18      --------->ETT(1)                <---------ARR11(3) -------ANAC58                   --------->ZAT18   <-----------RAV1(1)                --------->AHL20(1) -------ANAC46      <---------GLK1(1)            <---------ICU4                       <---------AHL20(1) -------ANAC58      --------->GLK1(1)----------->RAV1(1)                         ------------>CBF   gcttgaaccaaacacaacaacgatatcccaacgagagcacaacaggtttgattatgtcggaagacaagttttgagagaaaacaaacaatattttataaca  1240300                                                                                        ------>ZmHOX2a(1)                                                                                    --------->ARR14(2)                                                      ------------>CBF              <---------ARR14(2)                                                    --------->PCF2                  <---------ARR11(3)                                                   --------->TCP15(1)        --------->AtMYB61                                                   <---------PCF2            <---------ALFIN1                     <---------AHL20(2)  --------->ANAC46                   --------->MYB46(3)                ----------->GT1          --------->ANAC58                 <---------ALFIN1        <----------DOF2<------------CBF  --------->ANAC58                 --------->ANAC46 ------>ZmHOX2a(1) ----->DOF2 <---------MYB46(3)   ----------------->AGL1                   *TSS  --------->AtMYB61   aaggagaagacttttggttagaaaaaattggtatggccattacaagacatatgggtcccaattctcatcactctctccaccaccaaaatcctcctctctc  1240400                                   ======================================bZIP_DOF                                   --------->TGA1a                            =================bZIP_DOF                            <----------DOF2                        <---------CCA1(2)        --------->TOE1(3)                   --------->YAB1  --------->O2  --------->TOE2(3)     <----------DOF2  <---------ICU4 <---------CCA1(2)     ========================================bZIP_DOF         <----------DOF2 <-----------GT1   tctctctcttttactctgttttcatcatctctttctctcgtctctctcaaaccctaaatacactctttctcttcttgttgtctccattctctctgtgtca  1240500                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                     <---------ANAC46                  <-------GAMYB                 <---------YAB1                    --------->ALFIN1             <---------ANAC58            <---------At4g35610                    <---------ANAC46             <---------ANAC58            --------->ZAT2                         <---------ANAC58             <---------ANAC46            --------->At4g35610                    <---------ANAC58             <-----------RAV1(1)  <----------DOF2--------->ATHB12              <-------TEIL ---------      <----------DOF2     ---------->DOF2<---------ZAT2              <---------YAB1<---------ANAC46<-   tcaagcttcttttttgtgtgggttatttgaaagacactttctctgctggtatcattggagtctagggttttgttattgacatgcgtggtgtgtcagaatt  1240600                                                                            ---------->DOF2                                                                        ------->MYC3                                                                        ------->PIF5                                                                        <-------MYC3                                                                        <-------PIF5                                                                        ------->MYC2                                                                        <-------MYC2                                                                       <------NtERF2                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                      ------>NtERF2                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                    <------NtERF2                                 --------->ZAT2                     --------->ATERF1(1)                                 <---------ZAT2                   <---------RAP2.3(3)                                 <---------At4g35610              <---------DEAR3(1)                                 --------->At4g35610              --------->ALFIN1                               --------->ZAT18                   --------->ATERF1(1)                               <---------ZAT14                  <---------MYB46(3)         <---------ARR14(2)                         <------NtERF2                          --------->ABI4(2)          <---------GLK1(2)                       <---------DEAR3(1)                       --------->MYB55(2)         --------->ARR14(2)    <------NtERF2      <---------ANAC46                        --------->ALFIN1     --------->ALFIN1  <---------ANAC46    <---------LBD16                          <---------AtMYB61  <---------ANAC58  --------->ALFIN1   --------->LBD16                           <---------DEAR3(1) <---------ANAC46 >ICU4               ------>NtERF2                          <---------DEAR3(1)    <---------ANAC58 --------AtMYB61   <---------LBD16                    ---------->CDC5<---------ANAC58     <------ZmHOX2a(1)   ggaggtggggaagagtaatcttccggcggagagtgagctggaattgggattagggctcagcctcggtggtggcgcgtggaaagagcgtgggaggattctt  1240700                      <------MYB83                      <---------ANAC46                      <------MYB46(1)                   <---------MYB52(1)                  <-------GAMYB                 <---------ANAC58                 <---------ANAC58          <-----------GT1       --------->ARR11(3)                --------->ARR14(2)                             ------>ZmHOX2a(1)       <---------GLK1(2)            <---------At4g35610                                 =============       <---------ARR14(2)           --------->ZAT2                     ------>ZmHOX2a(1)<----------DOF2       <---------ARR11(3)           <---------ZAT2          --------->HSFB2a(1)         <---------DAG2       --------->ARR14(2)           --------->At4g35610     <---------HSFC1(2)<---------TOE2(3)      <------ZmHOX2a(1)    <---------REM1(2)    ------>ZmHOX2a(1)   ------>ZmHOX2a(1)---------->ID1 <    <---------TOE2(3)--------->MYB55(2)  <---------ARR14(2) --------->HSFC1(2)<---------TOE1(3)     <    <---------TOE1(3)<---------MYB46(3)  ------->TEIL       <---------HSFB2a(1)   <-------TEIL<------   actgctaaggattttccttccgttgggtctaaacgctctgctgaatcttcctctcaccaaggagcttctcctcctcgttcaaggttcgtcctttttctta  1240800                    <---------bZIP60(1)                      <----------DOF2           --------->ARR11(3)                               <---------ANAC58                <------MYB83           <---------ARR14(2)                               <---------ANAC58                <------MYB46(1)     --------->At4g35610  <---------ZAT6                <------MYB83                        <--------  ============================bZIP_DOF                  <------MYB46(1)                    --------->MYB59  ---------->DOF2   --------->bZIP60(1)                --------->MYB111(1)                 --------->MYB111(1) =============================bZIP_DOF              <---------ANAC46                       --------->MYB46(2) ---------YAB1      <---------TGA1a            <---------GLK1(2)                          <---------MYB55(1) ---------TOE2(3)   <---------ANAC46      <------ZmHOX2a(1)<-------TEIL        --------->LBD16 ---YAB1  <---------CCA1(2)      ----------------->AGL1<---------AtMYB61     <---------LBD16---------   ttaagaaagctcaaatcttgtgatgtgagtgttatgccatctcaggacagaattgtgtaggtgcttttgttttagtttaccctgaataagagttaggtat  1240900  Previous    Next  AGI:  At1g04550.1    Description:  IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor. Identical to Auxin-responsive protein IAA12 (IAA12) [Arabidopsis Thaliana] (GB:Q38830;GB:Q8LA42); similar to IAA13 (indoleacetic acid-induced protein 13) [Arabidopsis thaliana] (TAIR:AT2G33310.3); similar to IAA13 (indoleacetic acid-induced protein 13), transcription factor [Arabidopsis thaliana] (TAIR:AT2G33310.1); similar to unknown [Populus trichocarpa] (GB:ABK94046.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 1240374    to: 1242119    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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