Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ----------->GT1                                                            <---------At4g35610  --------->ATHB12                                                    ------>ZmHOX2a(1)           <---------MYB52(1)                                                    --------------->AGL15      <-------GAMYB                                                    <---------------AGL15     --------------->AGL15                                                   ===========================================MADS_MADS                                                   ----------------->AGL3     <---------------AGL15                                                   <-----------------AGL3     --------->ANAC55(2)                                                 <-----------GT1              <---------ANAC55(2)       ------>ZmHOX2a(1)                         ---------->ID1              <-----------------AG---- -----------GT1                     <------------------------ANAC81          <-----------------AGL2 ------DOF2    <----------DOF2  <----------DOF2 <-----------GT1          <---------ICU4         ----- >GLK1(2)<---------ALFIN1     <------------------------ANAC81      <----------DOF2   <---------MYB46(3)   tttcacttcctccaactctttctctctctctggccttttttttttttttttttcctatttatagctcatctttagtaattccgttattggttaaatttcc  1231200                                  --------->ANAC58                             <---------MYB111(1)                                  --------->ANAC58                             --------->MYB46(3)                        --------->ANAC58                                      ------>MYB83                        --------->ANAC58                                      ------>MYB46(1)                        <---------ANAC55(2)     <----------DOF2             ------->GAMYB                     <---------ATHB12        ------->TEIL                <-----------GT1 -->ZmHOX2a(1)     --------->WOX13(1)       <---------CCA1(2)       ---------->DOF2        <---------GLK1(2) ---->TOE2(3)     --------->MYB46(3)---------->DOF2       --------->ANAC46 --------->MYB46(3)--------   taaacatgtttttggtatcaacaatcaagtaagtgcaagaaagtttgtatctttctctaaacccaatttccaaagtaaccaactactaaaccagaatgtt  1231300                                                                                      --------->ZAT18                                                                                     <-----------HVH21                                                                                 ---------->DOF2    < ---------->DOF2                            <-----------GT1                    <-------TEIL    ------ --->GT1             <----------DOF2    <----------DOF2                       --------->CCA1(2)<-----   acacaaagtaagtcactaaatgactttaaaaacaagattagactttaaactagattagagacatacttatttggaataagattcaaaggtcactagtagc  1231400                                                                     --------->YAB1      --------->At5g28300                                            ----------->GT1     ----------->GT1                                       --------->YAB1  <------MYB83                                            <---------ATHB12  <------MYB46(1)                            --------->ARR11(3)   <---------AHL20(2)          <------ --------->MYB46(2)                       --------->AHL20(2)  --------->AHL20(2)      --------->WOX13(1) --------->MYB111(2)    ----------->RAV1(1)  <---------ARR11(3)  <---------YAB1    --------->At5g28300 --------->MYB111(1)   <----------ID1     <---------AHL20(2)  <---------AHL20(2)  ----------->GT1 --------P---------->DOF2                --------->YAB1   --------->AHL20(2)    --------->ZAT14 --->STY1(2)     --------->At4g35610    <---------YAB1<---------ATHB12          <---------ZAT14 ----STY1(2)     <---------At4g35610 <---------YAB1 --------->WOX13(1)       --------->At4g35610   tagtaggtggtaaaaaggaagctaaacaacaaataaactcttattaaaatctttcaatcaataaatatttattgtaatttgctgcagtaaatcaaacatt  1231500                                       ---------->DOF2                                   <----------ID1                                ---------->DOF2                            --------->TOE2(3)                                                   -----      --------->HSFB2a(2)  ----------->GT1                                      ----------->HVH21   -      <---------HSFB2a(2) <-----------------------TaNAC69(2)                  ------>ZmHOX2a(1) ----- ------CBF           <-----------RAV1(2)                                     *TSS             -------   gtacagtttcagaactgaatggctcagaagcgttaaaaggaaaaagagactctctctctctctctctctcccctaatctcctctcacatggtcatcaaaa  1231600                                                                                     --------->WOX13(1)                                                                                   --------->MYB46(3)                                                                                  --------->ANAC58                                                                                  --------->ANAC58        --------->ANAC58                                                          -------->P        --------->ANAC58                                                      --------->ANAC58      ---------->DOF2                                                         ------>MYB83  --------->ANAC58                                                            ------>MYB46(1)  --------->ANAC58                                                            --------->AtLEC2 ---->ANAC58                                                                  --------->ANAC46 --------->DOF2               --------->LBD16                  <----------DOF2--------->ANAC58 ---->ANAC58         ---------->DOF2--------->TOE1(2)     ---------->DOF2 ------>NtERF2         ----- --->DOF2        <----------ID1   ------------------------>ANAC81       --------->MYB46(3) --------->TOE2(3)   gccaaagccaaagccaaaaaaaacaaagaacccagaaacctagaagacagaaacaaaaatcaaagctttactgagccaccaagcaaccaattacatcaac  1231700                       --------->HSFB2a(1)             --------->ANAC58                    ---------->DOF2                  ---------->DOF2                ------>MYB46(1)             <---------------AGL15                ------>MYB83             --------->ZAT6--------->ANAC58           <---------ATHB12               ----------->RAV1(1)     --------->ARR11(3)                    --------->ANAC46      --              --------->AtMYB61        <---------ARR11(3)       <----------DOF2<---------ALFIN1    --         ---------->DOF2 --------->GLK1(2)  --------------->AGL15        <-----------GT1       <----- ---->ZAT6   --------->MYB46(3) <----------DOF2   --------->YAB1--------------------->WRI1   --------   tctaaaacccataaaaccaacacaaagattccatctttcaatatctctacaatgagaaagccaatgctttgattttttcccccaatctttcttccaagat  1231800                                                                                    <---------YAB1                                                                                  <---------ICU4                                                                                  --------->YAB1                                                                                 --------->ICU4                                                                                 <---------YAB1          --------->DAG2                                                       --------->YAB1    --------->ANAC58                                                           <---------ICU4    --------->ANAC58                                                          --------->ICU4  ---------->DOF2                                                             <---------YAB1 ------->TOE1(3)            ---------->DOF2                                 --------->YAB1 ------->TOE2(3)        --------->ANAC58                                --------->At4g35610 ----ARR11(3)    --------->AtMYB61                                  --------->TOE2(3)       <-------- ->ANAC46---------->DOF2--------->ANAC58              <----------DOF2------>ZmHOX2a(1) <---------bZIP60(2)   acctcaaagcaaaaagagaccacaagaagcaaaagagtctacatacaaaaatgggtctttcaatctcattcctcagcatcatcatgatgatgtgtctact  1231900                  ----------->GT1               <---------ANAC58               <---------ANAC46               <---------ANAC58      --------->GLK1(1)      <------ZmHOX2a(2)     <---------ARR11(3)     --------->ARR14(2)             ------->GAMYB     <-----------ARR10             --------->ANAC58     --------->ARR11(3)            --------->ANAC58                                           -------     <---------ARR14(2)         --------->REM1(1)                     --------->ANAC58  <-------TEIL     --------->AGP1         --------->At4g35610               ================================HOX2a_HOX2a     <---------AGP1     --------->ARR14(2)                    <------ZmHOX2a(1)        <------ZmHOX2a(2)    <---------CCA1(2)   <---------ARR11(3)                  <---------TOE2(3)         <---------ARR14(2)  <---------HSFB2a(2)   --------->ARR11(3)      --------->TOE2(3)     --------->ANAC58--------->AGP1  --------->HSFB2a(2)   --------->GLK1(2)       --------->TOE1(3)   <---------AtLEC2  --------->ARR14(2) -ZAT14------>ZmHOX2a(2)<---------ARR14(2)--------->ANAC46---------->DOF2            --------->At4g35610   gtttccagatctcaatgtcgtagtaaaatctgctacaacggaatacacaaccttaatctacaaaggatgtgcaagacaacaattctcagatccatctggt  1232000                                                                                            ---------                                                                          ----------->RAV1(1)     ---                                                            --------->GLK1(2)               ------->GAMYB                                                           <---------ARR14(2)         --------->YAB1                                              --------->ZAT14          --------->AtMYB61   --------->MYB46(3)                                              <---------ZAT18         ----------------->AGL1---------        --------->ANAC58       --------->ATHB12            --------->ARR14(2)       --------->ANAC58        --------->ANAC58  <---------DEAR3(1)  <---------ZAT14  <---------HSFB2a(2)  --------->ANAC58 ---->GT1 <---------ARR11(3)<---------At4g35610            <---------GLK1(2)   <------ZmHOX2a(1) <---   ttatactcacaagctctctctgctatgttcggctcattggtctctcagtctactaaaaccagattctacaagaccacaacaggaacaagcacaaccacaa  1232100  Previous    Next  AGI:  At1g04520.1    Description:  33 kDa secretory protein-related. Identical to Cysteine-rich repeat secretory protein 3 precursor (CRRSP3) [Arabidopsis Thaliana] (GB:Q6NM73;GB:P93806;GB:P93807); similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G33330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81929.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902) Range:  from: 1231577    to: 1234031    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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