Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->YAB1               <---------ICU4              <---------ATHB12            --------->WOX13(1)                       <<<<<<<<<GATA-1      <---------ANAC55(2)                            <<<<<<<<<GATA-4      <---------ANAC55(1)                            <<<<<<<<<GATA-2      --------->ANAC55(1)                            <<<<<<<<<GATA-3      --------->ANAC55(2)                           --------->ARR14(2)                             <-     <-------TEIL                                   ------->TEIL      <----------DOF2           -----   <---------ARR14(2)                            <---------YAB1    <---------ARR11(3)  <---------ALFIN1   --------->ARR14(2)  --------->At4g35610     --------->YAB1      --------->ARR11(3)  --------->AtMYB61 -----YAB1  --------->YAB1               <----------DOF2      --------->AHL20(2)    --------->ANAC46   gaatggatacgtattaatcataatccgatgcaaagtttcaattctttactcatgaatccaccaatttaagagctttcaatctctcaacaccactccgatt  1208300            <---------GLK1(1)            --------->GLK1(1)         <---------YAB1       <---------ICU4      --------->ICU4      <---------YAB1    <--------HAHB4    --------->YAB1                                       <---------AHL20(2)    <---------ICU4                                       <---------YAB1   <---------YAB1                                        --------->AHL20(2)                         -   --------->ICU4                                     <----------DOF2                               <   <---------ATHB12                                 ---------->ID1                                <-- --------->WOX13(1)          <---------AtLEC2   <----------DOF2                                   <-- --------->YAB1          <----------DOF2      ---------->ID1                                   <----- --------YAB1        --------->MYB46(3)      <-----------GT1       <----------DOF2          <-------- ---->AHL20(2)     --------->ANAC46      <---------AHL20(2)  <-----------GT1            <----------DOF2   tattaatcattatgaaatcccaaaccactttgcattacaacattttttttctttttctttttattacaactttgatttcatggaattgttcttttctctt  1208400   <---------ANAC46   <---------ANAC58   <---------ANAC58   <---------bZIP60(2)                         <---------YAB1 ----->ZmHOX2a(1)                        ------->TEIL -----------RAV1(1)                   <---------ANAC55(2)                 --------->ICU4 -------ANAC58                        <---------YAB1          --------->AHL20(1)              ------>ZmHOX2a(1) -------ANAC58    ------>ZmHOX2a(1) --------->YAB1            <---------ARR11(3)          ------>ZmHOX2a(1) -----DOF2        ----------->GT1  <---------ATHB51           <---------AHL20(1)   --------->O2 ---GT1       <-----------GT1      --------->ICU4---------->DOF2 <---------AHL20(2)<---------O2     -   tcctgtcgtggttttttttcctgtaaaacttgaaacaattatgtatgtaatgaaagactaccaatatttttttgtattgatggtctcgtctccttcctct  1208500           --------->ARR14(2)           --------->ARR11(3)                                                                       -           <---------ARR14(2)                                                                       -      --------->LBD16                                                                              --     ----------->GT1                                          <---------WOX13(1)            ---------     --------->ANAC46                                       <------ZmHOX2a(1)               <--------     <---------ANAC55(2)                           --------------->AGL15   --------->ZAT6  --------->ICU4  -------->P   ------>ZmHOX2a(1)                 ---------->ID1   <---------WOX13(1)       <---------ATHB12 -------->MYB46(3)                              <-----------GT1 --------->ATHB12      --------->TOE2(3)   catcaacccgtaaaatcctctcgtcgactagtttttttttgtttttgttttttccccatggaggattgattgagtaaacactacgttgcctcaattatca  1208600                                              <---------AHL20(2)                                          ----------->TBP                                          <---------AHL20(2)                                          --------->AHL20(2)                                        --------->AHL20(2)                                        ----------->TBP                                       --------->AHL20(1)                                       <---------AHL20(1)                                      --------->AHL20(2)                                    --------->AHL20(2) ----->MYB83                      <---------AHL20(2) ----->MYB46(1)                   --------->AHL20(2)     --------->YAB1               <-------------- --------->RAV1(1)              ----------->TBP     --------->At5g28300  --------->DAG2 >YAB1          <---------TOE2(3)--------->YAB1    ----------->GT1      ---------->DOF2      -------- -ICU4          <---------YAB1--------->YAB1----------->TBP--------->AHL20(2)        ---------->ID1 -   ccaacaaaaactcaaaataagattagttctatttataaaaatatatatataaacagtaaaaataaacaccttgaaaaagttttttttgttttttttggta  1208700                                                                                         --------->YAB1                                                                                        <---------YAB1                                                                                      --------->YAB1                                                                                      <---------ICU4                                                                                     --------->ICU4                                                                             -------->ATHB1                                                                             <--------HAHB4                                                                             <---------AHL20(2)                                                                             <---------ICU4          <---------ZAT14                                                    --------->AHL20(2)          <---------ZAT18         ------>MYB83                               --------->ATHB51     <---------ZAT14              ------>MYB46(1)        <----------DOF2    <---------ATHB51 -AGL15   --------->ZAT14       --------->TOE2(3)       <---------DAG2      --------->ICU4 --->GT1  --------->ZAT18       <---------MYB59 <-----------GT1             <---------ATHB12 --------->DOF2                *TSS         <----------DOF2        <----------DOF2 --------->TOE2(3)   aataaagtttagtgctctccctccctcttcgaaacctaatctctctcttttctctctccctttccaattcttttctcaattatttccataatgaaaatca  1208800                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                 --------->ARR11(3)                                ----------->GT1              --------->ARR14(2) <---------ARR11(1)                               ----------->GT1              <---------ARR14(2)<---------CCA1(2)                       --------->At4g35610          <-------TEIL--------->ARR11(3)                     <---------ICU4    --------->GLK1(2)      <---------TOE2(3) ------>ZmHOX2a(2)       <---------ZAT14         <---------At4g35610   atgctatcaaggttcgaattctctgatctcgttcaaatctttgtctggtctggactgtttcaatgtttacagacatctgctaatctgttaaaaaattcca  1208900                                      <------MYB83                                      <------MYB46(1)                                   <---------MYB52(1)                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC55(1)                                 --------->ANAC58                         <-----------ARR10             ---------->ID1   <---------REM1(2)                    ----------->RAV1(2)       --------->ATHB12    ------>ZmHOX2a(1)                       --------->At4g35610     <---------WOX13(1)--------->ARR14(2)                          <---------At4g35610     <--------P <----------DOF2<---------ALFIN1                   --------->GLK1(2)   --------->ATHB12 <---------ANAC58 --------->MYB59             <---------GLK1(2)            ------>ZmHOX2a(1)   <---------MYB46(3)  <---------ARR14(2)                    <---------At5g28300  --------->LBD16 ---  <---------ATHB12  <---------ANAC58<---------MYB55(1)      <-----------GT1     <---------LBD16  ----   ttcaatggttgatttgttcttttcgtttcctctacacgttaggttttggcacattcacagagttacagcatctgaagttctaaccggaaaccattcctcc  1209000          --------->At5g28300      ------>NtERF2     <---------ANAC58                            --------->ARR11(3)                               <--     <---------ANAC58                            <---------ARR11(3)                               <--     <---------RAP2.6(2)                         --------->ARR14(2)                           <------     <---------ETT(2)                            <---------GLK1(2)                         <---------     --------->ETT(2)                            <---------ARR14(2)                       <---------- ------>LBD16            ---------->DOF2       ----------->ARR10                        --------->YAB1 ----->LBD16 ---------->DOF2           --------->REM1(1)                  <---------MYB52(2)  <------   cgagatggcgaccgtgaaaggccttcttaaaggccttcgctacattactcagattttcggtgagtctcatcgactcactaacaagaacaattttaacttt  1209100                                                                                            -------->P                                                                                            ------>MYB83                                                                                            =========                                                                                  ================HOX2a_HOX2a                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                 =================HOX2a_HOX2a                                                                           --------->AtLEC2 ---------                                                                       ==================HOX2a_HOX2a                                                                       <------ZmHOX2a(1)    ------>MYB46(1) -------ANAC58                                                         =================HOX2a_HOX2a -------ANAC58         ------->TEIL                      <---------------------WRI1        ------>ZmHOX2a(1) ----DOF2 <-----------HVH21               --------->GLK1(2)          --------->ANAC58 --------->GLK1(1) --GT1   --------->ANAC58                 --------->ARR11(3)         --------->ANAC58 <---------GLK1(1) -GT1    --------->ANAC46                 <---------ARR11(3)    <----------ID1  --------->ARR14(2)  = ---DAG2 --------->ANAC58  ------->TEIL  --------->RVE1(1)    ---------->DOF2   <---------ARR14(2)  -   tcttgcaatacaagtcacatctctgtatgtatatgaaaacaaaaaatctaattacagacgaagaaaaagacaaggacatgcagatcgggtttcctaccga  1209200  Previous    Next  AGI:  At1g04450.1    Description:  RIC3 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 3). similar to RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT2G33460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83875.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 1208731    to: 1209873    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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