Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------AHL20(2)            <---------------AGL15           ----------------->AGL2           ----------------->AGL3                                         <---------ICU4            < ---------AHL20(2)                                                        --------->ATHB51          < --------AHL20(2)                                                         --------->ATHB12       ---- ------->AHL20(2)---------->DOF2                           <---------AHL20(2)         ----------->GT1 -------WOX13(1)--------->AHL20(2)                  <-----------GT1       <--------ATHB1        <---- ---->ATHB12--------------->AGL15              <---------AHL20(2)        <---------ATHB51      ------ >ATHB12----------->HVH21            <-------GAMYB<---------WOX13(1)     <---------AHL20(2)    <-----   atttatttctatgaccatttaaagaatgtttacaaatgtggttatctatttgattaactatttttttttttttgaataattgggaaaactgtgaaatttt  1201900       ------>NtERF2       ----------->RAV1(1)       <---------RAP2.6(3)      <----------ID1      <---------ETT(1) ---------AHL20(2) ---------ICU4                            ----------->GT1 ----->YAB1                        <---------------AGL15 -----YAB1  ---------->DOF2        --------------->AGL15 --------->AHL20(2) --->AHL20(2) ----------->GT1--------->AHL20(2)        <---------AHL20(2)       ---------->DOF2 ----AHL20(2)--------->DAG2  <---------ATHB51   <-----------GT1    <---------------AtSPL8          --   aataaatgccgacaaaaagtaagaaaaacaaattattctctatatagtatatactattttaaaatatagatggtacagaagtaaaaggcatccaattcga  1202000                                       --------->YAB1                                       --------->ATHB12                                       -------->HAHB4                                <---------ANAC58                                       <---------ICU4                                <---------ANAC58                                      <---------ATHB12                      <---------AHL20(2)             <---------AHL20(2)       --------->ICU4                      <---------YAB1         <---------AHL20(2)           <---------YAB1                    <--------HAHB4       --------->ANAC55(2)           <---------TOE2(3)                  --------->YAB1       <---------ANAC55(2)<---------AHL20(2)             <---------AHL20(2)--------->AHL20(2)  ------       ----------->GT1   --------->AHL20(2) <---------PCF2             <---------YAB1<---------O2 --------->GT1           <---------AHL20(2)----------->HVH21 <-----------RAV1(1)----------->GT1<-----   aagtttaatatgtaatttatacaagaatttaatataactaatgatgggacctattgtttttatttgttgttgtattattatatggtgacttgactaagat  1202100                                                                                                    -                                           --------->TOE1(3)      --------->ALFIN1                  -             --------->YAB1            ---------->DOF2           <-------MYC2                       -            --------->ICU4          ----------->GT1              ------->MYC3                       <          <---------ICU4           --------->DAG2                ------->MYC2                       -          --------->YAB1           <---------TOE1(3)   --------->AHL20(2)                          --       --------->YAB1              <---------TOE2(3) --------------->AGL15                     <----- --->ARR11(3)<---------ICU4      --------->CCA1(2)   --------->TOE2(3)        <---------ZAT14  <----- ----ARR11(3)-------->HAHB4 ---------->DOF2--------->TOE2(3)     <-------MYC3 --------->ZAT14  <-----   gttttcttctaataataatgccaaatgaaaaaaagataaggtaaagcttaatttacataaattagcatgtgggaagagacttcacagtttatacaaataa  1202200                                                                                         --------->LBD16        <---------YAB1                                                                  --------->TOE2(3)     --------->ICU4                                                                     --------->ANAC55(2) -------->ANAC46                                                                        --------->ANAC46 -------->ANAC58                                                                     --------->ARR14(2) -------->ANAC55(2)     <---------DAG2                                               <---------ARR14(2) ---------ANAC55(2)     <----------DOF2                                      --------->LBD16      --- -------->ANAC58       <---------DAG2                 *TSS   <----------DOF2<---------ANAC55(2)   <-- ------->ZAT18      <---------WRKY18(1)        --------->ANAC58             --------->ANAC55(2)  ---- ----------AtSPL3  --------->WRKY38(1)         --------->ANAC58             --------->ANAC46     <--- ----------AtSPL8  --------->WRKY12          --------->CCA1(2)             <---------LBD16    ------- ----ICU4       <---------MYB46(3)          <---------ARR11(3)           <-----------GT1<---------ANAC55(2)   gtacgcaactattagtagttgttgacctttttgtctaattcaacaagataagcctctcttctacttttgtgaaattttccgtaatcaaatccgtaatcag  1202300                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               <-----          <---------ATHB12                                                                     <-----      <---------ATHB12         <----------DOF2                                                 ------ ------>GLK1(1)              --------->LBD16                    <-----------GT1                <----- -------GLK1(1)              ------>NtERF2                 --------->AHL20(2)               <-------- ----->ARR14(2)              <------NtERF2                 <---------AHL20(2)           --------->GLK1(1) ------GLK1(2)           --------->ANAC46 <-----------GT1 --------->AHL20(2)        <------ZmHOX2a(1) -->YAB1--------->WOX13(1)  --------->DEAR3(1)          <----------DOF2             =================   atttccccatcaatcgataattttctctcgccgcgttttctatttttctcgctcttcccttttaattttcatcccattttcttgaaggagatttctaatt  1202400                                                         <---------MYB46(3)              <---------MYB46(3)                                                     <---------YAB1                      <---------REM1(1)                                                     --------->ICU4                    <-------GAMYB                                  ------->TEIL     --------->YAB1                     <------MYB46(1) --->HAHB4                   <---------ANAC58     --------->ICU4                      <---------MYB46(3) -----ICU4                   <---------ANAC58     <---------YAB1            <---------HSFC1(2) -----AHL20(2)               <-------GAMYB      --------->YAB1             ----------->ARR10 <------- ----ATHB51                 <---------MYB46(3) <---------YAB1 <---------ANAC46        <------MYB83 ----ATHB12                 <------MYB83       --------->ICU4--------->ATHB12        <---------AtMYB61 --->ICU4            <----------DOF2         --------->YAB1<--------P      --------->MYB111(1) ----YAB1---------->DOF2    <------MYB46(1) <---------YAB1 <---------WOX13(1)      <---------MYB52(1) -YAB1 ------>ZmHOX2a(2)   <---------AtMYB61--------->ICU4<-------GAMYB    --------->MYB52(2)-------- =============HOX2a_HOX2a  --------->MYB59--------->YAB1<---------YAB1    <--------P --------->MYB59   attctgtgatctaaagtctgaagctttgtttggttgcatctcgatgatgatgatgatgatggttgattgtaaatgggtagtttcggtttggttgtagcag  1202500                                                                                   <-----------GT1                                                                       <---------TOE1(2)                                                                      ------>ZmHOX2a(1)                   --------->YAB1                                    --------->TOE1(2) --At4g35610  --------->AHL20(2)                                     --------->TOE2(2)    <----------DOF2 ->At4g35610----------->GT1                                  <-------TEIL  <------ZmHOX2a(2) --------   aagctaagtttgtcaagttaataagagtattttagttttttttttgttaaatcgatttgtgggttcatcatcctacgatcgaaagtttccatctttgata  1202600                                                            --------->STY1(2)                 <------                  <-----------GT1                       <---------ANAC46                      <------             <---------ARR14(2)                         <---------ANAC58                      -------         --------->LBD16                                <---------ANAC58                     <-------     <---------ARR14(2)                         <-------GAMYB                            --------->AHL20(2)     --------->GLK1(2)               <------------------------ANAC81                     <---------AHL20(2)    <---------GLK1(2)--------->HSFB2a(2)       --------->MYB52(2)                  <---------ANAC46 ->YAB1  <---------LBD16<---------GLK1(2)      <---------MYB46(3)                <---------ANAC46   atttgagattctggggatttttactagaatttctagttttttttttggtttgttgatttcgtagctagaagaaatcgatctaggtgtgtatatatatatc  1202700                               ------>ZmHOX2a(2)                        ----------->RAV1(1)                              <------ZmHOX2a(2)                       <---------ZAT18                             --------->ARR14(2)                       --------->ZAT18 -----GT1                    <---------ARR14(2)            <---------TOE2(3)             <XXXXXXXXXXX ---ARR11(3)                 <---------ARR11(3)            <---------TOE1(3)  --------->YAB1 -->ARR11(3)                 --------->ARR11(3)         <------ZmHOX2a(2)     --------->AHL20(2) --CCA1(2)           --------->ATHB12   ----------->GT1--------->ARR11(3)    <---------ATHB12   tattcaatcgaattttagtgaatcgattggcgatcttggtgagagtaatttcagagagatcaaggttactagagcaccaataaaaacacttatttggatt  1202800  Previous    Next  AGI:  At1g04440.1    Description:  CKL13 (CASEIN KINASE LIKE 13); casein kinase I/ kinase. similar to CKI1 (CASEIN KINASE I), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT4G14340.1); similar to CKL10 (Casein Kinase I-like 10), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT3G23340.1); similar to CKL8 (Casein Kinase I-like 8), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT5G43320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71424.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active si Range:  from: 1202254    to: 1205802    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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