Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ---------->RAV1(1) ----->ANAC58                         ---------->DOF2                  <---------AHL20(2) ----->ANAC58                   --------->ANAC58                <---------TOE2(3) ----->ANAC46                   --------->AtLEC2           ----------->GT1 >ZmHOX2a(1)                    --------->ANAC58          --------->DAG2 -->TOE2(3)                    --------->WOX13(1)        ---------->DOF2 <-----------GT1       ------   agcaacacaaaaaaaaaaaaaaaactttggaatcaagcaaaaaagacaatttcaacaaaaaaagttaagaaatttaaacgagttagagatggaaacagac  1183300                         --------->ANAC58                         --------->ANAC58                  <---------MYB46(3)          --------->At4g35610                  <-----------RAV1(1)         <---------At4g35610                         <---------ZAT18                <---------At4g35610     <---------TOE2(3)                                 --------->ZAT14                --------->At4g35610     --------->ANAC58                    ------->TEIL  <---------ZAT14               --------->MYB52(2)       --------->ANAC58                   <---------CCA1(2)     <---           <---------MYB46(3)        <---------ATHB12         --------->ANAC58        ---------------       <---------YAB1    --------->ANAC46  ---------->DOF2    --------->ANAC58        --------------- --->ARR11(3)<---------MYB52(1)    --------->WOX13(1)         --------->ANAC46        --------->ZAT6   cttgataagacgattgttagctgttgcacgagaaaaacaatcaaggaaagctgaaatcgacttcacgacatgtctctgtatctcaatatcagtacacttc  1183400                                        --------->TOE2(3)                                       --------->MYB46(3)                                      --------->ANAC58                                      --------->ANAC58                                     ------->GAMYB                                    --------->MYB46(3)                                    <---------MYB55(2)                                    <---------MYB111(2)                                    <---------MYB111(1)                              --------->ANAC58                              --------->ANAC46                        ----------->GT1 ------ALFIN1                 --------->ANAC58     <---------LBD16  --------->DAG2 >AtSPL8               --------->TOE1(3)--------->YAB1             ---------->DOF2   --------->AHL20(2) >AtSPL3<----------DOF2--------->TOE2(3)------->GAMYB <------ZmHOX2a(1)              <---------AHL20(2)   cacttcttctctttctcatcacaaaccctaacaagccaacaaccaaaattttctcaggaaacaaattcaaaaagggaaaacagcaaattaaacatcgaga  1183500                             --------->ANAC58                        ----------->RAV1(2)               <---------DEAR3(1)                       --                        --------->At4g35610               <---------AtMYB61              <-----------GT1                       --------->ARR14(2)                 --------->ALFIN1               <---------ARR14(2)                 --------->DAG2             ----------->GT1<---------MYB46(3)            --------->ARR14(2)                ---------->DOF2   --------->ICU4       <---------DEAR3(1)          --------->ALFIN1--           ----------->GT1   --------->ANAC58     ---------->DOF2                  <---------AtMYB61       ---------->DOF2 <---------ARR14(2)   <---------ANAC58                   --------->ZAT18   <---       <---------ZAT14<------ZmHOX2a(1)     <---------ANAC58                --------->ALFIN1 ------>ZmHOX2a(1)   gattgagagtaaagagcaaaaagaggacctgaagccaagattgagagcgtgataaagacggtggtgaagagtattgatgtgggcagtggtgtttcctccc  1183600                    --------->DEAR3(1)                   <---------LBD16                   <------NtERF2                  ------>NtERF2                  <---------RAP2.3(1)                 <---------ETT(2)                 --------->ETT(2)           --------->ARR14(2)           <---------ARR11(1)           <---------ARR11(3)           <---------ARR14(2)          <---------CCA1(2)      ------>NtERF2--------->ATERF1(1)     --------->ANAC46     --------->ANAC58                                                             --------->bZIP60(2)     --------->bZIP60(1)     <---------ANAC58                                     --------->ANAC58     <---------bZIP60(1)     <---------ANAC58                                     --------->ANAC46     --------->ANAC58--------->LBD16                   <---------ARR14(2)     --------->CCA1(2)   <---------ATERF1(1)<------NtERF2                    --------->ARR14(2) <---------WOX13(1) --------->HVH21 <---------DEAR3(1)           <---------WRKY18(1)  ------->GAMYB  --------->ANAC58 ------->WRKY12<-----------HVH21             ----------->HVH21  --------->MYB52(1)----------->HVH21 -------DOF2  <-----------RAV1(1) <---------YAB1   <---------MYB52(1)   --------->ATHB12   tttgacgacgccatatctgtcgccggagttttcgttctgactgaaaattgaccggtggatttgatacaacggagtgattgatacacgacacagagagacc  1183700                                                                                                    -                                                                                               ------                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                  <---------AHL20(2)<                                   <----------DOF2                                --------->AHL20(2)-            --------->YAB1     <---------TOE2(3)                                 --------->AHL20(2) <   *TSS    <---------YAB1----------->TBP                                      --------->YAB1   ------ <----------DOF2         --------->AHL20(2)                              ------------>CBF      ------ ------>ZmHOX2a(1)     <----------DOF2                       <-----------GT1  --------->AHL20(2)-----   gtcctttgattttttgataatgggcctttaaataaggctttctcttccaaactaattcgcatatttctattcccaaacaattataaaattaataaacccg  1183800                                                         <---------ZAT6   --------->ICU4                                        ----------->GT1              <---------ZAT18 --------->AHL20(2)                                    <---------ANAC46           <---------YAB1 -------->ICU4      --------->ANAC58            <---------AHL20(2)              <---------ICU4 --->ANAC46         --------->ANAC58            --------->AHL20(1)              <--------HAHB4 ---------ATHB51    --------->ANAC46            --------->AHL20(2)             --------->ICU4 -------->AHL20(2)  <---------ANAC55(2)        --------->AHL20(2)         --------->YAB1 ---------AHL20(2)  --------->ANAC55(1)        <---------AHL20(2)       <-----------GT1 --->ANAC58         --------->ANAC55(2)   ------>ZmHOX2a(1)           --------->AHL20(2)   <---------ICU4 --->ANAC58    --------->YAB1            --------->TOE2(3)            <---------AHL20(2)  <---------ATHB12 ---->LBD16    <---------ICU4            --------->TOE1(3)  <---------ZAT14    <---------YAB1     ---   aaataatttttaaaaaatcatcacgcaattcaaaaaatgttttccttaaaaaaattgtagtgtaaactgaaatttatcagcattattatgcactcatttc  1183900                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                     <---------STY1(2)                                                                                <---------WRKY18(1)                                        --------->ANAC58                       --------->WRKY12                                        <---------ALFIN1                       --------->WRKY45                                        --------->ANAC58<---------YAB1         --------->WRKY38(1)      --------->AHL20(2)    ----------->GT1        <---------ARR11(3)        <-------GAMYB <---------YAB1             <---------ZAT6         --------->ARR11(3)    <---------At4g35610   ------ --->ZmHOX2a(1) ---------->DOF2  ---------->DOF2  <---------CCA1(2)--------->AHL20(2)--------->STY1(2)   cttatgaataaaatcagtaaaagaaatttagagttaaaagacacacattcacatatctatgtttgaacattatttagctcgttgactagcttgaagaaaa  1184000             ------->MYC3             <-------MYC3           <---------TOE2(2)                          --------->LBD16           <---------TOE1(2)                        <---------LBD16      ------->GAMYB                           --------->TOE2(3)     <---------MYB52(2)                     <-------TEIL     --------->MYB46(3)             <-----------RAV1(2)                                            >>   --------->MYB52(1) <----------DOF2  <------ZmHOX2a(1)                                   --------->ALFIN1 ---->DOF2<---------ALFIN1  <---------ICU4 --------->CCA1(2)                             --------->ALFIN1   agagacaacgacccacgtttatgtctttaatctttataacaggagatacatcaaaccggagggagaagaagttgtttgagtcttaacaagagtgtgtgag  1184100                            <---------ZAT6                        --------->ICU4                        ---------->DOF2                <------ZmHOX2a(2)                          ----------->GT1                         <-               <---------ARR14(2)                       <---------ZAT6        <---------TOE1(3)  ----               --------->ARR11(3)                   <---------YAB1       <---------ZAT6 <---------YAB1 --------->TOE2(3) ----------->GT1               --------->ICU4      <---------ZAT14    <---------ATHB12 >>>>>>>MYB98 --------->GLK1(1)                  <---------YAB1--------->DAG2 <---------TOE2(3)<-----   taacataaatacaaggagatcgagtaattagtgtgagcatcatcttaagagattattagtgttgtaaagtgttcagagttaagtttactaatgaatgaat  1184200  Previous    Next  AGI:  At1g04390.1    Description:  binding / protein binding. similar to At1g04390-like protein [Arabidopsis lyrata] (GB:ABY75920.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 1179362    to: 1183703    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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