Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ------>ZmHOX2a(2)               --------->MYB46(3)                                   ======================HOX2a_HOX2a                                  <------ZmHOX2a(2)           --------->ANAC46                                  =======================HOX2a_HOX2a                                 --------->AGP1               --------->AtLEC2                                 --------->ARR14(3)        <-------TEIL                     --------->ANAC46                      ------>ZmHOX2a(2)               <---------ANAC58  <---------ARR14(2)       <------ZmHOX2a(2)               <---------ANAC58  --------->ARR11(3)      --------->ARR14(2)             <-----------GT1     <---------ARR14(3)      <---------ARR14(2)          <---------ICU4         --------->ARR14(2)  ------>ZmHOX2a(2)   ---------->DOF2         --------->AHL20(2)      <---------ARR11(3)  <---------LBD16   --------->ANAC58         <---------AHL20(2)     --------->GLK1(1)  --------->ARR14(2)  --------->ANAC58       -------         --------->AHL20(1)     <---------GLK1(1)  <---------ARR14(2)--------->MYB52(1)       <------        --------->AHL20(2)     ----------->ARR10  <------ZmHOX2a(1)<---------MYB52(2)         -------  --------->YAB1     --------->ANAC58             ===============HOX2a_HOX2a              -------->P <---------ATHB12    --------->ANAC58             ================HOX2a_HOX2a<---------GLK1(2)<------   tcaatgaaaaaaaaattacctgcaagccactgggagatcttcagggtttgaaggatcgggatccatgtaacaaacgaaagagtctctccagttaccagca  1178000                                                                                 =============HOX2a_HOX2a                                                                                 <---------HSFB2a(1)                                                                                 --------->HSFB2a(1)                                                                                 --------->HSFC1(2)                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR14(2)                                                                                <---------ARR14(3)                                                                                <---------ARR11(3)                                                                                --------->ARR14(2)                                                                                --------->ARR11(3)                                                                                <---------ARR11(1)                                                                                <-----------ARR10                                                                                --------->ARR14(3)                                                                               <---------CCA1(2)                           <--------P                                          <---------ARR14(1)                   <---------ICU4                                             --------->LBD16                   --------->ATHB12                --------->ANAC58          --------->HSFB2a(2)                   --------->ATHB51                --------->ANAC58         <---------LBD16       ---------->DOF2  <---------TOE2(3)        ---------->DOF2 <---------GLK1(1)                ---    ----------->GT1-------->ATHB1               --------->WRKY18(1) --------->TOE2(3)             --- -->ZAT2          <---------AHL20(2)           <-----------HVH21<---------ARR11(3)                --- ---ZAT2          --------->ICU4              <---------bZIP60(1)--------->GLK1(1)     ------>ZmHOX2a(1) -->At4g35610     <---------YAB1             <---------AtMYB61  --------->ARR11(3)------>ZmHOX2a(2) - ---At4g35610     <---------ATHB51      <---------AtMYB61 ----------->GT1--------->MYB46(3)     <----   gacgaactgtaaagttcgaaattattgtggtagataaatgttttggtgaggtcaagcgagaagtaagatttcttaacctccggatcttcctcatgaaacc  1178100                                                                                         <---------ARR11(3)                                                                             <---------ZAT2                                                              --------->KAN4(2)          --------->ARR11(3)                                                             <---------HSFB2a(1)       ----------->ARR10                                                             --------->HSFB2a(1)     ----------------                                                        --------->HSFB2a(2)  --------->ZAT2------>ZmHOX2a(2)                                                       <---------LBD16       --------->At4g35610                                                      ----------->RAV1(2)    --------->ZAT14 ------>MYB52(1)                                      --------->At4g35610    <---------ZAT14 --->MYB46(1)                                --------->ATHB12--------->HSFC1(2) --------->At4g35610 --->MYB83                                   <---------MYB46(3)    --------->LBD16   <----------DOF2 -------->MYB46(3)    --------->HSFB2a(2)   <---------YAB1   <---------HSFC1(2) <---------At4g35610 - -----MYB59   ------->TEIL      ---------->DOF2<--------P----------->GT1     <---------At4g35610 ----   taacaactccattttgaatctcttcaagaacacttaaaggaacaccatggttgatcacctggaaaattccccaattctctgcagcggctttgatcttctc  1178200                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58                                                               --------->MYB111(1)          --------->O2                                         --------->MYB46(2)          <---------O2  <---------ATERF1(1)                    --------->MYB59          --------->ANAC46                                    <--------P          --------->ANAC58                 <------MYB83       <---------MYB55(1)          --------->ANAC58                 <------MYB46(1)--------->LBD16              <---------HSFB2a(2)          --------->ANAC55(2)             <---------------AtSPL3<------MYB46(1)      --------->At4g35610       <---------REM1(2)------>NtERF2     <---------------AtSPL8<------MYB83         ----------->RAV1(2)      <-----------HVH21--------->ANAC58   --------->MYB59<---------TOE2(1)           <---------At4g35610 --------->RAP2.6(3)   --------->ANAC58--------->ATHB12  <---------TOE1(1)      <---------TOE2(3) ----->WRI1 ----------->HVH21 ---------->DOF2         <---------ARR14(2)        --------->ANAC46 -------->MYB52(1)  <---------ZAT18    --------->YAB1 --------->ARR14(2)  <---------ANAC46  <------ZmHOX2a(1) ----->ANAC46  <---------ANAC46       <---------YAB1  --------->GLK1(2)  ---------->ID1--------->HSFB2a(2)   cacaacggcttcacgcgacttgtggacgcctgcaaagtcgatgataggtactgcaaaatccgaggtaggtttcttgtcgtctaaggcatctggaggaagg  1178300              --------->TOE2(3)             --------->HSFB2a(1)             <---------HSFC1(2)             <---------HSFB2a(1)             --------->HSFC1(2)           --------->ARR14(2)                                             <---------ALFIN1           <---------ARR14(2)        --------->At4g35610                 --------->MYB46(3)          <------ZmHOX2a(1)          <---------At4g35610               <-----------GT1       <------ZmHOX2a(1)        <---------ANAC58                     <-----------GT1                <    --------->CCA1(2)           <---------ANAC58              ------>ZmHOX2a(2)                <-----   ccaaagataggaggaaccttggtctcttccaaagacttgcgctcactctgagagttgaatttgatcgagtttttcaccaccatttttgtgttttgtttat  1178400                                                                                         --------->ALFIN1                       <---------ZAT2                                                   ------->MYC3                       <---------At4g35610                                              <-------MYC3         <-----------GT1                           <------------CBF                    <---------ANAC46      *TSS    --------->ANAC46                   --------->ARR11(3)           ---------->DOF2     ---      <---------AHL20(2)   <---------ANAC46   --------->YAB1      --------->CCA1(2)    <---------O2 ----------DOF2     ---------->DOF2      ------------>CBF    ---------->DOF2--------->MYB46(3)   <--- ------GT1   ------>ZmHOX2a(1)          --------->YAB1    >>>>>>>>>TBF1   ----------->RAV1(1)    ----   ctctttatttttttcctcacaacaaagctgcttatgtagcaaacacaataagaaattgaagaagaaagagatgaggcaacaaaagagaaacgtggagaag  1178500                                                                                      <------NtERF2                                                                                     <---------At4g35610                                                                               <---------ANAC58                                                                               <---------bZIP60(2)                                                                               <---------ANAC58 -----                                                                               <---------ANAC55(2)                                                                               <---------ANAC46------                                                                               --------->ANAC55(2)                                                                               <---------O2--------->YAB1                                                    <------MYB83               <---------ANAC55(1)                                           <-------TEIL <----------DOF2 <----------DOF2----------->GT1 --------->AtLEC2                         --------->CCA1(2)         <------MYB46(1) --------->TCP20 ------>WRKY18(1)                 <----------ID1    <------MYB46(1)<---------AtMYB61--------->TCP16(1) --------HVH21                  ---------->DOF2    <---------AtMYB61<------MYB83 --------->ALFIN1   < ----->ARR11(3)               --------->YAB1       --------->MYB59 --------->MYB59  <---------PCF2  <   gtcatgcgaaaaacgagaagcgttacagactataaaaagacaagattcagagtttggtcttttcagagtttggtctttgttacgtggagccgataatatg  1178600           --------->TOE1(3)       ---------->DOF2    <---------ANAC46    <---------ANAC58    --------->ANAC58    <---------ANAC55(1)    <---------ANAC58                              <---------WOX13(1)    --------->ANAC58                            --------->ATHB12    <---------ANAC55(2)                     <-----------GT1                                       ---    --------->ANAC55(2)                --------->TOE2(3)                                        <---- <---------MYB52(1)                    --------->TOE1(3)                                    --------- ------->MYB.PH3(1)                  <---------TOE2(3)            --------->YAB1            --------- ----->HVH21                         <---------TOE1(3)  --------->ZAT14               --------->YAB1 -------GAMYB                       <-----------GT1     <---------ZAT14    <------ZmHOX2a(2)<-------- -----------HVH21       <---------MYB52(1) <---------YAB1     --------------->AGL15 ----------->GT1 -   accgttacgtaaagcttaaaatgtccgtttcgacttattaacgttataactgattgagttcagtccaataagagtagatcaaaaactagtataactttaa  1178700     --------->CCA1(2)          --------->AtLEC2 ------>YAB1                  <---------ANAC58 -----TOE2(3)                 <---------ANAC58 >TOE2(3)               <----------DOF2   --------->AHL20(2) >TOE1(3)              <---------ANAC58<------ZmHOX2a(1)         <---------YAB1 --DOF2                <---------ANAC58----------->GT1         --------->YAB1        --------->YAB1 --------->DOF2    <----------DOF2    ----------->GT1      ------>ZmHOX2a(1)<-------TEIL   tgaaaagatagaagtgtttttctttgctttgttcgtgcaaaggataaaataaacttctatcctatttataaataagcatacatacaagaatcacacaaac  1178800                          <--------ATHB1                          -------->HAHB4                          <---------ICU4                          --------->ATHB12                          --------->ATHB51                         <---------ATHB51                         <---------AHL20(2)                       ------>MYB46(1)                       ------>MYB83                     ------->GAMYB                    --------->MYB46(3)                   ------>MYB83                                                  --------->ANAC58                   -------->P                                                    --------->ANAC46                   ------>MYB46(1)                                  <---------ARR11(3)                 --------->AtMYB61                                  --------->ARR11(3)                --------->MYB46(3)                                <---------AHL20(2)               >>>>>>>>>>MYB80                                --------->YAB1     --------->ANAC58              <-----------GT1                          --------->ANAC58         <---------ZAT18         ----------->GT1 --------->ICU4                --------->ANAC46         --------->ZAT18     <        <---------TOE2(3)<---------ATHB12              --------->ANAC58        --------->ALFIN1 -----        <---------TOE1(3)--------->AHL20(2)  --------->AHL20(2)  --------->AHL20(2)       <----------DOF2   atctaatttgaaggttaaaccaaccaaataattgaaaaatccatagataatataaacacaccatttataaaatcttgtaatgtgcgccatagcttttgta  1178900  Previous    Next  AGI:  At1g04380.1    Description:  2-oxoglutarate-dependent dioxygenase, putative. similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT1G04350.1); similar to At1g04380-like protein [Arabidopsis lyrata] (GB:ABY74061.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 1176920    to: 1178406    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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